Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 2.5e-68 261.9 127 100.0
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 4.9e-64 247.7 127 91.3
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 3.2e-63 245.0 127 90.6
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 7.1e-63 243.8 126 90.5
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 9.2e-63 243.4 127 89.0
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 9.2e-63 243.4 125 90.4
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 9.2e-63 243.4 127 90.6
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 2.1e-62 242.3 127 89.8
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.1e-62 242.3 127 89.8
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 2.1e-62 242.3 127 89.0
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 2.1e-62 242.3 127 90.6
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.1e-62 242.3 127 90.6
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 2.7e-62 241.9 125 90.4
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.7e-62 241.9 123 91.9
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 4.6e-62 241.1 127 89.0
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 4.6e-62 241.1 126 89.7
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 7.8e-62 240.4 126 90.5
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 1.0e-61 240.0 127 87.4
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.7e-61 239.2 127 88.2
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 1.7e-61 239.2 127 88.2
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 1.7e-61 239.2 127 87.4
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 2.3e-61 238.8 126 86.5
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 2.3e-61 238.8 127 88.2
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 3.0e-61 238.4 127 88.2
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 3.9e-61 238.0 127 86.6
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 3.9e-61 238.0 122 90.2
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 5.1e-61 237.7 125 89.6
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 5.1e-61 237.7 127 87.4
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 6.6e-61 237.3 127 87.4
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 8.6e-61 236.9 123 90.2
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 8.6e-61 236.9 123 90.2
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.1e-60 236.5 125 88.0
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.1e-60 236.5 127 88.2
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.5e-60 236.1 125 87.2
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 2.5e-60 235.3 127 86.6
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 2.5e-60 235.3 127 85.8
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 3.3e-60 235.0 127 85.8
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 4.3e-60 234.6 125 86.4
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 5.6e-60 234.2 125 86.4
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 5.6e-60 234.2 127 87.4
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 7.3e-60 233.8 127 86.6
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 7.3e-60 233.8 125 84.8
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 9.5e-60 233.4 127 86.6
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 9.5e-60 233.4 127 85.0
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 1.6e-59 232.6 125 84.0
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.6e-59 232.6 127 85.0
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 1.6e-59 232.6 125 84.0
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 2.1e-59 232.3 127 85.8
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.8e-59 231.9 125 84.8
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 3.6e-59 231.5 126 84.1
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 3.6e-59 231.5 127 85.0
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 4.7e-59 231.1 126 83.3
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 4.7e-59 231.1 126 84.1
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 6.2e-59 230.7 127 85.0
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 8.1e-59 230.3 125 86.4
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 8.1e-59 230.3 127 85.0
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 1.1e-58 229.9 125 84.0
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 1.1e-58 229.9 126 81.7
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 1.4e-58 229.6 123 87.0
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 1.4e-58 229.6 125 86.4
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 1.4e-58 229.6 127 85.8
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 1.8e-58 229.2 123 87.0
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 3.1e-58 228.4 127 83.5
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 3.1e-58 228.4 127 84.3
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.1e-58 228.4 127 84.3
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.1e-58 228.4 127 84.3
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.1e-58 228.4 127 84.3
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.1e-58 228.4 127 84.3
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 3.1e-58 228.4 126 81.7
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 3.1e-58 228.4 128 81.2
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 4.0e-58 228.0 126 83.3
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 5.2e-58 227.6 127 83.5
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 5.2e-58 227.6 123 83.7
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 6.8e-58 227.3 122 82.8
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 8.9e-58 226.9 121 84.3
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 1.2e-57 226.5 125 83.2
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 1.2e-57 226.5 125 83.2
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 1.2e-57 226.5 125 81.6
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.2e-57 226.5 123 83.7
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 1.5e-57 226.1 126 82.5
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 1.5e-57 226.1 126 82.5
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 1.5e-57 226.1 126 82.5
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 1.5e-57 226.1 127 80.3
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 1.5e-57 226.1 126 82.5
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.0e-57 225.7 121 83.5
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 2.6e-57 225.3 125 84.8
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 2.6e-57 225.3 126 83.3
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 3.4e-57 224.9 121 83.5
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 4.4e-57 224.6 121 83.5
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 4.4e-57 224.6 125 80.8
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 9.9e-57 223.4 115 89.6
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 1.3e-56 223.0 122 82.0
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 2.2e-56 222.2 121 81.0
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 2.2e-56 222.2 128 82.0
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.2e-56 222.2 126 80.2
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 2.2e-56 222.2 122 82.0
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 2.9e-56 221.9 126 78.6
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 2.9e-56 221.9 123 81.3
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 3.8e-56 221.5 123 82.9
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 3.8e-56 221.5 121 83.5
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 3.8e-56 221.5 121 83.5
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 6.4e-56 220.7 121 83.5
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 6.4e-56 220.7 127 80.3
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 8.4e-56 220.3 121 81.8
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 8.4e-56 220.3 126 81.0
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 1.1e-55 219.9 121 82.6
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 1.4e-55 219.5 121 82.6
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 1.9e-55 219.2 126 77.8
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 3.2e-55 218.4 128 80.5
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 3.2e-55 218.4 121 81.8
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 5.4e-55 217.6 121 81.8
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 7.1e-55 217.2 121 81.0
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 7.1e-55 217.2 121 82.6
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.6e-54 216.1 126 77.8
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 2.1e-54 215.7 125 78.4
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 2.1e-54 215.7 121 81.0
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 3.5e-54 214.9 115 83.5
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 6.0e-54 214.2 125 79.2
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 7.8e-54 213.8 121 81.8
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 1.0e-53 213.4 125 76.8
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.1e-52 209.9 125 78.4
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 5.6e-52 207.6 107 89.7
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 1.2e-51 206.5 107 88.8
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.2e-51 206.5 125 79.2
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 4.7e-51 204.5 110 86.4
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 6.2e-51 204.1 118 79.7
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 3.1e-50 201.8 112 82.1
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 4.0e-50 201.4 112 82.1
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 2.6e-49 198.7 115 80.9
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 5.8e-49 197.6 112 80.4
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 7.6e-49 197.2 126 74.6
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 4.9e-48 194.5 101 92.1
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 6.4e-48 194.1 103 85.4
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 4.2e-47 191.4 122 75.4
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 5.4e-47 191.0 111 80.2
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 1.6e-46 189.5 134 70.9
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 2.3e-45 185.7 102 91.2
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 6.6e-45 184.1 122 65.6
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 6.2e-43 177.6 98 81.6
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.1e-42 176.8 98 85.7
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.1e-42 176.8 98 80.6
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.4e-42 175.6 89 91.0
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 4.9e-40 167.9 127 60.6
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 6.4e-40 167.5 120 64.2
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 6.4e-40 167.5 102 77.5
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 4.2e-39 164.9 123 61.0
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 9.3e-39 163.7 88 83.0
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 2.1e-38 162.5 132 65.2
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 4.5e-33 144.8 127 56.7
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 9.9e-33 143.7 87 79.3
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 9.9e-33 143.7 120 55.0
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 2.3e-29 132.5 122 51.6
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.5e-28 129.8 114 58.8
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.4e-26 122.5 108 57.4
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 3.1e-26 122.1 57 91.2
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 7.1e-23 110.9 62 85.5
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 2.7e-22 109.0 74 59.5
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 3.0e-21 105.5 126 45.2
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 2.5e-20 102.4 97 49.5
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 7.4e-20 100.9 79 54.4
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.8e-16 88.6 47 87.2
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 4.3e-12 75.1 35 97.1
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.7e-08 63.2 32 81.2
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 5.0e-08 61.6 35 74.3
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 8.5e-08 60.8 33 75.8


User provided reference genes

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