Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 2.7e-74 282.0 145 100.0
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 6.0e-58 227.6 145 81.4
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 6.6e-57 224.2 145 82.1
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 3.3e-56 221.9 145 80.0
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 4.3e-56 221.5 145 80.0
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 4.3e-56 221.5 145 79.3
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 1.2e-55 219.9 145 81.4
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 4.7e-55 218.0 145 78.6
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 4.7e-55 218.0 145 77.9
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 1.1e-54 216.9 145 77.2
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 1.1e-54 216.9 145 79.3
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 1.4e-54 216.5 145 75.9
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 1.8e-54 216.1 146 77.4
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 2.4e-54 215.7 144 78.5
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 4.0e-54 214.9 145 76.6
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 4.0e-54 214.9 145 77.9
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 1.2e-53 213.4 145 77.9
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 2.0e-53 212.6 145 77.9
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 2.0e-53 212.6 145 76.6
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 2.0e-53 212.6 145 77.9
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 3.4e-53 211.8 145 77.2
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 4.4e-53 211.5 145 75.9
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 7.6e-53 210.7 145 76.6
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 1.3e-52 209.9 146 78.8
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 2.2e-52 209.1 146 78.8
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 2.2e-52 209.1 150 74.7
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 3.8e-52 208.4 143 76.2
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 4.9e-52 208.0 145 75.9
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 4.9e-52 208.0 145 75.2
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 8.4e-52 207.2 145 75.2
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 1.1e-51 206.8 145 78.6
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 1.1e-51 206.8 145 75.2
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 1.9e-51 206.1 145 74.5
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 3.2e-51 205.3 145 75.2
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 3.2e-51 205.3 145 75.9
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 3.2e-51 205.3 146 78.1
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 3.2e-51 205.3 145 73.8
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 4.1e-51 204.9 148 73.0
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 4.1e-51 204.9 145 74.5
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 7.1e-51 204.1 146 74.7
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 7.1e-51 204.1 145 75.9
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 1.2e-50 203.4 145 74.5
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 1.2e-50 203.4 145 74.5
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 2.7e-50 202.2 145 74.5
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 2.7e-50 202.2 145 74.5
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 2.7e-50 202.2 145 78.6
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 3.5e-50 201.8 145 73.8
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 3.5e-50 201.8 145 73.1
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 4.6e-50 201.4 146 73.3
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 4.6e-50 201.4 146 75.3
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 6.0e-50 201.1 167 69.5
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 7.8e-50 200.7 145 73.1
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 1.0e-49 200.3 146 76.7
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 1.0e-49 200.3 147 72.1
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 1.3e-49 199.9 146 76.7
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 1.3e-49 199.9 145 77.2
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 1.7e-49 199.5 148 70.9
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 2.3e-49 199.1 146 76.0
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 5.1e-49 198.0 148 74.3
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 5.1e-49 198.0 148 74.3
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 5.1e-49 198.0 146 74.7
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 6.6e-49 197.6 156 70.5
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 6.6e-49 197.6 145 70.3
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 1.1e-48 196.8 132 78.8
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 1.1e-48 196.8 145 74.5
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 1.5e-48 196.4 149 73.8
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 1.5e-48 196.4 149 73.8
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 1.5e-48 196.4 149 73.8
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 1.5e-48 196.4 146 72.6
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 1.5e-48 196.4 146 74.0
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.9e-48 196.1 145 73.1
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 2.5e-48 195.7 146 75.3
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 3.3e-48 195.3 145 71.0
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 3.3e-48 195.3 146 74.0
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 4.3e-48 194.9 145 73.1
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 5.6e-48 194.5 145 71.7
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 5.6e-48 194.5 145 72.4
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 9.6e-48 193.7 133 75.9
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 9.6e-48 193.7 145 72.4
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.6e-47 193.0 143 72.0
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 1.6e-47 193.0 113 84.1
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 1.6e-47 193.0 146 69.9
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 2.1e-47 192.6 145 70.3
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 2.1e-47 192.6 145 69.7
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 2.8e-47 192.2 133 75.9
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 2.8e-47 192.2 145 69.7
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 3.6e-47 191.8 145 71.7
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 3.6e-47 191.8 145 71.7
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 3.6e-47 191.8 145 73.1
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 3.6e-47 191.8 141 73.8
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 6.2e-47 191.0 147 69.4
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 6.2e-47 191.0 148 73.0
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 8.1e-47 190.7 146 69.9
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 1.1e-46 190.3 145 72.4
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 1.1e-46 190.3 145 71.0
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 1.8e-46 189.5 147 70.1
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 4.0e-46 188.3 145 69.0
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 5.2e-46 188.0 170 62.9
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 6.9e-46 187.6 146 69.2
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 6.9e-46 187.6 116 81.0
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 9.0e-46 187.2 145 69.7
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 9.0e-46 187.2 146 69.2
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 9.0e-46 187.2 140 70.7
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 2.6e-45 185.7 134 73.1
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 3.4e-45 185.3 148 68.9
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 4.4e-45 184.9 145 68.3
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 5.8e-45 184.5 147 70.1
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 5.8e-45 184.5 221 53.4
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 5.8e-45 184.5 145 69.7
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 9.9e-45 183.7 147 69.4
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 9.9e-45 183.7 147 69.4
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 1.3e-44 183.3 145 66.9
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 1.7e-44 183.0 116 78.4
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 3.8e-44 181.8 147 68.7
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 1.4e-43 179.9 145 69.7
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 5.4e-43 177.9 146 66.4
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 1.2e-42 176.8 176 58.0
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 2.7e-42 175.6 144 66.7
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.7e-41 172.9 116 75.9
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 1.5e-40 169.9 118 72.9
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 9.6e-40 167.2 111 77.5
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 9.6e-40 167.2 144 63.9
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 1.6e-39 166.4 109 79.8
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 9.0e-38 160.6 206 49.5
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 1.2e-37 160.2 92 88.0
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 1.2e-37 160.2 88 89.8
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 2.6e-37 159.1 91 87.9
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 8.4e-36 154.1 110 72.7
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 3.2e-35 152.1 90 84.4
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 1.5e-32 143.3 99 75.8
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 1.8e-30 136.3 108 60.2
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 9.9e-29 130.6 112 61.6
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 1.9e-27 126.3 122 54.1
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 1.6e-23 113.2 147 51.7
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 8.2e-23 110.9 108 57.4
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 4.5e-21 105.1 60 90.0
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 1.4e-19 100.1 63 84.1
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 4.2e-19 98.6 86 54.7
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 8.7e-17 90.9 81 55.6
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 1.5e-16 90.1 89 57.3
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 1.0e-12 77.4 122 40.2
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 1.7e-12 76.6 145 37.9
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 6.5e-12 74.7 113 42.5
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 1.6e-10 70.1 60 63.3
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 1.6e-10 70.1 63 58.7
RcHm_v2.0_Chr2g0130991 Rosa chinensis HOM05D004802 ORTHO05D005591 1.4e-09 67.0 68 54.4
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 2.5e-08 62.8 48 66.7
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 1.3e-07 60.5 35 85.7
PRCOL_00002926 Prasinoderma coloniale HOM05D004802 ORTHO05D005591 6.3e-07 58.2 98 40.8
SHI01130 Sapria himalayana HOM05D004802 ORTHO05D005591 1.8e-06 56.6 58 58.6


User provided reference genes

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