Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026660.1 Olea europaea HOM05D005119 ORTHO05D006338 3.2e-122 441.8 233 100.0
CSS0022741 Camellia sinensis var. sinensis HOM05D005119 ORTHO05D006338 1.3e-110 403.3 226 92.9
SGA_v2.0_scaffold16G07568 Striga asiatica HOM05D005119 ORTHO05D006338 1.3e-110 403.3 233 90.6
Cc01_g07550 Coffea canephora HOM05D005119 ORTHO05D006338 7.0e-109 397.5 233 91.0
Atru.chr3.2860 Acer truncatum HOM05D005119 ORTHO05D006338 1.7e-107 392.9 227 90.3
Dinv05232 Davidia involucrata HOM05D005119 ORTHO05D006338 2.9e-107 392.1 226 91.2
MSTRG.12410 Avicennia marina HOM05D005119 ORTHO05D006338 3.8e-107 391.7 233 88.4
Dinv25746 Davidia involucrata HOM05D005119 ORTHO05D006338 3.8e-107 391.7 226 91.2
Eucgr.B03785 Eucalyptus grandis HOM05D005119 ORTHO05D006338 3.8e-107 391.7 222 88.7
unitig_27.g25021 Utricularia gibba HOM05D005119 ORTHO05D006338 3.8e-107 391.7 233 88.8
Actinidia07012 Actinidia chinensis HOM05D005119 ORTHO05D006338 5.0e-107 391.3 234 89.7
MSTRG.17662 Avicennia marina HOM05D005119 ORTHO05D006338 5.0e-107 391.3 233 88.8
Sopen11g029200 Solanum pennellii HOM05D005119 ORTHO05D006338 5.0e-107 391.3 233 89.7
PGSC0003DMG400018703 Solanum tuberosum HOM05D005119 ORTHO05D006338 5.0e-107 391.3 233 89.7
Migut.N02419 Erythranthe guttata HOM05D005119 ORTHO05D006338 6.6e-107 391.0 233 88.4
Lj2A941G6 Lonicera japonica HOM05D005119 ORTHO05D006338 8.6e-107 390.6 233 88.0
Peaxi162Scf00217g00811 Petunia axillaris HOM05D005119 ORTHO05D006338 8.6e-107 390.6 233 88.8
RcHm_v2.0_Chr5g0049761 Rosa chinensis HOM05D005119 ORTHO05D006338 8.6e-107 390.6 224 89.7
Thecc.09G337400 Theobroma cacao HOM05D005119 ORTHO05D006338 8.6e-107 390.6 227 90.7
Oeu022226.2 Olea europaea HOM05D005119 ORTHO05D006338 1.1e-106 390.2 306 72.5
Gohir.D08G008500 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.9e-106 389.4 227 90.7
Gorai.004G001700 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.9e-106 389.4 227 90.7
CAN.G864.4 Capsicum annuum HOM05D005119 ORTHO05D006338 2.5e-106 389.0 233 89.7
Nitab4.5_0010431g0020 Nicotiana tabacum HOM05D005119 ORTHO05D006338 2.5e-106 389.0 233 89.3
SalBow3G0587 Salvia bowleyana HOM05D005119 ORTHO05D006338 2.5e-106 389.0 233 88.4
Duzib170G0448 Durio zibethinus HOM05D005119 ORTHO05D006338 4.3e-106 388.3 227 89.9
Ca_06151_v3 Cicer arietinum L. HOM05D005119 ORTHO05D006338 7.3e-106 387.5 232 85.8
Rhsim13G0201000 Rhododendron simsii HOM05D005119 ORTHO05D006338 9.5e-106 387.1 228 89.0
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla HOM05D005119 ORTHO05D006338 1.2e-105 386.7 230 90.4
PGR102G2321 Punica granatum HOM05D005119 ORTHO05D006338 1.2e-105 386.7 225 88.9
FAN21G1454 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.6e-105 386.3 224 89.3
Prupe.6G153600 Prunus persica HOM05D005119 ORTHO05D006338 2.1e-105 386.0 227 88.1
FAN21G3401 Fragaria x ananassa HOM05D005119 ORTHO05D006338 2.8e-105 385.6 224 88.8
ECA240G4195 Erigeron canadensis HOM05D005119 ORTHO05D006338 3.6e-105 385.2 237 86.5
Potri.004G196600 Populus trichocarpa HOM05D005119 ORTHO05D006338 3.6e-105 385.2 227 87.7
Duzib168G2211 Durio zibethinus HOM05D005119 ORTHO05D006338 6.1e-105 384.4 227 89.4
Lalb_Chr17g0347491 Lupinus albus HOM05D005119 ORTHO05D006338 6.1e-105 384.4 227 86.8
Ciclev10016530m.g Citrus clementina HOM05D005119 ORTHO05D006338 1.0e-104 383.6 228 88.6
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.0e-104 383.6 225 87.6
GSVIVG01037452001 Vitis vinifera HOM05D005119 ORTHO05D006338 1.0e-104 383.6 227 86.3
vmacro04109 Vaccinium macrocarpon HOM05D005119 ORTHO05D006338 1.8e-104 382.9 231 87.9
HanXRQChr13g0420891 Helianthus annuus HOM05D005119 ORTHO05D006338 2.3e-104 382.5 229 87.8
Manes.04G053600 Manihot esculenta HOM05D005119 ORTHO05D006338 5.2e-104 381.3 227 88.1
Psat2g022840 Pisum sativum HOM05D005119 ORTHO05D006338 6.8e-104 380.9 230 85.2
QL01p020410 Quercus lobata HOM05D005119 ORTHO05D006338 6.8e-104 380.9 231 87.0
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea HOM05D005119 ORTHO05D006338 1.2e-103 380.2 227 85.9
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea HOM05D005119 ORTHO05D006338 1.2e-103 380.2 229 85.2
Aa31LG1G13700 Aethionema arabicum HOM05D005119 ORTHO05D006338 2.0e-103 379.4 227 86.8
Potri.009G158800 Populus trichocarpa HOM05D005119 ORTHO05D006338 2.6e-103 379.0 229 88.2
Medtr5g087720 Medicago truncatula HOM05D005119 ORTHO05D006338 3.4e-103 378.6 221 87.3
PGSC0003DMG400008707 Solanum tuberosum HOM05D005119 ORTHO05D006338 3.4e-103 378.6 233 87.6
TAR636G0794 Trochodendron aralioides HOM05D005119 ORTHO05D006338 3.4e-103 378.6 227 87.7
AT5G21070 Arabidopsis thaliana HOM05D005119 ORTHO05D006338 4.4e-103 378.3 227 86.3
CANSAT54G2327 Cannabis sativa HOM05D005119 ORTHO05D006338 5.7e-103 377.9 228 88.2
CARHR191800 Cardamine hirsuta HOM05D005119 ORTHO05D006338 5.7e-103 377.9 227 85.9
Sopen01g004620 Solanum pennellii HOM05D005119 ORTHO05D006338 5.7e-103 377.9 233 87.1
TWI79G0087 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 5.7e-103 377.9 227 87.2
BcaB08g36485 Brassica carinata HOM05D005119 ORTHO05D006338 7.5e-103 377.5 227 85.9
PSO339G0009 Papaver somniferum HOM05D005119 ORTHO05D006338 9.8e-103 377.1 224 86.6
Phvul.008G207500 Phaseolus vulgaris HOM05D005119 ORTHO05D006338 9.8e-103 377.1 222 85.6
VMungo0647G2262 Vigna mungo HOM05D005119 ORTHO05D006338 9.8e-103 377.1 222 85.1
Thhalv10014597m.g Eutrema salsugineum HOM05D005119 ORTHO05D006338 1.3e-102 376.7 227 85.5
Sp6g23450 Schrenkiella parvula HOM05D005119 ORTHO05D006338 1.3e-102 376.7 227 85.5
Gorai.009G105100 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.7e-102 376.3 227 88.1
TPR.G11644 Trifolium pratense HOM05D005119 ORTHO05D006338 1.7e-102 376.3 230 84.8
Carub.0006s1937 Capsella rubella HOM05D005119 ORTHO05D006338 2.2e-102 375.9 227 85.9
Gohir.D05G101000 Gossypium hirsutum HOM05D005119 ORTHO05D006338 2.9e-102 375.6 227 87.7
C09p55010 Brassica napus HOM05D005119 ORTHO05D006338 4.9e-102 374.8 227 85.5
AL6G32630 Arabidopsis lyrata HOM05D005119 ORTHO05D006338 6.4e-102 374.4 227 85.5
DCAR_002131 Daucus carota HOM05D005119 ORTHO05D006338 6.4e-102 374.4 227 88.1
Glyma.02G274200 Glycine max HOM05D005119 ORTHO05D006338 6.4e-102 374.4 225 85.8
MELO3C015629.2 Cucumis melo HOM05D005119 ORTHO05D006338 8.3e-102 374.0 227 84.6
BcaB05g22789 Brassica carinata HOM05D005119 ORTHO05D006338 1.4e-101 373.2 227 85.5
Gohir.A05G101200 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.4e-101 373.2 224 88.4
Manes.11G112200 Manihot esculenta HOM05D005119 ORTHO05D006338 1.4e-101 373.2 227 87.2
Glyma.14G041900 Glycine max HOM05D005119 ORTHO05D006338 1.8e-101 372.9 226 85.0
TWI75G0877 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 1.8e-101 372.9 229 86.0
THA.LOC104799587 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 2.4e-101 372.5 227 85.0
BolC9t58364H Brassica oleracea HOM05D005119 ORTHO05D006338 3.2e-101 372.1 227 85.0
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 3.2e-101 372.1 211 91.5
Lj6g0018237 Lotus japonicus HOM05D005119 ORTHO05D006338 3.2e-101 372.1 227 83.7
Nitab4.5_0001183g0030 Nicotiana tabacum HOM05D005119 ORTHO05D006338 3.2e-101 372.1 222 90.1
PSO384G4010 Papaver somniferum HOM05D005119 ORTHO05D006338 3.2e-101 372.1 224 85.7
BcaC03g13824 Brassica carinata HOM05D005119 ORTHO05D006338 4.1e-101 371.7 227 84.6
FAN25G0803 Fragaria x ananassa HOM05D005119 ORTHO05D006338 4.1e-101 371.7 254 78.3
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus HOM05D005119 ORTHO05D006338 5.4e-101 371.3 227 84.6
C02p10590 Brassica napus HOM05D005119 ORTHO05D006338 5.4e-101 371.3 227 84.6
BraA02t05611Z Brassica rapa HOM05D005119 ORTHO05D006338 5.4e-101 371.3 227 84.6
EL10Ac7g16218 Beta vulgaris HOM05D005119 ORTHO05D006338 7.0e-101 370.9 226 86.3
A10p19000 Brassica napus HOM05D005119 ORTHO05D006338 7.0e-101 370.9 227 84.6
BraA10t43978Z Brassica rapa HOM05D005119 ORTHO05D006338 7.0e-101 370.9 227 84.6
Sabra04G0133300 Salix brachista HOM05D005119 ORTHO05D006338 9.2e-101 370.5 227 84.1
BolC2t07092H Brassica oleracea HOM05D005119 ORTHO05D006338 1.2e-100 370.2 227 84.1
LjContig00564g0012096 Lotus japonicus HOM05D005119 ORTHO05D006338 2.0e-100 369.4 228 83.8
Sed0002058 Sechium edule HOM05D005119 ORTHO05D006338 2.0e-100 369.4 227 84.1
MD11G1180800 Malus domestica HOM05D005119 ORTHO05D006338 7.8e-100 367.5 228 85.1
THA.LOC104810964 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 7.8e-100 367.5 227 85.5
Aqoxy2G00066 Aquilegia oxysepala HOM05D005119 ORTHO05D006338 1.3e-99 366.7 226 85.4
MBI19_g28105_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 1.7e-99 366.3 224 84.4
ClCG03G014150 Citrullus lanatus HOM05D005119 ORTHO05D006338 3.9e-99 365.2 227 83.7
Hund18832 Selenicereus undatus HOM05D005119 ORTHO05D006338 3.9e-99 365.2 227 84.6
Sed0001894 Sechium edule HOM05D005119 ORTHO05D006338 5.0e-99 364.8 227 83.7
Lsat_1_v5_gn_3_116100 Lactuca sativa HOM05D005119 ORTHO05D006338 1.5e-98 363.2 210 91.0
MBI13_g02397_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 2.5e-98 362.5 227 83.7
CsaV3_1G042110 Cucumis sativus L. HOM05D005119 ORTHO05D006338 4.3e-98 361.7 227 82.8
Os01g0277700 Oryza sativa ssp. japonica HOM05D005119 ORTHO05D006338 4.3e-98 361.7 230 83.0
Sc21g0006500 Simmondsia chinensis HOM05D005119 ORTHO05D006338 4.3e-98 361.7 224 85.7
AUR62001614 Chenopodium quinoa HOM05D005119 ORTHO05D006338 1.6e-97 359.8 228 84.2
ATR0307G125 Amborella trichopoda HOM05D005119 ORTHO05D006338 5.2e-96 354.8 224 82.6
SEGI_02516 Sequoiadendron giganteum HOM05D005119 ORTHO05D006338 1.5e-95 353.2 215 84.7
Zm00001eb128960 Zea mays HOM05D005119 ORTHO05D006338 2.0e-95 352.8 222 82.9
HPP92_006662 Vanilla planifolia HOM05D005119 ORTHO05D006338 6.4e-94 347.8 227 80.2
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 4.7e-89 331.6 231 79.2
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 3.1e-88 328.9 189 91.0
Mapoly0024s0118 Marchantia polymorpha HOM05D005119 ORTHO05D006338 2.4e-85 319.3 215 77.2
SMO347G0469 Selaginella moellendorffii HOM05D005119 ORTHO05D006338 2.4e-85 319.3 208 78.8
CDE07G1923 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 3.2e-85 318.9 215 75.8
Solyc11g071510.3 Solanum lycopersicum HOM05D005119 ORTHO05D006338 7.3e-82 307.8 192 87.0
Lj2C929T5 Lonicera japonica HOM05D005119 ORTHO05D006338 1.5e-79 300.1 179 87.2
Pp3c19_11640 Physcomitrium patens HOM05D005119 ORTHO05D006338 3.2e-77 292.4 220 70.0
SGA_v2.0_scaffold79G25507 Striga asiatica HOM05D005119 ORTHO05D006338 7.1e-77 291.2 163 95.1
Haze_23668 Corylus avellana HOM05D005119 ORTHO05D006338 1.3e-75 287.0 194 81.4
Gohir.A08G000076 Gossypium hirsutum HOM05D005119 ORTHO05D006338 2.1e-73 279.6 155 95.5
CiPaw.14G091700 Carya illinoinensis HOM05D005119 ORTHO05D006338 8.1e-73 277.7 155 92.9
Nn7g37297 Nelumbo nucifera HOM05D005119 ORTHO05D006338 8.1e-73 277.7 179 82.1
FvH4_3g27140 Fragaria vesca HOM05D005119 ORTHO05D006338 8.9e-72 274.2 155 92.9
TAR369G0017 Trochodendron aralioides HOM05D005119 ORTHO05D006338 8.9e-72 274.2 155 91.6
DCAR_031602 Daucus carota HOM05D005119 ORTHO05D006338 3.8e-70 268.9 166 86.7
Cpa.g.sc103.65 Carica papaya HOM05D005119 ORTHO05D006338 1.1e-69 267.3 161 85.1
CDE08G0206 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 1.4e-69 266.9 181 78.5
AagrBONN_evm.TU.Sc2ySwM_228.3807 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-67 260.4 184 73.9
CDE04G1732 Ceratophyllum demersum HOM05D005119 ORTHO05D001779 3.0e-59 232.6 156 77.6
AUR62020163 Chenopodium quinoa HOM05D005119 ORTHO05D006338 1.9e-53 213.4 124 89.5
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 3.0e-51 206.1 162 71.6
Solyc01g009145.1 Solanum lycopersicum HOM05D005119 ORTHO05D006338 2.1e-44 183.3 103 94.2
Gorai.006G031100 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.7e-44 183.0 109 90.8
EL10Ac6g14714 Beta vulgaris HOM05D005119 ORTHO05D006338 5.3e-40 168.7 102 89.2
Gohir.D11G235450 Gossypium hirsutum HOM05D005119 ORTHO05D006338 8.7e-35 151.4 155 58.1
Gorai.004G093900 Gossypium raimondii HOM05D005119 ORTHO05D006338 4.3e-34 149.1 87 93.1
AagrBONN_evm.TU.Sc2ySwM_368.775 Anthoceros agrestis HOM05D005119 ORTHO05D006338 1.0e-27 127.9 77 80.5
PRCOL_00002764 Prasinoderma coloniale HOM05D005119 ORTHO05D006338 7.4e-26 121.7 206 39.3
Actinidia37188 Actinidia chinensis HOM05D005119 ORTHO05D006338 6.9e-24 115.2 64 89.1
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea HOM05D005119 ORTHO05D006338 3.4e-23 112.8 81 72.8
RcHm_v2.0_Chr5g0049771 Rosa chinensis HOM05D005119 ORTHO05D006338 2.5e-21 106.7 64 78.1
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 9.7e-18 94.7 66 75.8
SHI25369 Sapria himalayana HOM05D005119 ORTHO05D006338 7.7e-15 85.1 63 68.3
Dinv01011 Davidia involucrata HOM05D005119 ORTHO05D006338 3.0e-11 73.2 50 74.0


User provided reference genes

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