Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016616.1 Olea europaea HOM05D007215 ORTHO05D009019 3.0e-91 338.6 180 100.0
Oeu016617.1 Olea europaea HOM05D007215 ORTHO05D009019 3.0e-91 338.6 180 100.0
Oeu021574.1 Olea europaea HOM05D007215 ORTHO05D009019 2.3e-59 232.6 178 72.5
DCAR_027521 Daucus carota HOM05D007215 ORTHO05D009019 6.1e-52 208.0 175 64.0
Oeu015716.1 Olea europaea HOM05D007215 ORTHO05D009019 8.2e-49 197.6 167 67.1
VMungo0251G1340 Vigna mungo HOM05D007215 ORTHO05D009019 4.1e-48 195.3 168 63.7
Peaxi162Scf00180g00003 Petunia axillaris HOM05D007215 ORTHO05D009019 7.0e-48 194.5 170 63.5
Lj6P222T10 Lonicera japonica HOM05D007215 ORTHO05D009019 2.0e-47 193.0 170 62.9
EL10Ac3g06096 Beta vulgaris HOM05D007215 ORTHO05D009019 5.9e-47 191.4 178 61.2
Phvul.003G297000 Phaseolus vulgaris HOM05D007215 ORTHO05D009019 1.7e-46 189.9 169 61.5
Hma1.2p1_0150F.1_g066880 Hydrangea macrophylla HOM05D007215 ORTHO05D009019 3.8e-46 188.7 146 71.9
Ah.07g202820 Amaranthus hybridus HOM05D007215 ORTHO05D009019 8.5e-46 187.6 166 63.9
Sc25g0002820 Simmondsia chinensis HOM05D007215 ORTHO05D009019 1.1e-45 187.2 184 58.2
MSTRG.9732 Avicennia marina HOM05D007215 ORTHO05D009019 1.5e-45 186.8 172 62.8
Peaxi162Scf00483g00061 Petunia axillaris HOM05D007215 ORTHO05D009019 2.5e-45 186.0 174 61.5
Psat7g121080 Pisum sativum HOM05D007215 ORTHO05D009019 2.5e-45 186.0 170 62.4
Potri.019G112300 Populus trichocarpa HOM05D007215 ORTHO05D009019 2.5e-45 186.0 191 58.6
Glyma.02G137900 Glycine max HOM05D007215 ORTHO05D009019 4.2e-45 185.3 172 60.5
Lju470C16T0 Lonicera japonica HOM05D007215 ORTHO05D009019 5.5e-45 184.9 164 64.6
QL10p055936 Quercus lobata HOM05D007215 ORTHO05D009019 9.4e-45 184.1 172 59.9
SGA_v2.0_scaffold12G06193 Striga asiatica HOM05D007215 ORTHO05D009019 1.6e-44 183.3 179 63.1
CSS0011584 Camellia sinensis var. sinensis HOM05D007215 ORTHO05D009019 3.6e-44 182.2 169 62.1
Manes.11G128800 Manihot esculenta HOM05D007215 ORTHO05D009019 4.7e-44 181.8 181 59.7
Glyma.07G207400 Glycine max HOM05D007215 ORTHO05D009019 4.0e-43 178.7 165 60.0
Medtr4g087380 Medicago truncatula HOM05D007215 ORTHO05D009019 6.7e-43 177.9 170 60.0
Sabra19G0108300 Salix brachista HOM05D007215 ORTHO05D009019 2.6e-42 176.0 193 57.0
Gohir.A10G144100 Gossypium hirsutum HOM05D007215 ORTHO05D009019 1.7e-41 173.3 139 66.9
Gorai.011G135400 Gossypium raimondii HOM05D007215 ORTHO05D009019 1.7e-41 173.3 139 67.6
Dinv33208 Davidia involucrata HOM05D007215 ORTHO05D009019 2.8e-41 172.6 166 60.2
Cc03_g14170 Coffea canephora HOM05D007215 ORTHO05D009019 3.7e-41 172.2 170 60.0
Atru.chr4.1429 Acer truncatum HOM05D007215 ORTHO05D009019 4.8e-41 171.8 191 59.2
MSTRG.4303 Avicennia marina HOM05D007215 ORTHO05D009019 8.2e-41 171.0 170 60.0
Haze_01356 Corylus avellana HOM05D007215 ORTHO05D009019 1.4e-40 170.2 161 60.2
ClCG06G001110 Citrullus lanatus HOM05D007215 ORTHO05D009019 3.1e-40 169.1 187 58.3
Lalb_Chr05g0218881 Lupinus albus HOM05D007215 ORTHO05D009019 9.1e-40 167.5 167 58.1
Cpa.g.sc9.370 Carica papaya HOM05D007215 ORTHO05D009019 1.2e-39 167.2 155 61.3
TPR.G23547 Trifolium pratense HOM05D002328 ORTHO05D009019 1.2e-39 167.2 176 56.2
Cfa015271 Carpinus fangiana HOM05D007215 ORTHO05D009019 2.0e-39 166.4 155 63.2
RcHm_v2.0_Chr4g0405921 Rosa chinensis HOM05D007215 ORTHO05D009019 3.5e-39 165.6 182 53.3
Sed0003072 Sechium edule HOM05D007215 ORTHO05D009019 7.7e-39 164.5 180 56.1
FAN17G2642 Fragaria x ananassa HOM05D007215 ORTHO05D009019 2.2e-38 162.9 186 52.2
AUR62023787 Chenopodium quinoa HOM05D007215 ORTHO05D009019 3.8e-38 162.2 161 58.4
AUR62002398 Chenopodium quinoa HOM05D007215 ORTHO05D009019 8.5e-38 161.0 160 56.9
Aqoxy2G03930 Aquilegia oxysepala HOM05D007215 ORTHO05D009019 1.1e-37 160.6 150 56.0
Lalb_Chr09g0328091 Lupinus albus HOM05D007215 ORTHO05D009019 1.1e-37 160.6 169 56.2
FAN22G1962 Fragaria x ananassa HOM05D007215 ORTHO05D009019 9.4e-37 157.5 167 53.9
FvH4_4g10370 Fragaria vesca HOM05D007215 ORTHO05D009019 1.6e-36 156.8 187 50.8
Duzib151G0080 Durio zibethinus HOM05D007215 ORTHO05D009019 3.0e-35 152.5 191 50.3
Duzib268G1282 Durio zibethinus HOM05D007215 ORTHO05D009019 4.0e-35 152.1 135 64.4
CiPaw.02G100200 Carya illinoinensis HOM05D007215 ORTHO05D009019 1.2e-34 150.6 190 55.8
Prupe.1G207500 Prunus persica HOM05D007215 ORTHO05D009019 1.2e-34 150.6 196 48.0
MD04G1049300 Malus domestica HOM05D007215 ORTHO05D009019 1.5e-34 150.2 144 59.0
CAN.G136.10 Capsicum annuum HOM05D007215 ORTHO05D009019 5.7e-34 148.3 174 53.4
HanXRQChr04g0110541 Helianthus annuus HOM05D007215 ORTHO05D009019 1.3e-33 147.1 139 60.4
TAR362G0943 Trochodendron aralioides HOM05D007215 ORTHO05D009019 2.2e-33 146.4 149 58.4
THA.LOC104804037 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 1.4e-32 143.7 178 52.2
COL.COLO4_00135 Corchorus olitorius HOM05D007215 ORTHO05D009019 2.4e-32 142.9 190 50.0
PGSC0003DMG402016333 Solanum tuberosum HOM05D007215 ORTHO05D009019 4.1e-32 142.1 177 51.4
Solyc06g053440.3 Solanum lycopersicum HOM05D007215 ORTHO05D009019 7.0e-32 141.4 176 51.1
Sopen06g018520 Solanum pennellii HOM05D007215 ORTHO05D009019 7.0e-32 141.4 175 50.9
arahy.Tifrunner.gnm1.ann1.9WZ3F5 Arachis hypogaea HOM05D007215 ORTHO05D009019 1.2e-31 140.6 178 50.0
Migut.G01175 Erythranthe guttata HOM05D007215 ORTHO05D009019 2.0e-31 139.8 185 51.9
BcaC07g40499 Brassica carinata HOM05D007215 ORTHO05D009019 8.6e-30 134.4 177 50.3
C08p34680 Brassica napus HOM05D007215 ORTHO05D009019 8.6e-30 134.4 177 50.3
BolC8t51070H Brassica oleracea HOM05D007215 ORTHO05D009019 8.6e-30 134.4 177 50.3
BraA09t40633Z Brassica rapa HOM05D007215 ORTHO05D009019 8.6e-30 134.4 176 50.6
TAR633G2258 Trochodendron aralioides HOM05D007215 ORTHO05D009019 8.6e-30 134.4 149 54.4
TAR633G0862 Trochodendron aralioides HOM05D007215 ORTHO05D009019 1.5e-29 133.7 149 54.4
HPP92_023723 Vanilla planifolia HOM05D007215 ORTHO05D009019 1.5e-29 133.7 144 56.2
A09p52000 Brassica napus HOM05D007215 ORTHO05D009019 1.9e-29 133.3 177 50.3
ATR0743G235 Amborella trichopoda HOM05D007215 ORTHO05D009019 4.2e-29 132.1 132 56.8
Thecc.04G165300 Theobroma cacao HOM05D007215 ORTHO05D009019 2.1e-28 129.8 189 46.0
AL5G41750 Arabidopsis lyrata HOM05D007215 ORTHO05D009019 6.1e-28 128.3 179 47.5
Rhsim09G0009600 Rhododendron simsii HOM05D007215 ORTHO05D009019 8.0e-28 127.9 173 48.6
AT3G59680 Arabidopsis thaliana HOM05D007215 ORTHO05D009019 1.8e-27 126.7 180 47.8
Thhalv10006255m.g Eutrema salsugineum HOM05D007215 ORTHO05D009019 2.3e-27 126.3 143 56.6
SalBow6G6024 Salvia bowleyana HOM05D007215 ORTHO05D009019 2.3e-27 126.3 159 55.3
Nn7g37543 Nelumbo nucifera HOM05D007215 ORTHO05D009019 4.0e-27 125.6 146 54.8
TWI38G1882 Tripterygium wilfordii HOM05D007215 ORTHO05D009019 6.8e-27 124.8 188 46.3
Aa31LG10G13970 Aethionema arabicum HOM05D007215 ORTHO05D009019 3.4e-26 122.5 131 59.5
CDE09G0824 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 4.4e-26 122.1 144 54.2
PSO017G6467 Papaver somniferum HOM05D007215 ORTHO05D009019 4.4e-26 122.1 216 42.1
Nn1g09545 Nelumbo nucifera HOM05D007215 ORTHO05D009019 9.8e-26 120.9 145 51.0
Carub.0005s2640 Capsella rubella HOM05D007215 ORTHO05D009019 2.2e-25 119.8 170 48.8
Eucgr.L00006 Eucalyptus grandis HOM05D007215 ORTHO05D009019 2.2e-25 119.8 177 46.9
Lj4g0027849 Lotus japonicus HOM05D007215 ORTHO05D009019 2.2e-25 119.8 173 48.0
CiPaw.01G170200 Carya illinoinensis HOM05D007215 ORTHO05D009019 6.3e-25 118.2 200 45.0
MBI11_g16037_MAGBIO Magnolia biondii HOM05D007215 ORTHO05D009019 1.8e-24 116.7 149 50.3
CDE02G0746 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 9.2e-24 114.4 143 52.4
Ciclev10022275m.g Citrus clementina HOM05D007215 ORTHO05D009019 1.2e-23 114.0 191 45.5
ECA238G1604 Erigeron canadensis HOM05D007215 ORTHO05D009019 1.6e-23 113.6 176 46.6
Lsat_1_v5_gn_5_190641 Lactuca sativa HOM05D007215 ORTHO05D009019 1.0e-22 110.9 185 45.4
HanXRQChr10g0285991 Helianthus annuus HOM05D007215 ORTHO05D009019 3.8e-22 109.0 178 42.7
Migut.I00402 Erythranthe guttata HOM05D007215 ORTHO05D009019 5.0e-22 108.6 104 66.3
MD17G1178000 Malus domestica HOM05D007215 ORTHO05D009019 5.6e-21 105.1 113 56.6
Lj6P211T14 Lonicera japonica HOM05D007215 ORTHO05D009019 1.6e-20 103.6 128 48.4
HPP92_007596 Vanilla planifolia HOM05D007215 ORTHO05D009019 1.6e-20 103.6 135 51.9
CANSAT56G1068 Cannabis sativa HOM05D007215 ORTHO05D009019 2.1e-20 103.2 220 37.3
CARHR170050 Cardamine hirsuta HOM05D007215 ORTHO05D009019 2.1e-20 103.2 143 49.7
PSO837G0056 Papaver somniferum HOM05D007215 ORTHO05D009019 6.1e-20 101.7 202 40.1
Os01g0393300 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 8.9e-19 97.8 150 46.0
THA.LOC104816280 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 4.9e-17 92.0 181 39.8
MELO3C022424.2 Cucumis melo HOM05D007215 ORTHO05D009019 5.9e-15 85.1 188 39.9
CsaV3_6G007050 Cucumis sativus L. HOM05D007215 ORTHO05D009019 8.6e-14 81.3 194 39.7
Sp5g03500 Schrenkiella parvula HOM05D007215 ORTHO05D009019 1.1e-13 80.9 149 39.6
PGR042G0468 Punica granatum HOM05D007215 ORTHO05D009019 1.9e-13 80.1 196 38.8
GSVIVG01038146001 Vitis vinifera HOM05D007215 ORTHO05D009019 1.9e-13 80.1 113 47.8
Os04g0495900 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 1.2e-10 70.9 104 45.2


User provided reference genes

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