Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020881.1 Olea europaea HOM05D005357 ORTHO05D006354 2.0e-34 148.7 81 100.0
Oeu055280.1 Olea europaea HOM05D005357 ORTHO05D006354 2.0e-34 148.7 81 100.0
CAN.G284.13 Capsicum annuum HOM05D005357 ORTHO05D006354 6.0e-15 84.0 80 55.0
SalBow3G4061 Salvia bowleyana HOM05D005357 ORTHO05D006354 1.7e-14 82.4 77 58.4
Nitab4.5_0006254g0010 Nicotiana tabacum HOM05D005357 ORTHO05D006354 2.3e-14 82.0 80 57.5
Nitab4.5_0000008g0560 Nicotiana tabacum HOM05D005357 ORTHO05D006354 8.6e-14 80.1 81 53.1
Dinv37091 Davidia involucrata HOM05D005357 ORTHO05D006354 1.5e-13 79.3 81 63.0
Peaxi162Scf00141g00133 Petunia axillaris HOM05D005357 ORTHO05D006354 3.3e-13 78.2 82 56.1
CiPaw.09G205000 Carya illinoinensis HOM05D005357 ORTHO05D006354 4.3e-13 77.8 81 56.8
Oeu044369.1 Olea europaea HOM05D005357 ORTHO05D006354 7.3e-13 77.0 35 100.0
PGSC0003DMG400002411 Solanum tuberosum HOM05D005357 ORTHO05D006354 9.5e-13 76.6 82 51.2
Thecc.05G023500 Theobroma cacao HOM05D005357 ORTHO05D006354 1.2e-12 76.3 81 54.3
COL.COLO4_14619 Corchorus olitorius HOM05D005357 ORTHO05D006354 2.8e-12 75.1 81 55.6
QL07p036221 Quercus lobata HOM05D005357 ORTHO05D006354 3.6e-12 74.7 80 60.0
Actinidia29139 Actinidia chinensis HOM05D005357 ORTHO05D006354 4.7e-12 74.3 81 53.1
Cfa017262 Carpinus fangiana HOM05D005357 ORTHO05D006354 4.7e-12 74.3 81 55.6
MSTRG.5603 Avicennia marina HOM05D005357 ORTHO05D006354 1.1e-11 73.2 80 55.0
PGSC0003DMG402020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 1.1e-11 73.2 82 51.2
Hma1.2p1_0703F.1_g206335 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 2.3e-11 72.0 81 53.1
Dinv03649 Davidia involucrata HOM05D005357 ORTHO05D006354 3.1e-11 71.6 81 50.6
Duzib093G0024 Durio zibethinus HOM05D005357 ORTHO05D006354 3.1e-11 71.6 81 51.9
Eucgr.B02762 Eucalyptus grandis HOM05D005357 ORTHO05D006354 5.2e-11 70.9 81 54.3
Haze_20938 Corylus avellana HOM05D005357 ORTHO05D006354 6.8e-11 70.5 81 48.1
Atru.chr8.2135 Acer truncatum HOM05D005357 ORTHO05D006354 8.9e-11 70.1 81 55.6
Actinidia13789 Actinidia chinensis HOM05D005357 ORTHO05D006354 1.2e-10 69.7 81 48.1
Lj2A78G31 Lonicera japonica HOM05D005357 ORTHO05D006354 1.3e-09 66.2 76 50.0
Potri.006G095600 Populus trichocarpa HOM05D005357 ORTHO05D006354 1.7e-09 65.9 81 53.1
Ciclev10011563m.g Citrus clementina HOM05D005357 ORTHO05D006354 2.2e-09 65.5 81 51.9
Nn1g02852 Nelumbo nucifera HOM05D005357 ORTHO05D006354 2.9e-09 65.1 82 50.0
Cc06_g01760 Coffea canephora HOM05D005357 ORTHO05D006354 3.7e-09 64.7 81 48.1
unitig_22.g6590 Utricularia gibba HOM05D005357 ORTHO05D006354 3.7e-09 64.7 81 46.9
Duzib106G1773 Durio zibethinus HOM05D005357 ORTHO05D006354 4.9e-09 64.3 81 49.4
arahy.Tifrunner.gnm1.ann1.5ZZ6F4 Arachis hypogaea HOM05D005357 ORTHO05D006354 6.4e-09 63.9 75 48.0
Migut.J00234 Erythranthe guttata HOM05D005357 ORTHO05D006354 6.4e-09 63.9 64 46.9
Gohir.D09G158500 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.1e-08 63.2 81 43.2
PGR031G1436 Punica granatum HOM05D005357 ORTHO05D006354 1.4e-08 62.8 80 46.2
Hma1.2p1_0125F.1_g058510 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 1.9e-08 62.4 80 47.5
arahy.Tifrunner.gnm1.ann1.H8VZ0K Arachis hypogaea HOM05D005357 ORTHO05D006354 2.4e-08 62.0 75 46.7
CSS0020158 Camellia sinensis var. sinensis HOM05D005357 ORTHO05D006354 3.2e-08 61.6 81 51.9
Sabra06G0073400 Salix brachista HOM05D005357 ORTHO05D006354 5.4e-08 60.8 81 46.9
Lalb_Chr03g0042941 Lupinus albus HOM05D005357 ORTHO05D006354 7.1e-08 60.5 76 44.7
VMungo1383G1762 Vigna mungo HOM05D005357 ORTHO05D006354 7.1e-08 60.5 76 50.0
CANSAT35G1827 Cannabis sativa HOM05D005357 ORTHO05D006354 9.2e-08 60.1 71 52.1
Manes.08G086900 Manihot esculenta HOM05D005357 ORTHO05D006354 1.2e-07 59.7 81 51.9
Phvul.008G108800 Phaseolus vulgaris HOM05D005357 ORTHO05D006354 2.1e-07 58.9 76 53.9
Lalb_Chr01g0022881 Lupinus albus HOM05D005357 ORTHO05D006354 7.8e-07 57.0 77 45.5
Gohir.A09G163000 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.3e-06 56.2 81 46.9
Gorai.006G180200 Gossypium raimondii HOM05D005357 ORTHO05D006354 1.3e-06 56.2 81 45.7
Glyma.07G144300 Glycine max HOM05D005357 ORTHO05D006354 1.7e-06 55.8 76 51.3
Glyma.18G195500 Glycine max HOM05D005357 ORTHO05D006354 1.7e-06 55.8 76 52.6
Glyma.18G195800 Glycine max HOM05D005357 ORTHO05D006354 1.7e-06 55.8 76 52.6
vmacro01296 Vaccinium macrocarpon HOM05D005357 ORTHO05D006354 2.3e-06 55.5 83 47.0
Lj3g0024478 Lotus japonicus HOM05D005357 ORTHO05D006354 6.6e-06 53.9 67 49.3


User provided reference genes

Program Settings