Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 2.1e-166 589.0 304 100.0
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 1.8e-165 585.9 304 99.7
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 2.7e-129 465.7 304 79.3
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 3.3e-127 458.8 302 77.8
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 1.7e-126 456.4 305 78.4
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 9.1e-125 450.7 304 76.3
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 4.5e-124 448.4 298 76.8
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 7.7e-124 447.6 306 74.8
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 7.2e-122 441.0 300 76.0
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 9.4e-122 440.7 307 75.9
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 1.6e-121 439.9 303 74.9
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 4.0e-120 435.3 303 74.3
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 2.0e-119 433.0 306 75.8
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 2.0e-119 433.0 310 72.3
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 3.4e-119 432.2 302 74.2
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 3.4e-119 432.2 303 74.6
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 9.7e-119 430.6 298 74.5
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 1.3e-118 430.3 299 74.2
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 2.8e-118 429.1 300 74.7
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 3.7e-118 428.7 305 74.4
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 3.7e-118 428.7 300 74.7
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 6.3e-118 427.9 302 74.2
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 1.1e-117 427.2 298 74.5
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 1.1e-117 427.2 300 74.3
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 1.4e-117 426.8 299 73.9
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 2.4e-117 426.0 299 74.2
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 3.1e-117 425.6 300 73.7
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 4.1e-117 425.2 305 74.8
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 3.5e-116 422.2 351 65.0
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 5.9e-116 421.4 299 71.9
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 2.2e-115 419.5 301 71.8
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 6.5e-115 417.9 295 72.9
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 8.5e-115 417.5 300 72.7
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 8.5e-115 417.5 300 72.7
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 1.1e-114 417.2 300 72.3
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 1.5e-114 416.8 300 73.7
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 2.5e-114 416.0 300 73.3
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 2.5e-114 416.0 300 72.3
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 2.5e-114 416.0 294 74.1
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 4.2e-114 415.2 304 73.0
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 5.5e-114 414.8 300 73.0
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 1.2e-113 413.7 300 72.7
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 1.6e-113 413.3 295 72.5
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 1.6e-113 413.3 303 71.3
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 2.7e-113 412.5 316 69.3
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 2.7e-113 412.5 304 70.7
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 2.7e-113 412.5 299 71.2
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 3.6e-113 412.1 316 69.3
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 4.7e-113 411.8 304 70.7
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 1.8e-112 409.8 300 74.7
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 3.0e-112 409.1 308 71.1
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 8.8e-112 407.5 282 73.4
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 7.5e-111 404.4 303 71.9
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 1.3e-110 403.7 300 72.7
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 2.2e-110 402.9 302 70.2
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 3.7e-110 402.1 336 67.0
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 1.1e-109 400.6 299 70.6
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 1.4e-109 400.2 282 74.8
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 7.0e-109 397.9 317 66.9
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 9.1e-109 397.5 370 60.3
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 2.7e-108 396.0 305 69.8
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 1.3e-107 393.7 316 68.0
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 3.8e-107 392.1 342 62.9
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 4.2e-106 388.7 305 69.2
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 4.7e-105 385.2 304 69.1
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 4.7e-105 385.2 338 63.9
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 4.0e-104 382.1 300 69.3
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 5.2e-104 381.7 298 69.5
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 6.8e-104 381.3 286 71.7
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 8.9e-104 380.9 372 57.5
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.2e-103 380.6 294 69.4
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 2.0e-103 379.8 302 66.9
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 3.4e-103 379.0 279 73.5
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 3.4e-103 379.0 272 72.4
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 6.3e-102 374.8 293 68.9
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 6.3e-102 374.8 293 68.9
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 5.4e-101 371.7 304 66.1
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 2.0e-100 369.8 256 75.0
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 2.7e-100 369.4 293 67.9
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 2.5e-98 362.8 256 74.2
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 7.3e-98 361.3 319 63.0
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 2.1e-97 359.8 255 72.5
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 1.5e-95 353.6 261 70.5
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 4.4e-95 352.1 314 65.0
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 5.8e-95 351.7 310 64.2
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 3.7e-94 349.0 327 60.2
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 7.0e-93 344.7 254 70.9
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 1.6e-92 343.6 252 71.4
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 1.3e-91 340.5 261 71.6
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 2.3e-91 339.7 373 54.2
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 3.9e-91 339.0 298 64.1
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 3.9e-91 339.0 292 64.7
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 1.9e-90 336.7 245 72.7
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 1.2e-89 334.0 235 71.5
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 1.6e-89 333.6 301 62.8
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 1.6e-89 333.6 207 80.2
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 5.2e-88 328.6 208 77.9
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 3.4e-87 325.9 205 77.6
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 1.7e-86 323.6 293 61.8
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 1.1e-85 320.9 262 65.3
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 1.4e-85 320.5 230 73.5
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 3.2e-85 319.3 318 57.9
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 1.0e-83 314.3 300 60.7
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 3.0e-83 312.8 257 65.4
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 9.5e-82 307.8 184 83.7
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 9.5e-82 307.8 325 53.8
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 8.1e-81 304.7 246 67.9
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 1.4e-80 303.9 250 67.6
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 2.6e-79 299.7 291 55.3
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 6.4e-78 295.0 254 63.4
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.1e-77 294.3 255 65.1
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.9e-77 293.5 292 57.2
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 2.3e-75 286.6 244 64.8
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 3.0e-75 286.2 207 72.9
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 1.4e-72 277.3 268 60.8
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 2.6e-71 273.1 290 55.9
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 7.1e-69 265.0 246 58.5
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 9.3e-69 264.6 190 67.4
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 1.0e-67 261.2 165 78.8
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 4.0e-64 249.2 342 45.3
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.2e-63 247.7 274 54.0
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 6.4e-62 241.9 155 80.0
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 1.7e-59 233.8 154 75.3
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 3.1e-48 196.4 130 77.7
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 5.9e-31 139.0 120 62.5
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 2.5e-29 133.7 301 34.2
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 1.1e-21 108.2 188 37.8
VMungo1148G0001 Vigna mungo HOM05D005817 ORTHO05D007140 6.1e-20 102.4 78 70.5
PRCOL_00002712 Prasinoderma coloniale HOM05D005817 ORTHO05D007140 3.1e-16 90.1 329 28.6
SEGI_07435 Sequoiadendron giganteum HOM05D005817 ORTHO05D007140 5.5e-13 79.3 115 46.1
FvH4_3g40414 Fragaria vesca HOM05D005817 ORTHO05D007140 3.0e-11 73.6 60 58.3
CARHR145100 Cardamine hirsuta HOM05D005817 ORTHO05D007140 9.7e-10 68.6 86 48.8
Thhalv10005196m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 6.3e-09 65.9 52 67.3
Lalb_Chr12g0195851 Lupinus albus HOM05D005817 ORTHO05D007140 6.3e-09 65.9 57 61.4
COL.COLO4_38165 Corchorus olitorius HOM05D011921 ORTHO05D160408 4.5e-07 59.7 181 30.9


User provided reference genes

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