Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023967.3 Olea europaea HOM05D005120 ORTHO05D006174 8.0e-121 437.2 233 100.0
Oeu042231.1 Olea europaea HOM05D005120 ORTHO05D006174 4.5e-39 165.6 105 88.6
Thecc.03G314000 Theobroma cacao HOM05D005120 ORTHO05D006174 8.2e-25 118.2 115 57.4
Solyc08g076290.3 Solanum lycopersicum HOM05D005120 ORTHO05D006174 1.8e-24 117.1 101 65.3
Sopen08g024900 Solanum pennellii HOM05D005120 ORTHO05D006174 1.8e-24 117.1 101 65.3
Duzib205G1724 Durio zibethinus HOM05D005120 ORTHO05D006174 2.4e-24 116.7 116 58.6
Migut.A00586 Erythranthe guttata HOM05D005120 ORTHO05D006174 5.3e-24 115.5 104 63.5
HanXRQChr02g0050021 Helianthus annuus HOM05D005120 ORTHO05D006174 6.9e-24 115.2 101 65.3
MSTRG.11896 Avicennia marina HOM05D005120 ORTHO05D006174 2.0e-23 113.6 114 57.9
Lj8A318T44 Lonicera japonica HOM05D005120 ORTHO05D006174 2.0e-23 113.6 114 57.9
SGA_v2.0_scaffold42G16013 Striga asiatica HOM05D005120 ORTHO05D006174 2.6e-23 113.2 101 61.4
Eucgr.E01259 Eucalyptus grandis HOM05D005120 ORTHO05D006174 4.5e-23 112.5 101 61.4
Cc08_g03980 Coffea canephora HOM05D005120 ORTHO05D006174 7.7e-23 111.7 98 63.3
PGR042G0860 Punica granatum HOM05D005120 ORTHO05D006174 1.0e-22 111.3 97 62.9
Nitab4.5_0000543g0120 Nicotiana tabacum HOM05D005120 ORTHO05D006174 2.2e-22 110.2 97 64.9
TWI60G0565 Tripterygium wilfordii HOM05D005120 ORTHO05D006174 2.2e-22 110.2 101 59.4
AUR62018612 Chenopodium quinoa HOM05D005120 ORTHO05D006174 2.9e-22 109.8 103 58.3
DCAR_004262 Daucus carota HOM05D005120 ORTHO05D006174 3.8e-22 109.4 101 60.4
Gorai.003G186700 Gossypium raimondii HOM05D005120 ORTHO05D006174 5.0e-22 109.0 115 53.9
QL12p000342 Quercus lobata HOM05D005120 ORTHO05D006174 5.0e-22 109.0 102 60.8
Cfa012552 Carpinus fangiana HOM05D005120 ORTHO05D006174 6.5e-22 108.6 103 59.2
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 6.5e-22 108.6 105 61.9
vmacro00236 Vaccinium macrocarpon HOM05D005120 ORTHO05D006174 8.5e-22 108.2 98 65.3
Cpa.g.sc757.1 Carica papaya HOM05D005120 ORTHO05D006174 1.1e-21 107.8 102 58.8
CiPaw.11G101100 Carya illinoinensis HOM05D005120 ORTHO05D006174 1.1e-21 107.8 116 56.0
Dinv06901 Davidia involucrata HOM05D005120 ORTHO05D006174 1.4e-21 107.5 116 56.0
Gohir.D03G177466 Gossypium hirsutum HOM05D005120 ORTHO05D006174 1.4e-21 107.5 115 53.0
Potri.003G099600 Populus trichocarpa HOM05D005120 ORTHO05D006174 1.4e-21 107.5 132 48.5
Atru.chr6.1567 Acer truncatum HOM05D005120 ORTHO05D006174 1.9e-21 107.1 101 60.4
COL.COLO4_16896 Corchorus olitorius HOM05D005120 ORTHO05D006174 1.9e-21 107.1 106 59.4
GSVIVG01029984001 Vitis vinifera HOM05D005120 ORTHO05D006174 1.9e-21 107.1 102 62.7
Gohir.A03G000018 Gossypium hirsutum HOM05D005120 ORTHO05D006174 2.5e-21 106.7 115 52.2
Glyma.16G095100 Glycine max HOM05D005120 ORTHO05D006174 3.2e-21 106.3 95 58.9
Lsat_1_v5_gn_6_17781 Lactuca sativa HOM05D005120 ORTHO05D006174 4.2e-21 105.9 101 60.4
Atru.chr6.1566 Acer truncatum HOM05D005120 ORTHO05D006174 5.5e-21 105.5 101 60.4
MELO3C026723.2 Cucumis melo HOM05D005120 ORTHO05D006174 5.5e-21 105.5 102 60.8
MD06G1023600 Malus domestica HOM05D005120 ORTHO05D006174 5.5e-21 105.5 124 50.8
Medtr8g070830 Medicago truncatula HOM05D005120 ORTHO05D006174 7.2e-21 105.1 96 60.4
arahy.Tifrunner.gnm1.ann1.PMQ83Q Arachis hypogaea HOM05D005120 ORTHO05D006174 9.4e-21 104.8 97 60.8
PGSC0003DMG402009291 Solanum tuberosum HOM05D005120 ORTHO05D006174 9.4e-21 104.8 86 68.6
arahy.Tifrunner.gnm1.ann1.H9FFKJ Arachis hypogaea HOM05D005120 ORTHO05D006174 1.6e-20 104.0 97 60.8
Actinidia27272 Actinidia chinensis HOM05D005120 ORTHO05D006174 2.1e-20 103.6 103 60.2
ECA233G2235 Erigeron canadensis HOM05D005120 ORTHO05D006174 2.7e-20 103.2 99 60.6
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 2.7e-20 103.2 102 58.8
ClCG07G002270 Citrullus lanatus HOM05D005120 ORTHO05D006174 3.6e-20 102.8 95 60.0
Lalb_Chr16g0391911 Lupinus albus HOM05D005120 ORTHO05D006174 3.6e-20 102.8 98 57.1
THA.LOC104798500 Tarenaya hassleriana HOM05D005120 ORTHO05D006174 3.6e-20 102.8 95 60.0
CsaV3_3G030430 Cucumis sativus L. HOM05D005120 ORTHO05D006174 4.7e-20 102.4 117 55.6
Haze_08107 Corylus avellana HOM05D005120 ORTHO05D006174 6.1e-20 102.1 110 56.4
Sed0007636 Sechium edule HOM05D005120 ORTHO05D006174 8.0e-20 101.7 151 45.0
BcaC05g27233 Brassica carinata HOM05D005120 ORTHO05D006174 1.0e-19 101.3 93 61.3
CARHR031430 Cardamine hirsuta HOM05D005120 ORTHO05D006174 1.0e-19 101.3 101 53.5
FAN04G0205 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.0e-19 101.3 101 57.4
BcaB03g13768 Brassica carinata HOM05D005120 ORTHO05D006174 1.4e-19 100.9 84 66.7
A09p34100 Brassica napus HOM05D005120 ORTHO05D006174 1.4e-19 100.9 93 61.3
BraA09t38958Z Brassica rapa HOM05D005120 ORTHO05D006174 1.4e-19 100.9 93 61.3
Lj4g0011317 Lotus japonicus HOM05D005120 ORTHO05D006174 1.4e-19 100.9 101 57.4
Sc07g0008440 Simmondsia chinensis HOM05D005120 ORTHO05D006174 1.4e-19 100.9 155 44.5
Aa31LG2G13920 Aethionema arabicum HOM05D005120 ORTHO05D006174 1.8e-19 100.5 117 50.4
BcaC05g27930 Brassica carinata HOM05D005120 ORTHO05D006174 1.8e-19 100.5 84 65.5
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 1.8e-19 100.5 84 65.5
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 1.8e-19 100.5 84 65.5
Thhalv10007389m.g Eutrema salsugineum HOM05D005120 ORTHO05D006174 1.8e-19 100.5 102 53.9
Prupe.5G024500 Prunus persica HOM05D005120 ORTHO05D006174 1.8e-19 100.5 150 44.7
SGA_v2.0_scaffold89G27426 Striga asiatica HOM05D005120 ORTHO05D006174 1.8e-19 100.5 100 56.0
RcHm_v2.0_Chr7g0212851 Rosa chinensis HOM05D005120 ORTHO05D006174 2.3e-19 100.1 101 58.4
EL10Ac5g11981 Beta vulgaris HOM05D005120 ORTHO05D006174 3.0e-19 99.8 103 56.3
BcaB07g32869 Brassica carinata HOM05D005120 ORTHO05D006174 3.0e-19 99.8 84 65.5
Manes.17G006500 Manihot esculenta HOM05D005120 ORTHO05D006174 3.0e-19 99.8 127 49.6
Rhsim11G0027600 Rhododendron simsii HOM05D005120 ORTHO05D006174 3.0e-19 99.8 102 60.8
C05p31470 Brassica napus HOM05D005120 ORTHO05D006174 3.9e-19 99.4 93 60.2
BolC5t31871H Brassica oleracea HOM05D005120 ORTHO05D006174 3.9e-19 99.4 93 60.2
AL1G46150 Arabidopsis lyrata HOM05D005120 ORTHO05D006174 5.2e-19 99.0 84 65.5
FAN08G2640 Fragaria x ananassa HOM05D005120 ORTHO05D006174 6.7e-19 98.6 101 57.4
TAR374G0846 Trochodendron aralioides HOM05D005120 ORTHO05D006174 6.7e-19 98.6 104 56.7
VMungo0251G1066 Vigna mungo HOM05D005120 ORTHO05D006174 6.7e-19 98.6 101 55.4
BraA05t21413Z Brassica rapa HOM05D005120 ORTHO05D006174 8.8e-19 98.2 84 65.5
Carub.0001s3040 Capsella rubella HOM05D005120 ORTHO05D006174 8.8e-19 98.2 108 54.6
MBI04_g36023_MAGBIO Magnolia biondii HOM05D005120 ORTHO05D006174 8.8e-19 98.2 100 58.0
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 1.1e-18 97.8 84 64.3
CANSAT21G0750 Cannabis sativa HOM05D005120 ORTHO05D006174 1.1e-18 97.8 97 57.7
Sp1g27750 Schrenkiella parvula HOM05D005120 ORTHO05D006174 1.1e-18 97.8 84 63.1
FAN18G1216 Fragaria x ananassa HOM05D005120 ORTHO05D006174 2.0e-18 97.1 101 56.4
CAN.G773.16 Capsicum annuum HOM05D005120 ORTHO05D006174 2.6e-18 96.7 73 71.2
unitig_747.g21935 Utricularia gibba HOM05D005120 ORTHO05D006174 2.6e-18 96.7 102 55.9
Aqoxy7G00879 Aquilegia oxysepala HOM05D005120 ORTHO05D006174 3.3e-18 96.3 107 56.1
FvH4_5g23540 Fragaria vesca HOM05D005120 ORTHO05D006174 4.4e-18 95.9 101 55.4
FAN18G2593 Fragaria x ananassa HOM05D005120 ORTHO05D006174 4.4e-18 95.9 101 55.4
PGR044G1750 Punica granatum HOM05D005120 ORTHO05D006174 4.4e-18 95.9 98 57.1
Atru.chr6.1569 Acer truncatum HOM05D005120 ORTHO05D006174 7.4e-18 95.1 101 54.5
CSS0018999 Camellia sinensis var. sinensis HOM05D005120 ORTHO05D006174 7.4e-18 95.1 70 74.3
Nitab4.5_0006395g0010 Nicotiana tabacum HOM05D005120 ORTHO05D006174 7.4e-18 95.1 111 52.3
Zm00001eb025160 Zea mays HOM05D005120 ORTHO05D006174 7.4e-18 95.1 94 56.4
Nn1g01918 Nelumbo nucifera HOM05D005120 ORTHO05D006174 9.7e-18 94.7 108 52.8
Aa31LG2G11060 Aethionema arabicum HOM05D005120 ORTHO05D006174 1.3e-17 94.4 104 51.0
AT1G32080 Arabidopsis thaliana HOM05D005120 ORTHO05D006174 1.3e-17 94.4 123 45.5
Nn3g19343 Nelumbo nucifera HOM05D005120 ORTHO05D006174 1.7e-17 94.0 73 65.8
Ciclev10003461m.g Citrus clementina HOM05D005120 ORTHO05D006174 2.2e-17 93.6 99 52.5
Ah.07g201110 Amaranthus hybridus HOM05D005120 ORTHO05D006174 2.8e-17 93.2 102 51.0
CDE06G0533 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 2.8e-17 93.2 96 54.2
Phvul.003G274000 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 2.8e-17 93.2 102 52.9
Psat4g111760 Pisum sativum HOM05D005120 ORTHO05D006174 2.8e-17 93.2 117 47.0
SalBow1G1967 Salvia bowleyana HOM05D005120 ORTHO05D006174 6.3e-17 92.0 105 54.3
Zm00001eb025140 Zea mays HOM05D005120 ORTHO05D006174 6.3e-17 92.0 97 54.6
Sed0003941 Sechium edule HOM05D005120 ORTHO05D006174 8.2e-17 91.7 94 56.4
Hund14388 Selenicereus undatus HOM05D005120 ORTHO05D006174 8.2e-17 91.7 105 54.3
Dinv29029 Davidia involucrata HOM05D005120 ORTHO05D006174 3.1e-16 89.7 85 58.8
Glyma.01G009900 Glycine max HOM05D005120 ORTHO05D006174 3.1e-16 89.7 105 49.5
Oeu057370.1 Olea europaea HOM05D051727 ORTHO05D289774 4.1e-16 89.4 129 47.3
Os01g0511600 Oryza sativa ssp. japonica HOM05D005120 ORTHO05D006174 2.0e-15 87.0 84 58.3
arahy.Tifrunner.gnm1.ann1.B01XES Arachis hypogaea HOM05D005120 ORTHO05D006174 4.5e-15 85.9 95 53.7
Peaxi162Scf00408g00023 Petunia axillaris HOM05D005120 ORTHO05D006174 5.9e-15 85.5 65 70.8
Glyma.09G211200 Glycine max HOM05D005120 ORTHO05D006174 2.2e-14 83.6 92 50.0
SEGI_28661 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 5.0e-14 82.4 108 50.0
PSO717G0011 Papaver somniferum HOM05D005120 ORTHO05D006174 6.5e-14 82.0 83 56.6
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 1.1e-13 81.3 58 69.0
Hund11160 Selenicereus undatus HOM05D005120 ORTHO05D006174 1.1e-13 81.3 112 48.2
Phvul.002G132800 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 1.5e-13 80.9 94 50.0
PSO675G2578 Papaver somniferum HOM05D005120 ORTHO05D006174 2.5e-13 80.1 107 49.5
ATR0829G037 Amborella trichopoda HOM05D005120 ORTHO05D006174 3.2e-13 79.7 103 47.6
AUR62007376 Chenopodium quinoa HOM05D005120 ORTHO05D006174 8.0e-12 75.1 57 64.9
Mapoly0008s0007 Marchantia polymorpha HOM05D005120 ORTHO05D006174 1.4e-11 74.3 111 34.2
Lalb_Chr16g0380871 Lupinus albus HOM05D005120 ORTHO05D006174 1.8e-11 73.9 69 53.6
SMO347G0341 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 1.8e-11 73.9 70 55.7
Pp3c1_16500 Physcomitrium patens HOM05D005120 ORTHO05D006174 6.7e-11 72.0 90 48.9
AagrBONN_evm.TU.Sc2ySwM_117.3701 Anthoceros agrestis HOM05D005120 ORTHO05D006174 3.3e-10 69.7 78 47.4
CBR_g23153 Chara braunii HOM05D005120 ORTHO05D006174 3.3e-10 69.7 76 51.3
FAN13G2921 Fragaria x ananassa HOM05D005120 ORTHO05D006174 8.2e-09 65.1 67 58.2
Oeu064013.1 Olea europaea HOM05D013212 ORTHO05D288098 5.3e-08 62.4 111 36.0
Oeu004270.1 Olea europaea HOM05D013212 ORTHO05D007954 2.0e-07 60.5 97 39.2
CARHR291910 Cardamine hirsuta HOM05D005120 ORTHO05D006174 3.5e-07 59.7 53 58.5
Oeu023832.1 Olea europaea HOM05D022335 ORTHO05D025952 7.7e-07 58.5 116 35.3
arahy.Tifrunner.gnm1.ann1.1W9K9Y Arachis hypogaea HOM05D005120 ORTHO05D006174 1.7e-06 57.4 106 34.9
arahy.Tifrunner.gnm1.ann1.5B6WJ4 Arachis hypogaea HOM05D005120 ORTHO05D006174 1.7e-06 57.4 106 34.9


User provided reference genes

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