Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 5.2e-243 844.0 430 100.0
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 6.3e-164 581.3 356 83.1
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 3.8e-153 545.4 431 67.3
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 4.7e-151 538.5 429 66.4
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.1e-143 513.1 430 60.5
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 6.1e-143 511.5 430 61.4
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.5e-141 506.9 432 63.7
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 2.0e-141 506.5 430 63.0
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 3.4e-141 505.8 430 64.2
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 4.4e-141 505.4 430 61.4
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 7.3e-136 488.0 431 59.2
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 3.4e-133 479.2 431 58.2
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 5.8e-133 478.4 336 71.1
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 1.7e-132 476.9 428 60.3
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 2.9e-132 476.1 430 59.1
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 8.3e-132 474.6 386 63.0
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 3.2e-131 472.6 374 63.6
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.6e-130 470.3 432 57.6
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.9e-128 463.4 422 58.5
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.9e-128 463.4 434 57.6
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 2.5e-128 463.0 430 59.5
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 5.6e-128 461.8 431 56.8
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 7.3e-128 461.5 320 71.6
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 7.3e-128 461.5 421 58.4
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 1.6e-127 460.3 288 76.7
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 2.1e-127 459.9 431 57.8
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 3.6e-127 459.1 430 57.9
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 4.0e-126 455.7 430 57.2
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 4.0e-126 455.7 430 57.7
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 6.8e-126 454.9 422 57.3
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 6.8e-126 454.9 357 64.7
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 3.4e-125 452.6 342 66.1
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 4.4e-125 452.2 343 64.4
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 5.8e-125 451.8 323 67.5
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 5.8e-125 451.8 420 57.4
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 5.8e-125 451.8 430 57.2
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 6.4e-124 448.4 425 57.4
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 5.4e-123 445.3 327 67.3
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 9.2e-123 444.5 382 59.7
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 9.2e-123 444.5 331 67.4
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 2.7e-122 443.0 431 56.8
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 4.6e-122 442.2 286 75.2
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 6.0e-122 441.8 346 63.6
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 6.0e-122 441.8 433 56.4
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 6.0e-122 441.8 340 63.8
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 1.0e-121 441.0 430 55.8
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.3e-121 440.7 350 62.9
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 1.7e-121 440.3 380 60.0
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 3.0e-121 439.5 339 63.4
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 3.9e-121 439.1 320 68.4
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.9e-120 436.8 356 62.4
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 2.5e-120 436.4 327 67.3
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 3.3e-120 436.0 348 62.1
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 4.3e-120 435.6 435 55.4
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 4.3e-120 435.6 413 55.9
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 3.6e-119 432.6 320 68.8
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 3.6e-119 432.6 325 66.5
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 4.7e-119 432.2 431 55.5
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 6.2e-119 431.8 356 60.1
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 1.4e-118 430.6 424 54.7
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 2.4e-118 429.9 373 59.2
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 2.0e-117 426.8 320 66.2
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 2.6e-117 426.4 419 56.1
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 3.4e-117 426.0 301 69.8
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 2.2e-116 423.3 322 65.2
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 2.9e-116 422.9 431 56.1
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 8.4e-116 421.4 320 66.6
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 8.4e-116 421.4 374 59.1
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 1.1e-115 421.0 322 64.9
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 1.1e-115 421.0 452 52.4
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 1.4e-115 420.6 312 67.0
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 2.4e-115 419.9 322 63.7
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 2.1e-114 416.8 320 65.9
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 2.1e-114 416.8 374 57.8
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 2.7e-114 416.4 324 64.5
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 4.6e-114 415.6 314 67.8
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 6.0e-114 415.2 322 64.9
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 1.0e-113 414.5 423 53.0
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.1e-112 411.0 367 59.7
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 2.5e-112 409.8 242 79.8
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 4.3e-112 409.1 320 65.3
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 7.3e-112 408.3 320 65.3
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 7.3e-112 408.3 320 65.3
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 7.3e-112 408.3 320 65.3
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 3.6e-111 406.0 320 65.0
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 3.1e-110 402.9 320 64.7
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.7e-108 397.1 380 57.4
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.7e-105 387.1 323 58.5
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 2.0e-101 373.6 316 57.3
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 5.8e-101 372.1 218 79.4
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 2.2e-100 370.2 290 63.1
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 8.4e-100 368.2 342 54.4
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 1.0e-97 361.3 245 70.6
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 2.4e-94 350.1 357 54.3
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 5.0e-84 315.8 430 45.8
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 4.5e-69 266.2 320 47.5
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 3.8e-68 263.1 435 40.0
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 2.8e-63 246.9 149 75.8
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 5.0e-52 209.5 309 38.8
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 9.1e-46 188.7 293 37.2
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.3e-44 184.9 204 52.0
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 1.5e-43 181.4 124 72.6
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 1.5e-43 181.4 124 72.6
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 3.2e-43 180.3 329 35.9
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 2.7e-37 160.6 119 63.9
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 4.5e-37 159.8 136 57.4
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 8.6e-36 155.6 97 79.4
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 4.2e-35 153.3 270 35.6
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 1.0e-33 148.7 141 56.0
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 6.3e-31 139.4 158 48.1
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 6.8e-25 119.4 153 46.4
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 1.2e-24 118.6 246 31.7
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 1.1e-19 102.1 210 31.9
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 4.3e-11 73.6 92 47.8
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 4.3e-11 73.6 92 47.8
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 6.2e-10 69.7 228 28.5


User provided reference genes

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