Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019361.1 Olea europaea HOM05D007448 ORTHO05D009392 7.6e-26 119.8 63 100.0
Hma1.2p1_1003F.1_g246780 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 1.8e-19 98.6 63 82.5
Hma1.2p1_1488F.1_g286625 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 1.8e-19 98.6 63 82.5
HanXRQChr08g0234641 Helianthus annuus HOM05D007448 ORTHO05D009392 3.1e-19 97.8 63 79.4
Sabra16G0269700 Salix brachista HOM05D007448 ORTHO05D009392 9.0e-19 96.3 62 75.8
Nn1g03921 Nelumbo nucifera HOM05D007448 ORTHO05D009392 1.2e-18 95.9 63 77.8
Manes.03G111700 Manihot esculenta HOM05D007448 ORTHO05D009392 1.5e-18 95.5 62 79.0
Lsat_1_v5_gn_5_6900 Lactuca sativa HOM05D007448 ORTHO05D009392 2.0e-18 95.1 63 77.8
Potri.001G406200 Populus trichocarpa HOM05D007448 ORTHO05D009392 2.6e-18 94.7 62 75.8
Gohir.A13G143800 Gossypium hirsutum HOM05D007448 ORTHO05D009392 5.9e-18 93.6 63 76.2
Gohir.D13G148600 Gossypium hirsutum HOM05D007448 ORTHO05D009392 5.9e-18 93.6 63 76.2
PGR083G2019 Punica granatum HOM05D007448 ORTHO05D009392 5.9e-18 93.6 63 74.6
Thecc.07G071800 Theobroma cacao HOM05D007448 ORTHO05D009392 5.9e-18 93.6 63 76.2
Ciclev10010083m.g Citrus clementina HOM05D007448 ORTHO05D009392 7.6e-18 93.2 63 76.2
Duzib213G0053 Durio zibethinus HOM05D007448 ORTHO05D009392 7.6e-18 93.2 63 76.2
Nitab4.5_0000639g0040 Nicotiana tabacum HOM05D007448 ORTHO05D009392 7.6e-18 93.2 62 74.2
Atru.chr4.846 Acer truncatum HOM05D007448 ORTHO05D009392 1.0e-17 92.8 63 74.6
Ciclev10010683m.g Citrus clementina HOM05D007448 ORTHO05D009392 1.0e-17 92.8 63 74.6
Rhsim04G0017500 Rhododendron simsii HOM05D007448 ORTHO05D009392 1.3e-17 92.4 59 78.0
GSVIVG01014426001 Vitis vinifera HOM05D007448 ORTHO05D009392 1.3e-17 92.4 63 74.6
Gorai.013G166400 Gossypium raimondii HOM05D007448 ORTHO05D009392 1.7e-17 92.0 63 74.6
CiPaw.11G176100 Carya illinoinensis HOM05D007448 ORTHO05D009392 2.2e-17 91.7 63 74.6
DCAR_021403 Daucus carota HOM05D007448 ORTHO05D009392 2.9e-17 91.3 63 76.2
Eucgr.F01082 Eucalyptus grandis HOM05D007448 ORTHO05D009392 3.8e-17 90.9 63 71.4
Nitab4.5_0008360g0010 Nicotiana tabacum HOM05D007448 ORTHO05D009392 5.0e-17 90.5 62 72.6
Peaxi162Scf00000g00504 Petunia axillaris HOM05D007448 ORTHO05D009392 6.5e-17 90.1 61 72.1
RcHm_v2.0_Chr5g0035321 Rosa chinensis HOM05D007448 ORTHO05D009392 8.5e-17 89.7 63 73.0
Sopen12g006840 Solanum pennellii HOM05D007448 ORTHO05D009392 8.5e-17 89.7 62 72.6
PGSC0003DMG400008573 Solanum tuberosum HOM05D007448 ORTHO05D009392 8.5e-17 89.7 62 72.6
Cpa.g.sc80.111 Carica papaya HOM05D007448 ORTHO05D009392 1.1e-16 89.4 63 71.4
Migut.M00875 Erythranthe guttata HOM05D007448 ORTHO05D009392 1.4e-16 89.0 63 73.0
FvH4_3g20900 Fragaria vesca HOM05D007448 ORTHO05D009392 1.4e-16 89.0 63 73.0
FAN25G3793 Fragaria x ananassa HOM05D007448 ORTHO05D009392 1.4e-16 89.0 63 73.0
Solyc12g013500.2 Solanum lycopersicum HOM05D007448 ORTHO05D009392 1.4e-16 89.0 62 71.0
MD03G1219500 Malus domestica HOM05D007448 ORTHO05D009392 1.9e-16 88.6 63 69.8
ClCG11G018440 Citrullus lanatus HOM05D007448 ORTHO05D009392 2.5e-16 88.2 63 71.4
Cfa020508 Carpinus fangiana HOM05D007448 ORTHO05D009392 4.2e-16 87.4 62 69.4
AUR62015605 Chenopodium quinoa HOM05D007448 ORTHO05D009392 4.2e-16 87.4 63 69.8
MELO3C018199.2 Cucumis melo HOM05D003028 ORTHO05D003465 4.2e-16 87.4 60 71.7
ECA246G0067 Erigeron canadensis HOM05D007448 ORTHO05D009392 5.5e-16 87.0 65 72.3
FAN21G3287 Fragaria x ananassa HOM05D007448 ORTHO05D009392 5.5e-16 87.0 63 71.4
Prupe.4G189600 Prunus persica HOM05D007448 ORTHO05D009392 5.5e-16 87.0 63 69.8
Sc03g0009610 Simmondsia chinensis HOM05D007448 ORTHO05D009392 5.5e-16 87.0 63 69.8
vmacro09556 Vaccinium macrocarpon HOM05D007448 ORTHO05D009392 5.5e-16 87.0 59 72.9
Phvul.011G154800 Phaseolus vulgaris HOM05D007448 ORTHO05D009392 9.3e-16 86.3 60 71.7
CANSAT11G1525 Cannabis sativa HOM05D007448 ORTHO05D009392 1.2e-15 85.9 61 72.1
Glyma.06G253900 Glycine max HOM05D007448 ORTHO05D009392 1.2e-15 85.9 60 70.0
Sed0026843 Sechium edule HOM05D007448 ORTHO05D009392 2.1e-15 85.1 63 69.8
PSO421G0428 Papaver somniferum HOM05D007448 ORTHO05D009392 2.7e-15 84.7 58 70.7
Cc06_g05250 Coffea canephora HOM05D007448 ORTHO05D009392 3.6e-15 84.3 62 71.0
CsaV3_3G044380 Cucumis sativus L. HOM05D007448 ORTHO05D009392 3.6e-15 84.3 63 66.7
unitig_899.g15312 Utricularia gibba HOM05D007448 ORTHO05D009392 3.6e-15 84.3 63 66.7
Actinidia18748 Actinidia chinensis HOM05D007448 ORTHO05D009392 1.0e-14 82.8 55 74.5
TWI39G0054 Tripterygium wilfordii HOM05D007448 ORTHO05D009392 1.8e-14 82.0 63 66.7
arahy.Tifrunner.gnm1.ann1.UX5IA9 Arachis hypogaea HOM05D007448 ORTHO05D009392 3.0e-14 81.3 60 68.3
arahy.Tifrunner.gnm1.ann1.GZ4R1Y Arachis hypogaea HOM05D007448 ORTHO05D009392 1.1e-13 79.3 60 65.0
TPR.G23252 Trifolium pratense HOM05D007448 ORTHO05D009392 1.1e-13 79.3 60 65.0
CDE02G3786 Ceratophyllum demersum HOM05D007448 ORTHO05D009392 1.5e-13 79.0 63 61.9
Gorai.007G085800 Gossypium raimondii HOM05D007448 ORTHO05D009392 1.9e-13 78.6 63 66.7
Lj3g0013278 Lotus japonicus HOM05D007448 ORTHO05D009392 1.9e-13 78.6 60 65.0
Psat3g145520 Pisum sativum HOM05D007448 ORTHO05D009392 1.9e-13 78.6 60 66.7
Gohir.A11G075500 Gossypium hirsutum HOM05D007448 ORTHO05D009392 3.3e-13 77.8 63 66.7
Os03g0581650 Oryza sativa ssp. japonica HOM05D007448 ORTHO05D009392 3.3e-13 77.8 59 66.1
THA.LOC104822630 Tarenaya hassleriana HOM05D007448 ORTHO05D009392 3.3e-13 77.8 63 63.5
Medtr7g057740 Medicago truncatula HOM05D007448 ORTHO05D009392 4.3e-13 77.4 58 62.1
Oeu006763.2 Olea europaea HOM05D007448 ORTHO05D009392 4.3e-13 77.4 44 90.9
Aqoxy4G01379 Aquilegia oxysepala HOM05D007448 ORTHO05D009392 7.4e-13 76.6 66 63.6
A07p06520 Brassica napus HOM05D007448 ORTHO05D009392 1.3e-12 75.9 63 61.9
BraA07t28447Z Brassica rapa HOM05D007448 ORTHO05D009392 1.3e-12 75.9 63 61.9
Thhalv10021866m.g Eutrema salsugineum HOM05D007448 ORTHO05D009392 1.3e-12 75.9 63 61.9
Sp3g23710 Schrenkiella parvula HOM05D007448 ORTHO05D009392 1.6e-12 75.5 63 61.9
QL08p018291 Quercus lobata HOM05D007448 ORTHO05D009392 3.7e-12 74.3 53 66.0
BcaC06g35910 Brassica carinata HOM05D007448 ORTHO05D009392 6.3e-12 73.6 63 60.3
BolC7t41418H Brassica oleracea HOM05D007448 ORTHO05D009392 6.3e-12 73.6 63 60.3
CDE05G1526 Ceratophyllum demersum HOM05D007448 ORTHO05D009392 1.4e-11 72.4 61 59.0
BcaB06g26831 Brassica carinata HOM05D007448 ORTHO05D009392 1.8e-11 72.0 63 58.7
CSS0027029 Camellia sinensis var. sinensis HOM05D007448 ORTHO05D009392 1.8e-11 72.0 44 81.8
Zm00001eb049080 Zea mays HOM05D007448 ORTHO05D009392 1.8e-11 72.0 59 61.0
AL3G25660 Arabidopsis lyrata HOM05D007448 ORTHO05D009392 6.9e-11 70.1 63 58.7
Carub.0003s1319 Capsella rubella HOM05D007448 ORTHO05D009392 6.9e-11 70.1 63 58.7
AT3G13677 Arabidopsis thaliana HOM05D007448 ORTHO05D009392 1.2e-10 69.3 63 58.7
SalBow8G2366 Salvia bowleyana HOM05D007448 ORTHO05D009392 1.2e-10 69.3 44 79.5
Aa31LG8G850 Aethionema arabicum HOM05D007448 ORTHO05D009392 5.9e-10 67.0 63 57.1
EL10Ac4g09050 Beta vulgaris HOM05D007448 ORTHO05D009392 7.7e-10 66.6 44 72.7
Lalb_Chr03g0030401 Lupinus albus HOM05D007448 ORTHO05D009392 1.7e-09 65.5 60 56.7
Ah.06g183620 Amaranthus hybridus HOM05D007448 ORTHO05D009392 2.9e-09 64.7 45 68.9
TAR626G0388 Trochodendron aralioides HOM05D007448 ORTHO05D009392 2.9e-09 64.7 44 70.5
AUR62035371 Chenopodium quinoa HOM05D007448 ORTHO05D009392 1.1e-08 62.8 53 58.5
AUR62035373 Chenopodium quinoa HOM05D007448 ORTHO05D009392 1.1e-08 62.8 53 58.5
CAN.G1320.10 Capsicum annuum HOM05D007448 ORTHO05D009392 1.4e-08 62.4 44 70.5
FAN11G2341 Fragaria x ananassa HOM05D007448 ORTHO05D009392 1.4e-08 62.4 44 72.7
Glyma.12G147500 Glycine max HOM05D007448 ORTHO05D009392 1.4e-08 62.4 41 73.2
MSTRG.14378 Avicennia marina HOM05D007448 ORTHO05D009392 1.9e-08 62.0 44 70.5
C07p09790 Brassica napus HOM05D004899 ORTHO05D006580 3.2e-08 61.2 57 59.6
AUR62029317 Chenopodium quinoa HOM05D007448 ORTHO05D009392 4.2e-08 60.8 56 55.4
Pp3c7_12690 Physcomitrium patens HOM05D007448 ORTHO05D009392 5.5e-08 60.5 61 50.8
Pp3c3_18440 Physcomitrium patens HOM05D007448 ORTHO05D009392 1.0e-06 56.2 58 51.7
Atru.chr2.2826 Acer truncatum HOM05D007448 ORTHO05D009392 1.4e-06 55.8 62 58.1
Hund02207 Selenicereus undatus HOM05D007448 ORTHO05D009392 1.4e-06 55.8 44 65.9
Migut.H01905 Erythranthe guttata HOM05D007448 ORTHO05D009392 6.7e-06 53.5 36 69.4
Mapoly0162s0010 Marchantia polymorpha HOM05D007448 ORTHO05D009392 6.7e-06 53.5 61 49.2


User provided reference genes

Program Settings