Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023198.1 Olea europaea HOM05D004344 ORTHO05D006026 1.7e-305 1052.0 563 100.0
Oeu020531.3 Olea europaea HOM05D004344 ORTHO05D006026 1.4e-224 783.1 565 78.4
MSTRG.23740 Avicennia marina HOM05D004344 ORTHO05D006026 6.3e-172 608.2 581 64.0
SGA_v2.0_scaffold15G07321 Striga asiatica HOM05D004344 ORTHO05D006026 1.3e-153 547.4 576 59.2
SGA_v2.0_scaffold46G17397 Striga asiatica HOM05D004344 ORTHO05D006026 1.6e-151 540.4 574 58.5
Cc07_g06110 Coffea canephora HOM05D004344 ORTHO05D006026 8.6e-145 518.1 573 55.0
unitig_899.g14946 Utricularia gibba HOM05D004344 ORTHO05D006026 4.3e-144 515.8 584 53.4
Migut.H00422 Erythranthe guttata HOM05D004344 ORTHO05D006026 1.2e-141 507.7 572 53.7
CSS0049451 Camellia sinensis var. sinensis HOM05D004344 ORTHO05D006026 1.3e-140 504.2 564 54.3
Nitab4.5_0002029g0030 Nicotiana tabacum HOM05D004344 ORTHO05D006026 4.1e-139 499.2 569 52.4
Hma1.2p1_0017F.1_g011490 Hydrangea macrophylla HOM05D004344 ORTHO05D006026 1.4e-134 484.2 573 52.7
Nitab4.5_0003519g0040 Nicotiana tabacum HOM05D004344 ORTHO05D006026 5.2e-134 482.3 569 50.8
vmacro05947 Vaccinium macrocarpon HOM05D004344 ORTHO05D006026 1.5e-133 480.7 566 52.5
GSVIVG01022113001 Vitis vinifera HOM05D004344 ORTHO05D006026 1.7e-129 467.2 569 51.7
Lj7C70T9 Lonicera japonica HOM05D004344 ORTHO05D006026 2.3e-129 466.8 565 50.8
TAR376G0722 Trochodendron aralioides HOM05D004344 ORTHO05D006026 3.0e-129 466.5 574 51.4
Peaxi162Scf00450g00127 Petunia axillaris HOM05D004344 ORTHO05D006026 3.9e-129 466.1 570 51.1
DCAR_025744 Daucus carota HOM05D004344 ORTHO05D006026 3.3e-128 463.0 573 51.7
Solyc02g093300.3 Solanum lycopersicum HOM05D004344 ORTHO05D006026 4.3e-128 462.6 592 49.7
Dinv26836 Davidia involucrata HOM05D004344 ORTHO05D006026 7.3e-128 461.8 520 55.4
Sopen02g037860 Solanum pennellii HOM05D004344 ORTHO05D006026 9.6e-128 461.5 582 49.8
Prupe.7G131600 Prunus persica HOM05D004344 ORTHO05D006026 1.6e-127 460.7 565 51.3
QL06p040994 Quercus lobata HOM05D004344 ORTHO05D006026 3.8e-124 449.5 583 49.2
Rhsim10G0115900 Rhododendron simsii HOM05D004344 ORTHO05D006026 4.9e-124 449.1 577 48.9
MELO3C020860.2 Cucumis melo HOM05D004344 ORTHO05D006026 6.4e-124 448.7 573 48.5
TWI09G1157 Tripterygium wilfordii HOM05D004344 ORTHO05D006026 2.4e-123 446.8 574 49.3
CsaV3_2G016500 Cucumis sativus L. HOM05D004344 ORTHO05D006026 3.2e-123 446.4 572 47.7
FvH4_1g22730 Fragaria vesca HOM05D004344 ORTHO05D006026 5.4e-123 445.7 566 49.5
FAN26G0646 Fragaria x ananassa HOM05D004344 ORTHO05D006026 5.4e-123 445.7 581 49.9
CAN.G370.49 Capsicum annuum HOM05D004344 ORTHO05D006026 7.1e-123 445.3 553 50.1
Dinv29997 Davidia involucrata HOM05D004344 ORTHO05D006026 1.2e-122 444.5 521 54.5
FAN23G1634 Fragaria x ananassa HOM05D004344 ORTHO05D006026 3.5e-122 443.0 566 49.3
CANSAT01G0155 Cannabis sativa HOM05D004344 ORTHO05D006026 6.0e-122 442.2 577 49.4
ClCG02G012370 Citrullus lanatus HOM05D004344 ORTHO05D006026 1.0e-121 441.4 577 48.9
FAN19G2019 Fragaria x ananassa HOM05D004344 ORTHO05D006026 1.7e-121 440.7 568 49.5
Sed0002898 Sechium edule HOM05D004344 ORTHO05D006026 1.7e-121 440.7 567 47.8
Sc03g0001670 Simmondsia chinensis HOM05D004344 ORTHO05D006026 5.1e-121 439.1 575 49.0
Haze_15381 Corylus avellana HOM05D004344 ORTHO05D006026 1.5e-120 437.6 573 48.5
Cpa.g.sc55.134 Carica papaya HOM05D004344 ORTHO05D006026 2.5e-120 436.8 573 48.3
Manes.13G122900 Manihot esculenta HOM05D004344 ORTHO05D006026 2.5e-120 436.8 567 48.0
MD15G1285400 Malus domestica HOM05D004344 ORTHO05D006026 3.3e-120 436.4 570 50.5
Atru.chr3.306 Acer truncatum HOM05D004344 ORTHO05D006026 8.1e-119 431.8 567 48.3
PGR102G1820 Punica granatum HOM05D004344 ORTHO05D006026 2.6e-117 426.8 565 49.7
Ciclev10024699m.g Citrus clementina HOM05D004344 ORTHO05D006026 2.2e-116 423.7 570 47.9
CiPaw.01G016700 Carya illinoinensis HOM05D004344 ORTHO05D006026 1.4e-115 421.0 586 49.3
Hund16343 Selenicereus undatus HOM05D004344 ORTHO05D006026 1.6e-114 417.5 573 48.0
AUR62001915 Chenopodium quinoa HOM05D004344 ORTHO05D006026 6.0e-114 415.6 563 46.2
Potri.007G045300 Populus trichocarpa HOM05D004344 ORTHO05D006026 1.6e-111 407.5 578 45.5
Sabra07G0040300 Salix brachista HOM05D004344 ORTHO05D006026 6.2e-111 405.6 576 45.3
PSO541G2052 Papaver somniferum HOM05D004344 ORTHO05D006026 1.4e-110 404.4 563 46.4
HanXRQChr14g0449061 Helianthus annuus HOM05D004344 ORTHO05D006026 2.4e-110 403.7 558 47.7
Lalb_Chr09g0323231 Lupinus albus HOM05D004344 ORTHO05D006026 9.0e-110 401.7 583 45.1
Eucgr.H01686 Eucalyptus grandis HOM05D004344 ORTHO05D006026 7.6e-109 398.7 573 46.9
Phvul.002G017900 Phaseolus vulgaris HOM05D004344 ORTHO05D006026 1.7e-108 397.5 571 45.2
THA.LOC104827210 Tarenaya hassleriana HOM05D004344 ORTHO05D006026 2.2e-108 397.1 582 44.8
Glyma.01G187400 Glycine max HOM05D004344 ORTHO05D006026 7.1e-107 392.1 569 45.0
Lj3g0019632 Lotus japonicus HOM05D004344 ORTHO05D006026 2.7e-106 390.2 567 46.0
PSO675G1845 Papaver somniferum HOM05D004344 ORTHO05D006026 1.0e-105 388.3 564 45.6
Lsat_1_v5_gn_2_84960 Lactuca sativa HOM05D004344 ORTHO05D006026 1.8e-105 387.5 555 46.8
TPR.G26904 Trifolium pratense HOM05D004344 ORTHO05D006026 6.7e-105 385.6 577 44.2
Ca_24759_v3 Cicer arietinum L. HOM05D004344 ORTHO05D006026 1.1e-104 384.8 570 45.1
VMungo1215G1933 Vigna mungo HOM05D004344 ORTHO05D006026 1.6e-103 380.9 574 44.4
Ah.03g145340 Amaranthus hybridus HOM05D004344 ORTHO05D006026 9.0e-102 375.2 542 44.6
ECA238G4385 Erigeron canadensis HOM05D004344 ORTHO05D006026 1.7e-100 370.9 561 45.5
Actinidia12045 Actinidia chinensis HOM05D004344 ORTHO05D006026 1.4e-99 367.9 564 45.6
Aqoxy7G02851 Aquilegia oxysepala HOM05D004344 ORTHO05D006026 7.1e-99 365.5 572 43.4
EL10Ac6g15730 Beta vulgaris HOM05D004344 ORTHO05D006026 6.0e-98 362.5 573 44.0
Duzib147G0141 Durio zibethinus HOM05D004344 ORTHO05D006026 1.0e-97 361.7 574 42.5
arahy.Tifrunner.gnm1.ann1.KW6QS2 Arachis hypogaea HOM05D004344 ORTHO05D006026 2.3e-97 360.5 607 43.2
AT5G67100 Arabidopsis thaliana HOM05D004344 ORTHO05D006026 6.7e-97 359.0 572 41.4
CARHR280550 Cardamine hirsuta HOM05D004344 ORTHO05D006026 1.9e-96 357.5 576 41.1
Gorai.007G214600 Gossypium raimondii HOM05D004344 ORTHO05D006026 5.7e-96 355.9 574 41.6
Gohir.A11G193200 Gossypium hirsutum HOM05D004344 ORTHO05D006026 9.6e-96 355.1 574 41.5
Gohir.D11G200300 Gossypium hirsutum HOM05D004344 ORTHO05D006026 1.6e-95 354.4 573 41.2
arahy.Tifrunner.gnm1.ann1.7M3CIR Arachis hypogaea HOM05D004344 ORTHO05D006026 2.1e-95 354.0 604 42.4
Thecc.01G058600 Theobroma cacao HOM05D004344 ORTHO05D006026 3.7e-95 353.2 577 43.8
Os01g0868300 Oryza sativa ssp. japonica HOM05D004344 ORTHO05D006026 3.1e-94 350.1 565 41.9
BolC7t42987H Brassica oleracea HOM05D004344 ORTHO05D006026 4.1e-94 349.7 575 41.0
arahy.Tifrunner.gnm1.ann1.EE0YL2 Arachis hypogaea HOM05D004344 ORTHO05D006026 6.9e-94 349.0 596 41.8
C07p24670 Brassica napus HOM05D004344 ORTHO05D006026 6.9e-94 349.0 577 41.2
AUR62003893 Chenopodium quinoa HOM05D004344 ORTHO05D006026 6.9e-94 349.0 558 41.0
Sp2g29580 Schrenkiella parvula HOM05D004344 ORTHO05D006026 1.5e-93 347.8 578 39.4
A07p16860 Brassica napus HOM05D004344 ORTHO05D006026 2.0e-93 347.4 575 41.4
AL8G44260 Arabidopsis lyrata HOM05D004344 ORTHO05D006026 3.4e-93 346.7 572 41.4
BraA07t29411Z Brassica rapa HOM05D004344 ORTHO05D006026 4.5e-93 346.3 571 41.9
Thhalv10003515m.g Eutrema salsugineum HOM05D004344 ORTHO05D006026 2.9e-92 343.6 580 40.2
Zm00001eb146610 Zea mays HOM05D004344 ORTHO05D006026 5.0e-92 342.8 562 42.5
Aa31LG1G15620 Aethionema arabicum HOM05D004344 ORTHO05D006026 1.1e-91 341.7 582 41.2
Psat2g166640 Pisum sativum HOM05D004344 ORTHO05D006026 1.4e-91 341.3 573 42.2
BcaC06g34790 Brassica carinata HOM05D004344 ORTHO05D006026 5.5e-91 339.3 574 40.2
RcHm_v2.0_Chr2g0117021 Rosa chinensis HOM05D004344 ORTHO05D006026 2.7e-90 337.0 457 48.4
Medtr5g017070 Medicago truncatula HOM05D004344 ORTHO05D006026 1.5e-88 331.3 574 40.8
Lj2g0014817 Lotus japonicus HOM05D004344 ORTHO05D006026 4.3e-88 329.7 570 42.6
Cfa004033 Carpinus fangiana HOM05D004344 ORTHO05D006026 4.8e-87 326.2 434 47.2
HPP92_025047 Vanilla planifolia HOM05D004344 ORTHO05D006026 1.4e-86 324.7 575 41.0
ATR0584G066 Amborella trichopoda HOM05D004344 ORTHO05D006026 1.8e-86 324.3 567 38.4
COL.COLO4_11441 Corchorus olitorius HOM05D004344 ORTHO05D006026 9.4e-83 312.0 573 40.7
Nn5g30338 Nelumbo nucifera HOM05D004344 ORTHO05D006026 1.5e-80 304.7 418 47.1
Carub.0008s0466 Capsella rubella HOM05D004344 ORTHO05D006026 3.3e-80 303.5 566 37.8
VMungo0464G2085 Vigna mungo HOM05D004344 ORTHO05D006026 1.3e-79 301.6 571 39.2
TPR.G16152 Trifolium pratense HOM05D004344 ORTHO05D006026 1.5e-77 294.7 569 38.3
AL8G20700 Arabidopsis lyrata HOM05D004344 ORTHO05D006026 1.3e-76 291.6 563 36.1
CDE04G1072 Ceratophyllum demersum HOM05D004344 ORTHO05D006026 9.7e-72 275.4 557 39.7
MD02G1174200 Malus domestica HOM05D004344 ORTHO05D006026 1.9e-67 261.2 290 50.7
Pp3c1_21120 Physcomitrium patens HOM05D004344 ORTHO05D006026 2.5e-67 260.8 574 34.3
SHI09544 Sapria himalayana HOM05D004344 ORTHO05D006026 9.7e-64 248.8 579 34.9
SEGI_19753 Sequoiadendron giganteum HOM05D004344 ORTHO05D006026 7.7e-61 239.2 541 36.2
Carub.0008s2741 Capsella rubella HOM05D004344 ORTHO05D006026 5.0e-60 236.5 417 37.9
SMO144G0147 Selaginella moellendorffii HOM05D004344 ORTHO05D006026 6.1e-58 229.6 559 32.6
BcaB02g09958 Brassica carinata HOM05D004344 ORTHO05D006026 4.4e-56 223.4 413 39.0
Mapoly0074s0003 Marchantia polymorpha HOM05D004344 ORTHO05D006026 3.7e-55 220.3 574 30.7
BcaC03g17194 Brassica carinata HOM05D004344 ORTHO05D006026 7.0e-54 216.1 567 32.3
C02p51210 Brassica napus HOM05D004344 ORTHO05D006026 7.0e-54 216.1 567 32.3
BolC2t11212H Brassica oleracea HOM05D004344 ORTHO05D006026 9.1e-54 215.7 567 32.3
AagrBONN_evm.TU.Sc2ySwM_344.2703__2704 Anthoceros agrestis HOM05D004344 ORTHO05D006026 2.9e-52 210.7 569 30.4
CARHR066690 Cardamine hirsuta HOM05D004344 ORTHO05D006026 2.2e-47 194.5 245 42.9
Hma1.2p1_0017F.1_g011500 Hydrangea macrophylla HOM05D004344 ORTHO05D006026 3.5e-45 187.2 172 57.0
AL8G22110 Arabidopsis lyrata HOM05D004344 ORTHO05D006026 4.5e-45 186.8 399 32.8
BraA02t08352Z Brassica rapa HOM05D004344 ORTHO05D006026 4.5e-45 186.8 453 31.8
A02p33280 Brassica napus HOM05D004344 ORTHO05D006026 1.0e-44 185.7 458 31.4
SEGI_41015 Sequoiadendron giganteum HOM05D004344 ORTHO05D006026 6.1e-42 176.4 437 33.4
AL74U10010 Arabidopsis lyrata HOM05D004344 ORTHO05D006026 5.9e-37 159.8 391 33.2
RcHm_v2.0_Chr4g0394581 Rosa chinensis HOM05D004344 ORTHO05D006026 1.0e-36 159.1 158 58.2
AagrBONN_evm.TU.Sc2ySwM_344.2706 Anthoceros agrestis HOM05D004344 ORTHO05D006026 6.8e-33 146.4 204 39.7
PRCOL_00001322 Prasinoderma coloniale HOM05D004344 ORTHO05D006026 7.0e-30 136.3 571 24.3
CBR_g30807 Chara braunii HOM05D000019 ORTHO05D000048 3.9e-28 130.6 718 26.9
MCO16G420 Micromonas commoda HOM05D004344 ORTHO05D006026 1.9e-22 111.7 609 25.8
arahy.Tifrunner.gnm1.ann1.HEV3CF Arachis hypogaea HOM05D000969 ORTHO05D011765 2.1e-21 108.2 154 41.6
MD02G1174100 Malus domestica HOM05D004344 ORTHO05D006026 4.6e-21 107.1 127 52.8
AagrBONN_evm.TU.Sc2ySwM_340.1626 Anthoceros agrestis HOM05D004344 ORTHO05D006026 7.6e-16 89.7 182 33.5
Lsat_1_v5_gn_4_154100 Lactuca sativa HOM05D002445 ORTHO05D002690 1.7e-12 78.6 121 44.6
SMO229G0008 Selaginella moellendorffii HOM05D004344 ORTHO05D006026 2.3e-12 78.2 57 56.1
Cre04.g214350 Chlamydomonas reinhardtii HOM05D004344 ORTHO05D006026 3.2e-06 57.8 632 21.0
RcHm_v2.0_Chr2g0109901 Rosa chinensis HOM05D004344 ORTHO05D006026 3.2e-06 57.8 42 61.9
TAR628G1372 Trochodendron aralioides HOM05D004344 ORTHO05D021344 4.2e-06 57.4 84 41.7
Lsat_1_v5_gn_2_56220 Lactuca sativa HOM05D000161 ORTHO05D229717 5.4e-06 57.0 83 47.0


User provided reference genes

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