Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027654.1 Olea europaea HOM05D005218 ORTHO05D006657 4.6e-169 597.8 303 100.0
MSTRG.5474 Avicennia marina HOM05D005218 ORTHO05D006657 4.1e-125 451.8 285 77.5
Migut.J00001 Erythranthe guttata HOM05D005218 ORTHO05D006657 2.6e-124 449.1 296 75.0
Dinv16915 Davidia involucrata HOM05D005218 ORTHO05D006657 4.5e-124 448.4 285 77.9
CAN.G455.1 Capsicum annuum HOM05D005218 ORTHO05D006657 1.4e-122 443.4 302 74.5
CSS0045446 Camellia sinensis var. sinensis HOM05D005218 ORTHO05D006657 3.2e-122 442.2 295 73.6
Nitab4.5_0003037g0020 Nicotiana tabacum HOM05D005218 ORTHO05D006657 5.5e-122 441.4 295 75.3
Ciclev10011748m.g Citrus clementina HOM05D005218 ORTHO05D006657 7.2e-122 441.0 285 75.4
Peaxi162Scf00374g00623 Petunia axillaris HOM05D005218 ORTHO05D006657 7.2e-122 441.0 295 75.6
Nitab4.5_0002139g0070 Nicotiana tabacum HOM05D005218 ORTHO05D006657 9.4e-122 440.7 295 74.9
Hma1.2p1_1020F.1_g248500 Hydrangea macrophylla HOM05D005218 ORTHO05D006657 1.6e-121 439.9 295 73.9
Hma1.2p1_1020F.1_g248520 Hydrangea macrophylla HOM05D005218 ORTHO05D006657 1.6e-121 439.9 295 73.9
Solyc10g074690.2 Solanum lycopersicum HOM05D005218 ORTHO05D006657 2.1e-121 439.5 295 74.9
Gohir.A02G000400 Gossypium hirsutum HOM05D005218 ORTHO05D006657 6.1e-121 438.0 295 74.2
Cc06_g00030 Coffea canephora HOM05D005218 ORTHO05D006657 7.9e-121 437.6 295 73.2
Sopen10g027170 Solanum pennellii HOM05D005218 ORTHO05D006657 3.9e-120 435.3 295 74.2
CANSAT21G2189 Cannabis sativa HOM05D005218 ORTHO05D006657 6.7e-120 434.5 285 74.4
Gorai.005G001100 Gossypium raimondii HOM05D005218 ORTHO05D006657 8.8e-120 434.1 295 73.6
Gohir.D02G000700 Gossypium hirsutum HOM05D005218 ORTHO05D006657 1.1e-119 433.7 295 73.2
Rhsim04G0119400 Rhododendron simsii HOM05D005218 ORTHO05D006657 1.1e-119 433.7 295 73.6
GSVIVG01029830001 Vitis vinifera HOM05D005218 ORTHO05D006657 1.5e-119 433.3 295 72.5
COL.COLO4_20050 Corchorus olitorius HOM05D005218 ORTHO05D006657 5.7e-119 431.4 295 72.5
Duzib268G1588 Durio zibethinus HOM05D005218 ORTHO05D006657 5.7e-119 431.4 295 72.5
QL07p030634 Quercus lobata HOM05D005218 ORTHO05D006657 7.4e-119 431.0 303 69.6
Thecc.04G061600 Theobroma cacao HOM05D005218 ORTHO05D006657 7.4e-119 431.0 295 72.2
Cfa016978 Carpinus fangiana HOM05D005218 ORTHO05D006657 1.3e-118 430.3 295 70.8
QL07p030229 Quercus lobata HOM05D005218 ORTHO05D006657 1.3e-118 430.3 295 71.2
Manes.08G165900 Manihot esculenta HOM05D005218 ORTHO05D006657 1.7e-118 429.9 285 73.7
TAR369G0292 Trochodendron aralioides HOM05D005218 ORTHO05D006657 4.8e-118 428.3 284 74.6
Manes.09G119600 Manihot esculenta HOM05D005218 ORTHO05D006657 1.4e-117 426.8 295 70.8
arahy.Tifrunner.gnm1.ann1.6F524X Arachis hypogaea HOM05D005218 ORTHO05D006657 1.8e-117 426.4 295 71.5
Atru.chr8.19_Atru.chr8.20 Acer truncatum HOM05D005218 ORTHO05D006657 4.1e-117 425.2 295 71.2
Lsat_1_v5_gn_8_108900 Lactuca sativa HOM05D005218 ORTHO05D006657 7.0e-117 424.5 296 72.6
arahy.Tifrunner.gnm1.ann1.M7CUXC Arachis hypogaea HOM05D005218 ORTHO05D006657 1.2e-116 423.7 295 71.2
TWI74G0252 Tripterygium wilfordii HOM05D005218 ORTHO05D006657 1.2e-116 423.7 285 73.0
Eucgr.K01318 Eucalyptus grandis HOM05D005218 ORTHO05D006657 3.5e-116 422.2 295 70.2
Sc02g0000100 Simmondsia chinensis HOM05D005218 ORTHO05D006657 7.7e-116 421.0 295 69.2
TWI77G0041 Tripterygium wilfordii HOM05D005218 ORTHO05D006657 1.0e-115 420.6 295 71.5
HanXRQChr14g0445831 Helianthus annuus HOM05D005218 ORTHO05D006657 3.8e-115 418.7 299 71.2
Lj2A53G27 Lonicera japonica HOM05D005218 ORTHO05D006657 3.8e-115 418.7 302 70.9
Nn5g26729 Nelumbo nucifera HOM05D005218 ORTHO05D006657 3.8e-115 418.7 295 69.8
Prupe.6G300700 Prunus persica HOM05D005218 ORTHO05D006657 1.1e-114 417.2 296 68.9
Ca_23103_v3 Cicer arietinum L. HOM05D005218 ORTHO05D006657 3.2e-114 415.6 295 69.5
Glyma.16G222300 Glycine max HOM05D005218 ORTHO05D006657 3.2e-114 415.6 295 69.5
MD12G1196200 Malus domestica HOM05D005218 ORTHO05D006657 3.2e-114 415.6 296 69.3
ECA236G4239 Erigeron canadensis HOM05D005218 ORTHO05D006657 5.5e-114 414.8 293 71.3
DCAR_023955 Daucus carota HOM05D005218 ORTHO05D006657 9.4e-114 414.1 293 71.7
Phvul.010G060400 Phaseolus vulgaris HOM05D005218 ORTHO05D006657 1.6e-113 413.3 295 68.8
PGR004G2278 Punica granatum HOM05D005218 ORTHO05D006657 2.1e-113 412.9 295 69.5
VMungo0331G1207 Vigna mungo HOM05D005218 ORTHO05D006657 2.1e-113 412.9 295 69.2
ECA248G3767 Erigeron canadensis HOM05D005218 ORTHO05D006657 2.7e-113 412.5 291 71.1
MD04G1181300 Malus domestica HOM05D005218 ORTHO05D006657 3.6e-113 412.1 286 69.9
unitig_699.g19018 Utricularia gibba HOM05D005218 ORTHO05D006657 1.8e-112 409.8 295 69.2
Glyma.03G000700 Glycine max HOM05D005218 ORTHO05D006657 3.0e-112 409.1 299 68.6
Aqoxy2G00608 Aquilegia oxysepala HOM05D005218 ORTHO05D006657 4.0e-112 408.7 295 69.5
HanXRQChr11g0329321 Helianthus annuus HOM05D005218 ORTHO05D006657 4.0e-112 408.7 291 71.1
Hund19374 Selenicereus undatus HOM05D005218 ORTHO05D006657 5.2e-112 408.3 285 69.1
TPR.G30733 Trifolium pratense HOM05D005218 ORTHO05D006657 2.0e-111 406.4 297 68.0
Potri.016G143700 Populus trichocarpa HOM05D005218 ORTHO05D006657 3.3e-111 405.6 286 70.6
Ah.04g166670 Amaranthus hybridus HOM05D005218 ORTHO05D006657 1.3e-110 403.7 295 67.5
Aa31LG5G11280 Aethionema arabicum HOM05D005218 ORTHO05D006657 2.2e-110 402.9 283 70.0
Lj3g0026233 Lotus japonicus HOM05D005218 ORTHO05D006657 2.2e-110 402.9 293 67.9
MBI15_g33472_MAGBIO Magnolia biondii HOM05D005218 ORTHO05D006657 6.3e-110 401.4 293 67.9
RcHm_v2.0_Chr3g0459311 Rosa chinensis HOM05D005218 ORTHO05D006657 1.1e-109 400.6 296 68.2
CsaV3_4G013540 Cucumis sativus L. HOM05D005218 ORTHO05D006657 1.8e-109 399.8 295 67.8
Thhalv10013603m.g Eutrema salsugineum HOM05D005218 ORTHO05D006657 1.8e-109 399.8 283 69.3
Sp6g41230 Schrenkiella parvula HOM05D005218 ORTHO05D006657 1.8e-109 399.8 283 69.3
MELO3C025278.2 Cucumis melo HOM05D005218 ORTHO05D006657 2.4e-109 399.4 295 68.1
ClCG04G005100 Citrullus lanatus HOM05D005218 ORTHO05D006657 3.1e-109 399.1 295 67.5
Sed0017962 Sechium edule HOM05D005218 ORTHO05D006657 3.1e-109 399.1 295 68.1
SGA_v2.0_scaffold85G26585 Striga asiatica HOM05D005218 ORTHO05D006657 3.1e-109 399.1 386 56.2
THA.LOC104816146 Tarenaya hassleriana HOM05D005218 ORTHO05D006657 3.1e-109 399.1 283 68.9
CARHR212360 Cardamine hirsuta HOM05D005218 ORTHO05D006657 5.3e-109 398.3 283 68.6
Lalb_Chr13g0290271 Lupinus albus HOM05D005218 ORTHO05D006657 5.3e-109 398.3 297 68.7
BNapus_Darmor_BZH_scaffold_209p00020 Brassica napus HOM05D005218 ORTHO05D006657 7.0e-109 397.9 283 68.9
Sabra06G0088900 Salix brachista HOM05D005218 ORTHO05D006657 7.0e-109 397.9 298 66.8
AL6G10010 Arabidopsis lyrata HOM05D005218 ORTHO05D006657 1.6e-108 396.7 283 68.9
PSO384G1586 Papaver somniferum HOM05D005218 ORTHO05D006657 2.7e-108 396.0 287 66.9
Sabra04G0159600 Salix brachista HOM05D005218 ORTHO05D006657 2.7e-108 396.0 286 68.5
AT5G01010 Arabidopsis thaliana HOM05D005218 ORTHO05D006657 3.5e-108 395.6 283 68.6
BraA02t04669Z Brassica rapa HOM05D005218 ORTHO05D006657 3.5e-108 395.6 283 68.6
Haze_21230 Corylus avellana HOM05D005218 ORTHO05D006657 3.5e-108 395.6 303 66.0
FAN09G2324 Fragaria x ananassa HOM05D005218 ORTHO05D006657 3.5e-108 395.6 296 67.6
FAN02G3856 Fragaria x ananassa HOM05D005218 ORTHO05D006657 4.5e-108 395.2 296 67.6
FvH4_6g09090 Fragaria vesca HOM05D005218 ORTHO05D006657 2.2e-107 392.9 296 67.2
BraA03t09386Z Brassica rapa HOM05D005218 ORTHO05D006657 3.8e-107 392.1 284 67.6
FAN14G0475 Fragaria x ananassa HOM05D005218 ORTHO05D006657 5.0e-107 391.7 296 66.9
FAN05G1148 Fragaria x ananassa HOM05D005218 ORTHO05D006657 8.5e-107 391.0 316 64.6
Lsat_1_v5_gn_5_153501 Lactuca sativa HOM05D005218 ORTHO05D006657 8.5e-107 391.0 296 67.6
Psat2g191240 Pisum sativum HOM05D005218 ORTHO05D006657 1.1e-106 390.6 295 66.1
Actinidia20812 Actinidia chinensis HOM05D005218 ORTHO05D006657 1.9e-106 389.8 244 78.7
EL10Ac4g10395 Beta vulgaris HOM05D005218 ORTHO05D006657 2.5e-106 389.4 295 66.8
BcaC03g13099 Brassica carinata HOM05D005218 ORTHO05D006657 1.0e-104 384.0 283 67.8
BolC2t05996H Brassica oleracea HOM05D005218 ORTHO05D006657 1.0e-104 384.0 283 67.8
Carub.0024s0001 Capsella rubella HOM05D005218 ORTHO05D006657 1.0e-104 384.0 283 66.1
CDE06G0216 Ceratophyllum demersum HOM05D005218 ORTHO05D006657 4.0e-104 382.1 284 64.8
BcaB01g06261 Brassica carinata HOM05D005218 ORTHO05D006657 8.8e-104 380.9 283 66.8
Medtr8g005040 Medicago truncatula HOM05D005218 ORTHO05D006657 3.7e-102 375.6 295 65.1
PSO339G0748 Papaver somniferum HOM05D005218 ORTHO05D006657 1.6e-100 370.2 301 62.5
BolC3t12584H Brassica oleracea HOM05D005218 ORTHO05D006657 3.8e-99 365.5 285 64.2
Zm00001eb284640 Zea mays HOM05D005218 ORTHO05D006657 3.8e-99 365.5 298 61.1
Os05g0306000 Oryza sativa ssp. japonica HOM05D005218 ORTHO05D006657 1.9e-98 363.2 285 63.9
vmacro08964 Vaccinium macrocarpon HOM05D005218 ORTHO05D006657 1.2e-97 360.5 493 44.4
AUR62006464 Chenopodium quinoa HOM05D005218 ORTHO05D006657 2.0e-84 316.6 219 70.8
AagrBONN_evm.TU.Sc2ySwM_228.4747 Anthoceros agrestis HOM05D005218 ORTHO05D006657 4.3e-82 308.9 299 54.2
MBI03_g45858_MAGBIO Magnolia biondii HOM05D005218 ORTHO05D006657 1.8e-80 303.5 244 63.9
Sabra04G0159700 Salix brachista HOM05D005218 ORTHO05D006657 2.6e-79 299.7 227 66.5
SMO198G0089 Selaginella moellendorffii HOM05D005218 ORTHO05D006657 4.1e-77 292.4 296 51.0
Mapoly0045s0012 Marchantia polymorpha HOM05D005218 ORTHO05D006657 2.7e-76 289.7 289 50.2
Cpa.g.sc1919.1 Carica papaya HOM05D005218 ORTHO05D006657 2.3e-75 286.6 199 73.9
BcaB01g06128 Brassica carinata HOM05D005218 ORTHO05D006657 2.2e-70 270.0 204 65.2
CBR_g279 Chara braunii HOM05D005218 ORTHO05D006657 3.7e-70 269.2 283 51.6
CiPaw.09G224300 Carya illinoinensis HOM05D005218 ORTHO05D006657 7.1e-61 238.4 154 75.3
RcHm_v2.0_Chr4g0423451 Rosa chinensis HOM05D005218 ORTHO05D006657 1.4e-56 224.2 164 73.8
Actinidia32581 Actinidia chinensis HOM05D005218 ORTHO05D006657 2.4e-56 223.4 153 68.6
Pp3c6_1360 Physcomitrium patens HOM05D005218 ORTHO05D006657 2.4e-53 213.4 208 51.4
CDE07G0921 Ceratophyllum demersum HOM05D005218 ORTHO05D006657 1.0e-51 208.0 134 74.6
RcHm_v2.0_Chr2g0142661 Rosa chinensis HOM05D005218 ORTHO05D006657 3.0e-51 206.5 152 70.4
AUR62029820 Chenopodium quinoa HOM05D005218 ORTHO05D006657 6.6e-51 205.3 143 68.5
PRCOL_00004779 Prasinoderma coloniale HOM05D005218 ORTHO05D006657 1.8e-48 197.2 308 37.0
SEGI_33787 Sequoiadendron giganteum HOM05D005218 ORTHO05D006657 6.9e-48 195.3 152 64.5
CiPaw.09G224400 Carya illinoinensis HOM05D005218 ORTHO05D006657 1.2e-47 194.5 140 65.7
CDE07G0273 Ceratophyllum demersum HOM05D005218 ORTHO05D006657 9.9e-39 164.9 149 53.0
RcHm_v2.0_Chr3g0481991 Rosa chinensis HOM05D005218 ORTHO05D006657 1.3e-38 164.5 123 69.1
A07p02820 Brassica napus HOM05D005218 ORTHO05D006657 1.8e-35 154.1 200 45.0
BraA07t28080Z Brassica rapa HOM05D005218 ORTHO05D006657 8.7e-35 151.8 193 45.6
Cre02.g117950 Chlamydomonas reinhardtii HOM05D005218 ORTHO05D006657 1.9e-34 150.6 304 33.2
RcHm_v2.0_Chr3g0494831 Rosa chinensis HOM05D005218 ORTHO05D006657 1.3e-25 121.3 93 59.1
Sabra12G0043200 Salix brachista HOM05D005218 ORTHO05D006657 8.5e-22 108.6 146 44.5
CDE07G0892 Ceratophyllum demersum HOM05D005218 ORTHO05D006657 2.5e-18 97.1 98 53.1
Lsat_1_v5_gn_8_105921 Lactuca sativa HOM05D005218 ORTHO05D002018 4.3e-18 96.3 79 59.5
SEGI_25208 Sequoiadendron giganteum HOM05D005218 ORTHO05D006657 1.2e-12 78.2 85 38.8
Lsat_1_v5_gn_5_172481 Lactuca sativa HOM05D001702 ORTHO05D001791 2.3e-11 73.9 42 76.2
BcaB01g06129 Brassica carinata HOM05D005218 ORTHO05D006657 2.6e-10 70.5 54 63.0
MD00G1001200 Malus domestica HOM05D005218 ORTHO05D006657 5.9e-07 59.3 35 71.4
RcHm_v2.0_Chr2g0163341 Rosa chinensis HOM05D005218 ORTHO05D006657 7.7e-07 58.9 39 74.4


User provided reference genes

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