Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 3.0e-127 458.8 275 100.0
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 6.6e-58 228.4 275 45.8
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 3.1e-55 219.5 275 45.1
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 1.9e-52 210.3 275 45.5
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 7.9e-51 204.9 278 43.2
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 5.6e-49 198.7 277 43.7
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 1.4e-44 184.1 277 40.4
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.4e-44 184.1 272 41.9
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 1.2e-43 181.0 281 42.3
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 1.2e-43 181.0 273 40.3
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 3.5e-43 179.5 276 39.5
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 6.0e-43 178.7 282 40.8
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 7.9e-43 178.3 297 39.4
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 6.7e-42 175.3 276 39.5
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 8.7e-42 174.9 273 40.7
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 4.3e-41 172.6 278 39.9
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 1.1e-36 157.9 276 36.2
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.9e-36 157.1 254 39.8
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 9.3e-36 154.8 276 37.0
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 7.4e-33 145.2 275 36.0
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 4.5e-30 136.0 279 36.6
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 2.9e-29 133.3 283 34.6
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 3.8e-29 132.9 286 33.2
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 5.0e-29 132.5 209 37.3
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 1.4e-28 131.0 281 34.5
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 5.5e-28 129.0 279 35.1
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 5.5e-28 129.0 281 33.8
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 7.2e-28 128.6 279 36.2
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 9.4e-28 128.3 281 34.2
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 9.4e-28 128.3 273 33.7
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 1.2e-27 127.9 279 35.1
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 1.2e-27 127.9 285 33.0
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 1.6e-27 127.5 281 34.2
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 3.6e-27 126.3 295 35.3
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 1.0e-26 124.8 281 35.2
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 8.8e-26 121.7 284 35.6
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 1.1e-25 121.3 286 36.0
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 1.5e-25 120.9 282 32.6
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 2.0e-25 120.6 295 31.9
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 2.5e-25 120.2 282 34.8
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 3.3e-25 119.8 277 33.2
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 7.4e-25 118.6 278 33.1
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 1.3e-24 117.9 277 34.3
Actinidia33026 Actinidia chinensis HOM05D007349 ORTHO05D009317 2.8e-24 116.7 156 47.4
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 4.8e-24 115.9 281 32.7
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 4.8e-24 115.9 165 42.4
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 1.8e-23 114.0 290 32.1
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 6.9e-23 112.1 331 29.3
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 9.1e-23 111.7 277 31.4
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 1.2e-22 111.3 282 30.1
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 1.5e-22 110.9 274 33.2
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 2.6e-22 110.2 278 30.9
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 3.4e-22 109.8 221 33.5
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 7.7e-22 108.6 284 33.1
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 1.3e-21 107.8 230 33.0
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 1.3e-21 107.8 275 29.8
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 2.2e-21 107.1 221 33.5
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 3.8e-21 106.3 275 31.6
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 5.0e-21 105.9 279 30.5
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 8.5e-21 105.1 279 30.8
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 8.5e-21 105.1 276 42.4
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 4.2e-20 102.8 223 32.3
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 1.6e-19 100.9 312 29.5
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 2.1e-19 100.5 209 30.1
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 4.7e-19 99.4 265 32.8
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 2.3e-18 97.1 125 43.2
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 3.9e-18 96.3 285 30.9
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 1.5e-17 94.4 276 29.0
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 2.0e-17 94.0 224 33.0
Peaxi162Scf00938g00313 Petunia axillaris HOM05D007349 ORTHO05D009317 4.4e-17 92.8 141 39.7
Sopen00g011340 Solanum pennellii HOM05D007349 ORTHO05D009317 7.4e-17 92.0 148 35.8
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 3.7e-16 89.7 316 28.2
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 6.3e-16 89.0 42 88.1
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 8.2e-16 88.6 311 29.6
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 8.2e-16 88.6 125 41.6
Dinv29577 Davidia involucrata HOM05D007349 ORTHO05D009317 1.8e-15 87.4 120 39.2
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 3.1e-15 86.7 139 40.3
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 4.5e-14 82.8 42 81.0
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 1.3e-13 81.3 41 82.9
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 1.1e-12 78.2 308 26.9
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 1.1e-12 78.2 310 28.4
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 1.9e-12 77.4 309 26.5
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 4.2e-12 76.3 310 28.1
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 4.2e-12 76.3 305 28.5
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 1.6e-11 74.3 311 26.7
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 3.6e-11 73.2 302 26.5
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 3.6e-11 73.2 304 28.6
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 6.1e-11 72.4 272 31.2
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 1.4e-10 71.2 280 31.1
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.4e-10 71.2 40 75.0
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 3.0e-10 70.1 312 26.3
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 3.0e-10 70.1 43 67.4
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 5.2e-10 69.3 302 26.2
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 7.5e-09 65.5 44 68.2
Sc13g0000070 Simmondsia chinensis HOM05D007349 ORTHO05D009317 1.8e-07 60.8 158 33.5
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 2.0e-06 57.4 245 25.7
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 5.9e-06 55.8 36 61.1


User provided reference genes

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