Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 2.6e-97 358.6 170 100.0
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 3.2e-79 298.5 164 83.5
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 3.2e-79 298.5 164 83.5
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 4.1e-74 281.6 163 82.2
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.3e-74 281.2 163 79.1
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 7.0e-74 280.8 164 78.7
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.0e-74 280.8 163 78.5
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 2.7e-73 278.9 164 78.7
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.5e-73 278.1 163 77.9
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 2.9e-72 275.4 163 77.3
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 1.1e-71 273.5 164 76.8
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.9e-71 272.7 164 77.4
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 1.9e-71 272.7 163 76.1
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 9.4e-71 270.4 163 75.5
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.2e-70 270.0 163 76.1
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 1.6e-70 269.6 163 74.8
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 1.6e-70 269.6 164 75.0
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 2.7e-70 268.9 163 76.7
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 4.7e-70 268.1 163 74.2
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.8e-69 266.2 163 76.1
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 4.0e-69 265.0 190 67.9
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 4.0e-69 265.0 166 75.3
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 4.0e-69 265.0 166 75.3
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.8e-69 264.2 163 74.2
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 6.8e-69 264.2 163 74.8
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 6.8e-69 264.2 163 74.8
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 8.8e-69 263.8 165 75.8
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 8.8e-69 263.8 165 73.9
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.6e-68 262.3 177 69.5
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 5.7e-68 261.2 164 73.8
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 7.5e-68 260.8 166 74.1
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 9.8e-68 260.4 163 75.5
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 1.3e-67 260.0 163 74.2
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 2.2e-67 259.2 167 73.7
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 2.8e-67 258.8 164 73.8
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 6.3e-67 257.7 164 73.8
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.1e-66 256.9 165 73.9
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 1.4e-66 256.5 167 73.1
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 1.8e-66 256.1 167 71.9
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 1.8e-66 256.1 167 70.7
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 3.1e-66 255.4 164 75.0
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 4.1e-66 255.0 167 73.1
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 5.4e-66 254.6 165 72.7
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 7.0e-66 254.2 163 75.5
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.2e-65 253.4 167 72.5
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 2.0e-65 252.7 167 72.5
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 2.7e-65 252.3 164 71.3
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 2.7e-65 252.3 164 73.2
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 3.5e-65 251.9 163 69.9
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 5.9e-65 251.1 161 72.7
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 1.7e-64 249.6 167 72.5
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 5.0e-64 248.1 161 72.0
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 5.0e-64 248.1 164 69.5
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 6.5e-64 247.7 154 74.7
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 6.5e-64 247.7 149 77.9
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 1.1e-63 246.9 161 71.4
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 1.5e-63 246.5 164 67.7
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.9e-63 246.1 161 70.8
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 1.9e-63 246.1 179 67.6
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 2.5e-63 245.7 164 68.9
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 3.2e-63 245.4 161 70.8
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.2e-63 245.4 151 74.8
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.2e-63 245.4 164 72.6
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.2e-63 245.4 164 72.6
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 3.2e-63 245.4 163 69.9
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 4.2e-63 245.0 163 66.3
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 5.5e-63 244.6 165 73.9
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 7.2e-63 244.2 163 69.3
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 9.5e-63 243.8 164 72.0
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 9.5e-63 243.8 164 72.0
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.6e-62 243.0 161 72.0
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.6e-62 243.0 161 70.2
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 4.7e-62 241.5 161 69.6
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.1e-62 241.1 148 76.4
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 8.0e-62 240.7 161 68.9
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 6.8e-61 237.7 163 65.0
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 2.0e-60 236.1 164 65.2
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 4.4e-60 235.0 163 65.6
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 4.4e-60 235.0 163 64.4
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 9.8e-60 233.8 164 67.7
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 1.3e-59 233.4 164 67.7
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 1.7e-59 233.0 167 68.3
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 1.4e-58 229.9 163 67.5
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 2.4e-58 229.2 166 63.3
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 2.4e-58 229.2 166 65.1
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 2.0e-57 226.1 147 68.0
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 7.7e-57 224.2 165 63.6
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 1.1e-55 220.3 164 65.2
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 2.5e-55 219.2 168 60.1
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 1.6e-54 216.5 182 59.3
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 1.6e-54 216.5 150 66.7
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 1.0e-53 213.8 143 69.2
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.0e-53 213.8 143 69.2
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 5.2e-53 211.5 143 69.2
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 1.2e-52 210.3 143 68.5
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 1.5e-52 209.9 149 65.1
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 4.4e-52 208.4 166 58.4
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 5.7e-52 208.0 145 73.1
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 6.4e-51 204.5 147 66.0
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.6e-48 194.5 120 76.7
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 8.3e-43 177.6 140 60.0
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 7.0e-42 174.5 165 52.7
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 3.2e-34 149.1 176 42.6
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 8.6e-32 141.0 163 42.9
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 7.1e-26 121.3 80 63.8
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 3.5e-25 119.0 183 36.6
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 4.6e-25 118.6 123 49.6
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.1e-24 115.2 64 84.4
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 3.6e-22 109.0 67 67.2
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.4e-21 107.1 64 76.6
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.4e-18 97.1 64 75.0
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 1.8e-13 80.1 44 72.7
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 4.0e-13 79.0 52 67.3
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 1.5e-12 77.0 43 72.1
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 9.9e-12 74.3 51 66.7
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 2.2e-11 73.2 53 66.0
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 2.2e-11 73.2 53 66.0
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 2.2e-11 73.2 53 66.0
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 8.4e-11 71.2 52 65.4
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 1.9e-07 60.1 131 32.1
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 5.6e-07 58.5 49 57.1
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 5.6e-07 58.5 49 57.1
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 5.6e-07 58.5 49 57.1
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 5.6e-07 58.5 49 57.1


User provided reference genes

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