Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023787.1 Olea europaea HOM05D006083 ORTHO05D007634 9.1e-196 686.8 365 100.0
Dinv31433 Davidia involucrata HOM05D006083 ORTHO05D007634 3.3e-44 183.3 352 41.8
CSS0008531 Camellia sinensis var. sinensis HOM05D006083 ORTHO05D007634 3.0e-42 176.8 352 40.1
Actinidia02966 Actinidia chinensis HOM05D006083 ORTHO05D007634 1.1e-36 158.3 310 38.4
Rhsim03G0132700 Rhododendron simsii HOM05D006083 ORTHO05D007634 4.7e-35 152.9 308 36.4
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 8.0e-35 152.1 345 35.7
vmacro07157 Vaccinium macrocarpon HOM05D006083 ORTHO05D007634 1.0e-29 135.2 364 33.2
Cc02_g08180 Coffea canephora HOM05D006083 ORTHO05D007634 1.6e-27 127.9 306 36.9
Lsat_1_v5_gn_9_65161 Lactuca sativa HOM05D006083 ORTHO05D007634 2.9e-24 117.1 244 38.5
DCAR_027665 Daucus carota HOM05D006083 ORTHO05D007634 1.4e-23 114.8 286 35.7
Cfa001507 Carpinus fangiana HOM05D006083 ORTHO05D007634 2.4e-23 114.0 359 33.1
CiPaw.01G284100 Carya illinoinensis HOM05D006083 ORTHO05D007634 3.5e-22 110.2 355 31.0
Haze_17036 Corylus avellana HOM05D006083 ORTHO05D007634 4.6e-22 109.8 360 32.5
QL08p059019 Quercus lobata HOM05D006083 ORTHO05D007634 6.0e-22 109.4 395 31.1
CAN.G786.23 Capsicum annuum HOM05D006083 ORTHO05D007634 8.6e-21 105.5 339 31.3
Sopen04g005570 Solanum pennellii HOM05D006083 ORTHO05D007634 8.6e-21 105.5 334 31.7
HanXRQChr09g0247731 Helianthus annuus HOM05D006083 ORTHO05D007634 1.9e-20 104.4 201 41.3
Solyc04g011380.4 Solanum lycopersicum HOM05D006083 ORTHO05D007634 3.3e-20 103.6 334 31.7
TAR623G0128 Trochodendron aralioides HOM05D006083 ORTHO05D007634 5.6e-20 102.8 391 29.7
Thecc.10G046700 Theobroma cacao HOM05D006083 ORTHO05D007634 3.6e-19 100.1 407 30.5
Manes.07G113300 Manihot esculenta HOM05D006083 ORTHO05D007634 6.2e-19 99.4 308 30.8
Potri.008G052500 Populus trichocarpa HOM05D006083 ORTHO05D007634 3.1e-18 97.1 367 29.4
GSVIVG01016589001 Vitis vinifera HOM05D006083 ORTHO05D007634 6.8e-18 95.9 372 31.2
COL.COLO4_14970 Corchorus olitorius HOM05D006083 ORTHO05D007634 2.0e-17 94.4 296 32.8
Ciclev10030497m.g Citrus clementina HOM05D006083 ORTHO05D007634 4.4e-17 93.2 370 30.5
Nitab4.5_0003969g0020 Nicotiana tabacum HOM05D006083 ORTHO05D007634 7.6e-17 92.4 330 31.5
Glyma.18G288300 Glycine max HOM05D006083 ORTHO05D007634 1.7e-16 91.3 321 32.1
Peaxi162Scf00060g00026 Petunia axillaris HOM05D006083 ORTHO05D007634 1.7e-16 91.3 328 30.2
Nitab4.5_0005525g0010 Nicotiana tabacum HOM05D006083 ORTHO05D007634 2.2e-16 90.9 330 30.9
Lj1g0008101 Lotus japonicus HOM05D006083 ORTHO05D007634 3.7e-16 90.1 290 31.0
TAR369G0795 Trochodendron aralioides HOM05D006083 ORTHO05D007634 8.4e-16 89.0 340 30.6
Sabra08G0037800 Salix brachista HOM05D006083 ORTHO05D007634 5.4e-15 86.3 368 29.6
Ca_07227_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 7.1e-15 85.9 231 33.8
RcHm_v2.0_Chr1g0366201 Rosa chinensis HOM05D006083 ORTHO05D007634 2.1e-14 84.3 345 27.5
arahy.Tifrunner.gnm1.ann1.ES2X5Y Arachis hypogaea HOM05D006083 ORTHO05D007634 6.0e-14 82.8 238 31.9
arahy.Tifrunner.gnm1.ann1.V7LDKI Arachis hypogaea HOM05D006083 ORTHO05D007634 6.0e-14 82.8 238 31.9
Gohir.A05G349900 Gossypium hirsutum HOM05D006083 ORTHO05D007634 1.0e-13 82.0 271 34.3
TWI15G0674 Tripterygium wilfordii HOM05D006083 ORTHO05D007634 1.3e-13 81.6 335 30.7
VMungo1383G1537 Vigna mungo HOM05D006083 ORTHO05D007634 3.9e-13 80.1 338 32.2
Gorai.012G069900 Gossypium raimondii HOM05D006083 ORTHO05D007634 1.5e-12 78.2 381 30.4
Lalb_Chr10g0091761 Lupinus albus HOM05D006083 ORTHO05D007634 1.5e-12 78.2 290 31.4
Psat3g185080 Pisum sativum HOM05D006083 ORTHO05D007634 1.9e-12 77.8 363 29.2
Prupe.2G231200 Prunus persica HOM05D006083 ORTHO05D007634 2.5e-12 77.4 338 26.9
Aqoxy4G02985 Aquilegia oxysepala HOM05D006083 ORTHO05D007634 3.3e-12 77.0 248 31.0
CANSAT56G1432 Cannabis sativa HOM05D006083 ORTHO05D007634 4.3e-12 76.6 277 30.7
Gohir.D04G062600 Gossypium hirsutum HOM05D006083 ORTHO05D007634 4.3e-12 76.6 381 30.2
Nn2g12936 Nelumbo nucifera HOM05D006083 ORTHO05D007634 2.1e-11 74.3 356 28.4
MELO3C025449.2 Cucumis melo HOM05D006083 ORTHO05D007634 2.8e-11 73.9 208 35.6
FAN03G2083 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.8e-11 73.9 296 29.1
FAN06G5109 Fragaria x ananassa HOM05D006083 ORTHO05D007634 6.2e-11 72.8 333 28.2
FAN10G0925 Fragaria x ananassa HOM05D006083 ORTHO05D007634 8.1e-11 72.4 296 29.1
Eucgr.G02918 Eucalyptus grandis HOM05D006083 ORTHO05D007634 1.1e-10 72.0 318 28.3
FAN01G1089 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.1e-10 72.0 296 28.7
FAN06G0387 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.4e-10 70.9 333 27.9
Phvul.008G013666 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 4.0e-10 70.1 321 31.8
TPR.G40211 Trifolium pratense HOM05D006083 ORTHO05D007634 4.0e-10 70.1 298 29.2
Potri.010G208200 Populus trichocarpa HOM05D006083 ORTHO05D007634 8.9e-10 68.9 360 26.1
MD07G1193600 Malus domestica HOM05D006083 ORTHO05D007634 2.0e-09 67.8 390 26.2
Sc06g0002670 Simmondsia chinensis HOM05D006083 ORTHO05D007634 4.4e-09 66.6 280 31.1
FvH4_7g21930 Fragaria vesca HOM05D006083 ORTHO05D007634 1.7e-08 64.7 296 27.7
ClCG09G020050 Citrullus lanatus HOM05D006083 ORTHO05D007634 2.9e-08 63.9 206 33.0
Hund12547 Selenicereus undatus HOM05D006083 ORTHO05D007634 3.8e-08 63.5 235 29.8
Lalb_Chr04g0257831 Lupinus albus HOM05D006083 ORTHO05D007634 6.4e-08 62.8 328 27.4
CsaV3_5G026410 Cucumis sativus L. HOM05D006083 ORTHO05D007634 1.1e-07 62.0 208 32.7
PSO339G3664 Papaver somniferum HOM05D006083 ORTHO05D007634 2.4e-07 60.8 296 27.7
Hund24433 Selenicereus undatus HOM05D006083 ORTHO05D007634 3.2e-07 60.5 235 29.8
PSO384G3245 Papaver somniferum HOM05D006083 ORTHO05D007634 7.1e-07 59.3 245 29.8
AUR62040954 Chenopodium quinoa HOM05D006083 ORTHO05D007634 1.2e-06 58.5 344 27.3
Atru.chr12.505 Acer truncatum HOM05D006083 ORTHO05D007634 6.0e-06 56.2 125 32.8
THA.LOC104810174 Tarenaya hassleriana HOM05D006083 ORTHO05D007634 7.8e-06 55.8 259 30.1


User provided reference genes

Program Settings