Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023421.1 Olea europaea HOM05D005826 ORTHO05D004357 1.0e-21 105.9 58 100.0
Rhsim11G0104700 Rhododendron simsii HOM05D005826 ORTHO05D004357 1.9e-15 85.1 54 81.5
Actinidia17738 Actinidia chinensis HOM05D005826 ORTHO05D004357 2.5e-15 84.7 55 80.0
Rhsim11G0105000 Rhododendron simsii HOM05D005826 ORTHO05D004357 7.3e-15 83.2 55 80.0
Migut.O00760 Erythranthe guttata HOM05D005826 ORTHO05D004357 2.8e-14 81.3 57 77.2
CSS0017545 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 3.6e-14 80.9 53 81.1
CSS0045001 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 3.6e-14 80.9 53 81.1
Cpa.g.sc48.51 Carica papaya HOM05D005826 ORTHO05D004357 6.2e-14 80.1 59 76.3
PGR083G1613 Punica granatum HOM05D005826 ORTHO05D004357 6.2e-14 80.1 56 71.4
Migut.N00974 Erythranthe guttata HOM05D005826 ORTHO05D004357 1.1e-13 79.3 57 73.7
Sc09g0002410 Simmondsia chinensis HOM05D005826 ORTHO05D004357 6.8e-13 76.6 52 75.0
COL.COLO4_05485 Corchorus olitorius HOM05D005826 ORTHO05D004357 8.9e-13 76.3 48 81.2
FvH4_6g08510 Fragaria vesca HOM05D005826 ORTHO05D004357 8.9e-13 76.3 56 76.8
FAN02G3127 Fragaria x ananassa HOM05D005826 ORTHO05D004357 8.9e-13 76.3 56 76.8
FAN05G0435 Fragaria x ananassa HOM05D005826 ORTHO05D004357 8.9e-13 76.3 56 76.8
FAN09G2233 Fragaria x ananassa HOM05D005826 ORTHO05D004357 8.9e-13 76.3 56 76.8
FAN14G1262 Fragaria x ananassa HOM05D005826 ORTHO05D004357 8.9e-13 76.3 56 76.8
Manes.09G181300 Manihot esculenta HOM05D005826 ORTHO05D004357 8.9e-13 76.3 52 78.8
RcHm_v2.0_Chr3g0458551 Rosa chinensis HOM05D005826 ORTHO05D004357 8.9e-13 76.3 56 76.8
Thecc.05G329600 Theobroma cacao HOM05D005826 ORTHO05D004357 1.2e-12 75.9 52 75.0
Manes.08G107500 Manihot esculenta HOM05D005826 ORTHO05D004357 1.5e-12 75.5 52 76.9
Cc02_g35870 Coffea canephora HOM05D005826 ORTHO05D004357 2.0e-12 75.1 55 74.5
Ciclev10012662m.g Citrus clementina HOM05D005826 ORTHO05D004357 2.6e-12 74.7 57 66.7
Prupe.6G304400 Prunus persica HOM05D005826 ORTHO05D004357 2.6e-12 74.7 52 76.9
GSVIVG01031331001 Vitis vinifera HOM05D005826 ORTHO05D004357 2.6e-12 74.7 53 75.5
Cfa006771 Carpinus fangiana HOM05D005826 ORTHO05D004357 4.4e-12 73.9 57 70.2
Hma1.2p1_0052F.1_g030400 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 5.8e-12 73.6 54 74.1
MSTRG.27910 Avicennia marina HOM05D005826 ORTHO05D004357 7.5e-12 73.2 55 69.1
ECA240G4745 Erigeron canadensis HOM05D005826 ORTHO05D004357 7.5e-12 73.2 53 71.7
Eucgr.B01823 Eucalyptus grandis HOM05D005826 ORTHO05D004357 7.5e-12 73.2 58 72.4
MD12G1199800 Malus domestica HOM05D005826 ORTHO05D004357 7.5e-12 73.2 55 74.5
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 9.8e-12 72.8 56 75.0
Hund21832 Selenicereus undatus HOM05D005826 ORTHO05D004357 1.7e-11 72.0 52 73.1
Atru.chr12.1539 Acer truncatum HOM05D005826 ORTHO05D004357 2.2e-11 71.6 57 71.9
CANSAT54G1651 Cannabis sativa HOM05D005826 ORTHO05D004357 2.2e-11 71.6 52 69.2
Dinv30950 Davidia involucrata HOM05D005826 ORTHO05D004357 2.2e-11 71.6 52 71.2
CiPaw.07G036400 Carya illinoinensis HOM05D005826 ORTHO05D004357 2.9e-11 71.2 57 66.7
SGA_v2.0_scaffold22G09707 Striga asiatica HOM05D005826 ORTHO05D004357 2.9e-11 71.2 57 66.7
Lsat_1_v5_gn_7_64900 Lactuca sativa HOM05D005826 ORTHO05D004357 3.7e-11 70.9 51 72.5
Sed0027683 Sechium edule HOM05D005826 ORTHO05D004357 3.7e-11 70.9 54 72.2
CsaV3_1G038040 Cucumis sativus L. HOM05D005826 ORTHO05D004357 4.9e-11 70.5 54 74.1
Potri.013G002100 Populus trichocarpa HOM05D005826 ORTHO05D004357 8.3e-11 69.7 52 71.2
Nn4g25335 Nelumbo nucifera HOM05D005826 ORTHO05D004357 1.1e-10 69.3 57 68.4
Peaxi162Scf00194g00018 Petunia axillaris HOM05D005826 ORTHO05D004357 1.1e-10 69.3 59 66.1
QL03p011008 Quercus lobata HOM05D005826 ORTHO05D004357 1.1e-10 69.3 58 65.5
Potri.005G002700 Populus trichocarpa HOM05D005826 ORTHO05D004357 1.9e-10 68.6 52 69.2
CAN.G1248.16 Capsicum annuum HOM05D005826 ORTHO05D004357 2.4e-10 68.2 55 69.1
Dinv24515 Davidia involucrata HOM05D005826 ORTHO05D004357 2.4e-10 68.2 56 69.6
Nitab4.5_0002516g0020 Nicotiana tabacum HOM05D005826 ORTHO05D004357 3.2e-10 67.8 59 66.1
AL6G38590 Arabidopsis lyrata HOM05D005826 ORTHO05D004357 4.1e-10 67.4 62 66.1
AUR62000478 Chenopodium quinoa HOM05D005826 ORTHO05D004357 4.1e-10 67.4 52 69.2
Solyc01g101250.3 Solanum lycopersicum HOM05D005826 ORTHO05D004357 7.1e-10 66.6 59 64.4
Sopen01g044700 Solanum pennellii HOM05D005826 ORTHO05D004357 7.1e-10 66.6 59 64.4
PGSC0003DMG400018243 Solanum tuberosum HOM05D005826 ORTHO05D004357 7.1e-10 66.6 59 64.4
EL10Ac4g09561 Beta vulgaris HOM05D005826 ORTHO05D004357 1.2e-09 65.9 54 63.0
Hund07271 Selenicereus undatus HOM05D005826 ORTHO05D004357 1.2e-09 65.9 46 76.1
THA.LOC104821749 Tarenaya hassleriana HOM05D005826 ORTHO05D004357 1.6e-09 65.5 54 66.7
AUR62006820 Chenopodium quinoa HOM05D005826 ORTHO05D004357 2.1e-09 65.1 55 63.6
TWI12G0016 Tripterygium wilfordii HOM05D005826 ORTHO05D004357 2.1e-09 65.1 54 66.7
Sabra05G0000100 Salix brachista HOM05D005826 ORTHO05D004357 2.7e-09 64.7 55 65.5
Sabra05G0014200 Salix brachista HOM05D005826 ORTHO05D004357 2.7e-09 64.7 55 65.5
TPR.G1630 Trifolium pratense HOM05D005826 ORTHO05D004357 2.7e-09 64.7 55 65.5
Lalb_Chr18g0046231 Lupinus albus HOM05D005826 ORTHO05D004357 7.8e-09 63.2 58 60.3
vmacro01667 Vaccinium macrocarpon HOM05D005826 ORTHO05D004357 7.8e-09 63.2 85 49.4
AT5G26610 Arabidopsis thaliana HOM05D005826 ORTHO05D004357 1.0e-08 62.8 62 62.9
Nn3g21953 Nelumbo nucifera HOM05D005826 ORTHO05D004357 1.0e-08 62.8 57 63.2
Psat3g015120 Pisum sativum HOM05D005826 ORTHO05D004357 1.0e-08 62.8 58 60.3
PSO210G7107 Papaver somniferum HOM05D005826 ORTHO05D004357 1.3e-08 62.4 52 69.2
Sp2g21260 Schrenkiella parvula HOM05D005826 ORTHO05D004357 1.3e-08 62.4 62 62.9
Gohir.D13G184300 Gossypium hirsutum HOM05D005826 ORTHO05D004357 1.7e-08 62.0 45 71.1
Gorai.013G210000 Gossypium raimondii HOM05D005826 ORTHO05D004357 1.7e-08 62.0 45 71.1
PSO761G0619 Papaver somniferum HOM05D005826 ORTHO05D004357 1.7e-08 62.0 52 69.2
BcaB04g19716 Brassica carinata HOM05D005826 ORTHO05D004357 2.3e-08 61.6 59 62.7
Carub.0006s2438 Capsella rubella HOM05D005826 ORTHO05D004357 2.3e-08 61.6 62 61.3
BcaC04g23633 Brassica carinata HOM05D005826 ORTHO05D004357 3.0e-08 61.2 59 62.7
A09p05710 Brassica napus HOM05D005826 ORTHO05D004357 3.0e-08 61.2 59 62.7
C09p06300 Brassica napus HOM05D005826 ORTHO05D004357 3.0e-08 61.2 59 62.7
BolC9t53550H Brassica oleracea HOM05D005826 ORTHO05D004357 3.0e-08 61.2 59 62.7
BraA09t36211Z Brassica rapa HOM05D005826 ORTHO05D004357 3.0e-08 61.2 59 62.7
Thhalv10004695m.g Eutrema salsugineum HOM05D005826 ORTHO05D004357 3.0e-08 61.2 49 71.4
Ca_09273_v3 Cicer arietinum L. HOM05D005826 ORTHO05D004357 5.1e-08 60.5 58 56.9
Ah.06g190730 Amaranthus hybridus HOM05D005826 ORTHO05D004357 6.6e-08 60.1 58 60.3
HanXRQChr09g0247941 Helianthus annuus HOM05D005826 ORTHO05D004357 6.6e-08 60.1 53 64.2
TAR636G1621 Trochodendron aralioides HOM05D005826 ORTHO05D004357 6.6e-08 60.1 57 63.2
SEGI_10560 Sequoiadendron giganteum HOM05D005826 ORTHO05D004357 8.6e-08 59.7 54 64.8
arahy.Tifrunner.gnm1.ann1.CWLZ7L Arachis hypogaea HOM05D005826 ORTHO05D004357 2.5e-07 58.2 54 59.3
MBI18_g10370_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 4.3e-07 57.4 54 64.8
Phvul.001G222000 Phaseolus vulgaris HOM05D005826 ORTHO05D004357 4.3e-07 57.4 52 59.6
Lj1g0011738 Lotus japonicus HOM05D005826 ORTHO05D004357 5.6e-07 57.0 57 56.1
Medtr7g111520 Medicago truncatula HOM05D005826 ORTHO05D004357 5.6e-07 57.0 52 61.5
Glyma.19G225400 Glycine max HOM05D005826 ORTHO05D004357 7.3e-07 56.6 62 51.6
arahy.Tifrunner.gnm1.ann1.TKMT5T Arachis hypogaea HOM05D005826 ORTHO05D004357 9.5e-07 56.2 52 59.6
Glyma.03G228100 Glycine max HOM05D005826 ORTHO05D004357 1.2e-06 55.8 62 48.4
ATR0796G273 Amborella trichopoda HOM05D005826 ORTHO05D004357 2.8e-06 54.7 53 60.4
Aqoxy2G02470 Aquilegia oxysepala HOM05D005826 ORTHO05D004357 2.8e-06 54.7 54 64.8
VMungo1383G1915 Vigna mungo HOM05D005826 ORTHO05D004357 2.8e-06 54.7 58 51.7
Pp3c20_6860 Physcomitrium patens HOM05D005826 ORTHO05D004357 8.1e-06 53.1 56 60.7
Zm00001eb089260 Zea mays HOM05D005826 ORTHO05D004357 8.1e-06 53.1 56 57.1


User provided reference genes

Program Settings