Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 2.4e-57 225.7 113 100.0
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 1.6e-34 149.8 113 65.5
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 2.8e-34 149.1 113 67.3
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 2.2e-31 139.4 110 62.7
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 2.3e-28 129.4 108 62.0
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 3.0e-28 129.0 114 59.6
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 3.0e-28 129.0 115 60.9
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 3.0e-28 129.0 110 62.7
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 6.7e-28 127.9 116 56.9
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 1.1e-27 127.1 114 57.9
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.0e-27 126.3 112 59.8
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 2.6e-27 125.9 122 56.6
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 2.6e-27 125.9 114 58.8
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 3.3e-27 125.6 125 56.0
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 4.4e-27 125.2 112 58.0
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 4.4e-27 125.2 115 58.3
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 4.4e-27 125.2 114 59.6
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 5.7e-27 124.8 113 58.4
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 5.7e-27 124.8 126 54.8
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 9.7e-27 124.0 119 56.3
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 9.7e-27 124.0 114 58.8
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 2.2e-26 122.9 121 56.2
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 3.7e-26 122.1 122 55.7
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.7e-26 122.1 114 54.4
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 6.3e-26 121.3 108 58.3
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.4e-25 120.2 124 53.2
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.4e-25 120.2 124 53.2
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 1.4e-25 120.2 113 54.9
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 1.8e-25 119.8 110 60.0
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 4.1e-25 118.6 125 52.8
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 5.3e-25 118.2 124 54.0
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 5.3e-25 118.2 112 56.2
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 5.3e-25 118.2 115 51.3
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 6.9e-25 117.9 124 54.0
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 6.9e-25 117.9 121 54.5
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 9.1e-25 117.5 124 54.0
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.5e-24 116.7 124 53.2
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.5e-24 116.7 124 53.2
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 2.0e-24 116.3 108 58.3
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 2.0e-24 116.3 123 55.3
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.0e-24 116.3 124 53.2
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.0e-24 116.3 124 53.2
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.6e-24 115.9 124 51.6
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 4.5e-24 115.2 79 65.8
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 7.7e-24 114.4 115 53.9
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 7.7e-24 114.4 116 50.0
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 1.0e-23 114.0 125 48.0
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.3e-23 113.6 110 53.6
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 1.7e-23 113.2 132 51.5
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 2.9e-23 112.5 103 59.2
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 2.9e-23 112.5 119 52.9
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.8e-23 112.1 124 51.6
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 6.5e-23 111.3 83 63.9
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 1.4e-22 110.2 113 57.5
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 1.4e-22 110.2 116 50.0
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 1.9e-22 109.8 113 57.5
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 1.9e-22 109.8 116 50.9
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 2.5e-22 109.4 111 51.4
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 5.5e-22 108.2 117 52.1
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 7.2e-22 107.8 120 52.5
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 1.2e-21 107.1 114 51.8
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 7.9e-21 104.4 116 51.7
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 1.4e-20 103.6 119 47.1
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 1.8e-20 103.2 83 60.2
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 2.3e-20 102.8 122 48.4
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 3.9e-20 102.1 84 53.6
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 5.2e-20 101.7 122 47.5
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 1.1e-19 100.5 126 46.0
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 1.1e-19 100.5 121 47.9
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 1.1e-19 100.5 120 50.8
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.1e-19 100.5 121 44.6
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 1.5e-19 100.1 86 57.0
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 1.5e-19 100.1 103 46.6
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 2.0e-19 99.8 123 48.0
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 2.0e-19 99.8 106 47.2
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 5.7e-19 98.2 122 45.1
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 5.7e-19 98.2 121 43.0
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 5.7e-19 98.2 110 50.9
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 1.7e-18 96.7 120 47.5
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 2.2e-18 96.3 121 44.6
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 2.2e-18 96.3 112 44.6
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 4.8e-18 95.1 120 45.0
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 4.8e-18 95.1 121 45.5
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 4.8e-18 95.1 121 45.5
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 4.8e-18 95.1 68 67.6
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 1.4e-17 93.6 121 45.5
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 1.4e-17 93.6 121 45.5
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 1.4e-17 93.6 121 45.5
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 1.4e-17 93.6 114 48.2
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.4e-17 93.6 111 49.5
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 1.8e-17 93.2 113 48.7
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 2.4e-17 92.8 122 45.1
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 3.1e-17 92.4 117 45.3
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 3.1e-17 92.4 113 47.8
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 4.1e-17 92.0 67 68.7
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 9.1e-17 90.9 114 43.9
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.7e-15 86.7 74 55.4
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 1.5e-14 83.6 108 43.5
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 3.2e-14 82.4 104 43.3
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 4.2e-14 82.0 102 43.1
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 9.7e-11 70.9 106 39.6
Rhsim06G0199500 Rhododendron simsii HOM05D003240 ORTHO05D009426 1.6e-08 63.5 121 36.4
Potri.010G228100 Populus trichocarpa HOM05D002014 ORTHO05D001958 1.9e-06 56.6 105 39.0
Aqoxy4G01492 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 7.2e-06 54.7 83 44.6
Potri.004G007000 Populus trichocarpa HOM05D002014 ORTHO05D001958 7.2e-06 54.7 116 37.9
Thecc.06G225900 Theobroma cacao HOM05D002014 ORTHO05D001958 9.4e-06 54.3 77 45.5


User provided reference genes

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