Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016121.2 Olea europaea HOM05D004037 ORTHO05D004744 2.7e-225 785.0 398 100.0
MSTRG.7308 Avicennia marina HOM05D004037 ORTHO05D004744 3.7e-134 482.3 403 64.8
Migut.M01184 Erythranthe guttata HOM05D004037 ORTHO05D004744 4.8e-134 481.9 274 84.7
Migut.M00539 Erythranthe guttata HOM05D004037 ORTHO05D004744 2.6e-132 476.1 274 83.6
Cc03_g11000 Coffea canephora HOM05D004037 ORTHO05D004744 4.5e-132 475.3 274 86.1
Nitab4.5_0000245g0260 Nicotiana tabacum HOM05D004037 ORTHO05D004744 5.5e-130 468.4 274 85.0
PGSC0003DMG400028592 Solanum tuberosum HOM05D004037 ORTHO05D004744 1.6e-129 466.8 274 83.9
Oeu050828.1 Olea europaea HOM05D004037 ORTHO05D004744 6.1e-129 464.9 306 79.1
Solyc01g098380.4 Solanum lycopersicum HOM05D004037 ORTHO05D004744 2.3e-128 463.0 274 82.8
CAN.G134.227 Capsicum annuum HOM05D004037 ORTHO05D004744 8.8e-128 461.1 274 83.9
Peaxi162Scf00071g00719 Petunia axillaris HOM05D004037 ORTHO05D004744 2.2e-126 456.4 265 84.9
EL10Ac6g13735 Beta vulgaris HOM05D004037 ORTHO05D004744 9.1e-125 451.1 280 78.2
Ah.04g165670 Amaranthus hybridus HOM05D004037 ORTHO05D004744 3.5e-124 449.1 274 79.2
Hma1.2p1_0150F.1_g066850 Hydrangea macrophylla HOM05D004037 ORTHO05D004744 4.5e-124 448.7 274 80.3
COL.COLO4_19183 Corchorus olitorius HOM05D004037 ORTHO05D004744 7.7e-124 448.0 297 74.4
Lju470A2T32 Lonicera japonica HOM05D004037 ORTHO05D004744 7.7e-124 448.0 340 68.5
CDE05G0441 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 1.0e-123 447.6 297 73.7
Duzib093G0613 Durio zibethinus HOM05D004037 ORTHO05D004744 1.0e-123 447.6 274 78.8
Ah.06g182910 Amaranthus hybridus HOM05D004037 ORTHO05D004744 1.7e-123 446.8 274 79.6
vmacro05805 Vaccinium macrocarpon HOM05D004037 ORTHO05D004744 2.2e-123 446.4 272 79.8
AUR62016240 Chenopodium quinoa HOM05D004037 ORTHO05D004744 2.9e-123 446.0 305 72.1
CDE02G2837 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 5.0e-123 445.3 272 78.7
GSVIVG01038260001 Vitis vinifera HOM05D004037 ORTHO05D004744 5.0e-123 445.3 274 79.9
HanXRQChr02g0032821 Helianthus annuus HOM05D004037 ORTHO05D004744 6.5e-123 444.9 400 59.2
PGR042G3458 Punica granatum HOM05D004037 ORTHO05D004744 8.5e-123 444.5 298 75.2
Hund02101 Selenicereus undatus HOM05D004037 ORTHO05D004744 8.5e-123 444.5 398 59.3
ClCG09G010780 Citrullus lanatus HOM05D004037 ORTHO05D004744 1.1e-122 444.1 274 78.8
Nn3g17600 Nelumbo nucifera HOM05D004037 ORTHO05D004744 1.5e-122 443.7 274 78.8
TAR636G3090 Trochodendron aralioides HOM05D004037 ORTHO05D004744 1.9e-122 443.4 274 79.6
Actinidia39245 Actinidia chinensis HOM05D004037 ORTHO05D004744 2.5e-122 443.0 288 74.7
Sed0007542 Sechium edule HOM05D004037 ORTHO05D004744 2.5e-122 443.0 274 77.7
Thecc.05G172500 Theobroma cacao HOM05D004037 ORTHO05D004744 2.5e-122 443.0 274 79.2
MBI18_g24142_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 3.2e-122 442.6 272 80.1
Hund23277 Selenicereus undatus HOM05D004037 ORTHO05D004744 4.2e-122 442.2 274 77.7
Sc06g0007930 Simmondsia chinensis HOM05D004037 ORTHO05D004744 4.2e-122 442.2 274 78.1
Thecc.01G117800 Theobroma cacao HOM05D004037 ORTHO05D004744 5.5e-122 441.8 274 79.2
ECA246G0926 Erigeron canadensis HOM05D004037 ORTHO05D004744 7.2e-122 441.4 274 78.1
AUR62032781 Chenopodium quinoa HOM05D004037 ORTHO05D004744 9.4e-122 441.0 303 71.9
EL10Ac2g02395 Beta vulgaris HOM05D004037 ORTHO05D004744 1.2e-121 440.7 399 59.6
PSO541G3258 Papaver somniferum HOM05D004037 ORTHO05D004744 1.2e-121 440.7 299 72.9
Aqoxy2G03110 Aquilegia oxysepala HOM05D004037 ORTHO05D004744 2.1e-121 439.9 274 78.1
CANSAT01G0494 Cannabis sativa HOM05D004037 ORTHO05D004744 2.1e-121 439.9 274 79.9
SalBow8G4021 Salvia bowleyana HOM05D004037 ORTHO05D004744 2.1e-121 439.9 259 84.2
TWI63G1426 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 2.7e-121 439.5 274 78.5
PSO675G6334 Papaver somniferum HOM05D004037 ORTHO05D004744 3.6e-121 439.1 301 72.1
CiPaw.01G202600 Carya illinoinensis HOM05D004037 ORTHO05D004744 6.1e-121 438.3 272 77.2
MELO3C013171.2 Cucumis melo HOM05D004037 ORTHO05D004744 6.1e-121 438.3 274 77.7
QL10p064641 Quercus lobata HOM05D004037 ORTHO05D004744 8.0e-121 438.0 273 78.4
TWI34G0723 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 8.0e-121 438.0 274 78.1
Gorai.001G202100 Gossypium raimondii HOM05D004037 ORTHO05D004744 1.0e-120 437.6 274 78.8
RcHm_v2.0_Chr2g0084421 Rosa chinensis HOM05D004037 ORTHO05D004744 1.0e-120 437.6 274 78.1
QL10p065764 Quercus lobata HOM05D004037 ORTHO05D004744 1.8e-120 436.8 273 78.0
Atru.chr12.1746 Acer truncatum HOM05D004037 ORTHO05D004744 2.3e-120 436.4 274 78.8
CsaV3_7G021780 Cucumis sativus L. HOM05D004037 ORTHO05D004744 2.3e-120 436.4 274 77.4
Manes.05G207900 Manihot esculenta HOM05D004037 ORTHO05D004744 3.0e-120 436.0 274 77.4
Gohir.D07G181200 Gossypium hirsutum HOM05D004037 ORTHO05D004744 4.0e-120 435.6 274 78.5
Glyma.07G060300 Glycine max HOM05D004037 ORTHO05D004744 6.8e-120 434.9 376 60.6
Gorai.007G347100 Gossypium raimondii HOM05D004037 ORTHO05D004744 6.8e-120 434.9 274 78.1
SGA_v2.0_scaffold22G09788 Striga asiatica HOM05D004037 ORTHO05D004744 8.8e-120 434.5 402 59.7
Ciclev10020914m.g Citrus clementina HOM05D004037 ORTHO05D004744 1.2e-119 434.1 274 77.4
DCAR_002599 Daucus carota HOM05D004037 ORTHO05D004744 1.2e-119 434.1 288 74.3
Lsat_1_v5_gn_3_17660 Lactuca sativa HOM05D004037 ORTHO05D004744 1.2e-119 434.1 274 75.5
Sed0020358 Sechium edule HOM05D004037 ORTHO05D004744 1.5e-119 433.7 274 77.7
Duzib128G0968 Durio zibethinus HOM05D004037 ORTHO05D004744 2.0e-119 433.3 293 73.7
FvH4_2g00280 Fragaria vesca HOM05D004037 ORTHO05D004744 2.6e-119 433.0 274 77.4
Gohir.A07G173900 Gossypium hirsutum HOM05D004037 ORTHO05D004744 2.6e-119 433.0 274 77.7
Gohir.A11G301700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 2.6e-119 433.0 286 75.2
Actinidia14627 Actinidia chinensis HOM05D004037 ORTHO05D004744 3.4e-119 432.6 308 69.5
THA.LOC104804380 Tarenaya hassleriana HOM05D004037 ORTHO05D004744 4.4e-119 432.2 274 76.3
FAN24G1991 Fragaria x ananassa HOM05D004037 ORTHO05D004744 9.8e-119 431.0 272 77.6
Thhalv10006083m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 1.3e-118 430.6 274 76.6
FAN19G0379 Fragaria x ananassa HOM05D004037 ORTHO05D004744 1.7e-118 430.3 285 74.7
MD15G1142500 Malus domestica HOM05D004037 ORTHO05D004744 1.7e-118 430.3 274 74.8
Prupe.6G152500 Prunus persica HOM05D004037 ORTHO05D004744 1.7e-118 430.3 274 76.3
AT3G59890 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 2.8e-118 429.5 274 76.3
Phvul.001G003100 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 2.8e-118 429.5 274 75.5
HPP92_022643 Vanilla planifolia HOM05D004037 ORTHO05D004744 2.8e-118 429.5 286 73.1
AL5G42050 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 3.7e-118 429.1 274 76.3
Lalb_Chr10g0100171 Lupinus albus HOM05D004037 ORTHO05D004744 3.7e-118 429.1 272 76.8
Glyma.16G028900 Glycine max HOM05D004037 ORTHO05D004744 4.8e-118 428.7 274 75.2
CARHR170220 Cardamine hirsuta HOM05D004037 ORTHO05D004744 6.3e-118 428.3 274 75.9
VMungo1383G1316 Vigna mungo HOM05D004037 ORTHO05D004744 6.3e-118 428.3 274 75.9
Sp4g26120 Schrenkiella parvula HOM05D004037 ORTHO05D004744 8.3e-118 427.9 274 75.5
Carub.0005s2663 Capsella rubella HOM05D004037 ORTHO05D004744 1.1e-117 427.6 274 75.9
Prupe.7G270700 Prunus persica HOM05D004037 ORTHO05D004744 1.1e-117 427.6 274 76.6
RcHm_v2.0_Chr2g0126841 Rosa chinensis HOM05D004037 ORTHO05D004744 1.1e-117 427.6 274 75.9
unitig_37.g12156 Utricularia gibba HOM05D004037 ORTHO05D004744 1.4e-117 427.2 252 82.1
ATR0743G110 Amborella trichopoda HOM05D004037 ORTHO05D004744 1.8e-117 426.8 272 76.5
Aa31LG10G14130 Aethionema arabicum HOM05D004037 ORTHO05D004744 2.4e-117 426.4 274 75.2
BraA04t18775Z Brassica rapa HOM05D004037 ORTHO05D004744 2.4e-117 426.4 285 72.6
BolC4t28586H Brassica oleracea HOM05D004037 ORTHO05D004744 7.0e-117 424.9 285 71.9
arahy.Tifrunner.gnm1.ann1.X3ZCQR Arachis hypogaea HOM05D004037 ORTHO05D004744 9.1e-117 424.5 274 74.8
AL4G42910 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 1.2e-116 424.1 274 74.8
AT2G44040 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 1.2e-116 424.1 274 74.8
arahy.Tifrunner.gnm1.ann1.FPGW6Q Arachis hypogaea HOM05D004037 ORTHO05D004744 1.2e-116 424.1 274 74.8
Gohir.D11G316700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.2e-116 424.1 269 77.3
TPR.G5068 Trifolium pratense HOM05D004037 ORTHO05D004744 1.2e-116 424.1 274 75.5
C03p29380 Brassica napus HOM05D004037 ORTHO05D004744 2.0e-116 423.3 274 74.8
BolC3t15285H Brassica oleracea HOM05D004037 ORTHO05D004744 2.0e-116 423.3 274 74.8
Thhalv10001534m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 2.0e-116 423.3 285 72.3
Ca_23565_v3 Cicer arietinum L. HOM05D004037 ORTHO05D004744 2.7e-116 422.9 274 74.8
C04p70860 Brassica napus HOM05D004037 ORTHO05D004744 3.5e-116 422.5 285 71.6
Aa31LG1G25710 Aethionema arabicum HOM05D004037 ORTHO05D004744 4.5e-116 422.2 274 74.8
BcaC01g05190 Brassica carinata HOM05D004037 ORTHO05D004744 4.5e-116 422.2 274 74.5
A03p24640 Brassica napus HOM05D004037 ORTHO05D004744 4.5e-116 422.2 274 74.8
BraA03t11670Z Brassica rapa HOM05D004037 ORTHO05D004744 4.5e-116 422.2 274 74.8
CSS0028639 Camellia sinensis var. sinensis HOM05D004037 ORTHO05D004744 5.9e-116 421.8 272 74.3
BcaB01g03335 Brassica carinata HOM05D004037 ORTHO05D004744 7.7e-116 421.4 291 70.8
Carub.0004s2659 Capsella rubella HOM05D004037 ORTHO05D004744 1.3e-115 420.6 274 73.7
Medtr8g028145 Medicago truncatula HOM05D004037 ORTHO05D004744 1.3e-115 420.6 274 75.2
PSO339G4618 Papaver somniferum HOM05D004037 ORTHO05D004744 1.3e-115 420.6 274 74.5
Phvul.010G108900 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 1.3e-115 420.6 274 75.2
A04p33160 Brassica napus HOM05D004037 ORTHO05D004744 2.3e-115 419.9 274 74.1
Gohir.D11G317300 Gossypium hirsutum HOM05D004037 ORTHO05D004744 6.6e-115 418.3 264 77.7
Psat4g089800 Pisum sativum HOM05D004037 ORTHO05D004744 6.6e-115 418.3 274 74.8
CARHR139200 Cardamine hirsuta HOM05D004037 ORTHO05D004744 1.5e-114 417.2 274 74.1
Lj3g0014190 Lotus japonicus HOM05D004037 ORTHO05D004744 7.2e-114 414.8 274 73.7
AUR62032340 Chenopodium quinoa HOM05D004037 ORTHO05D004744 2.8e-113 412.9 282 72.3
Zm00001eb176170 Zea mays HOM05D004037 ORTHO05D004744 3.6e-113 412.5 286 70.6
BcaB06g29352 Brassica carinata HOM05D004037 ORTHO05D004744 4.7e-113 412.1 269 74.0
PSO384G4791 Papaver somniferum HOM05D004037 ORTHO05D004744 1.0e-112 411.0 274 73.0
Haze_11114 Corylus avellana HOM05D004037 ORTHO05D004744 1.8e-112 410.2 269 74.7
Potri.017G001900 Populus trichocarpa HOM05D004037 ORTHO05D004744 4.0e-112 409.1 274 73.7
Os02g0436400 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 6.8e-112 408.3 286 71.7
Cpa.g.sc182.24 Carica papaya HOM05D004037 ORTHO05D004744 2.0e-111 406.8 261 76.2
AUR62028616 Chenopodium quinoa HOM05D004037 ORTHO05D004744 2.6e-111 406.4 256 77.3
Os03g0245100 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 1.7e-110 403.7 272 70.6
Lj6C283G4 Lonicera japonica HOM05D004037 ORTHO05D004744 2.2e-110 403.3 277 73.6
HanXRQChr05g0133541 Helianthus annuus HOM05D004037 ORTHO05D004744 7.0e-109 398.3 261 74.7
BcaC02g07140 Brassica carinata HOM05D004037 ORTHO05D004744 9.5e-106 387.9 274 69.3
Potri.007G145900 Populus trichocarpa HOM05D004037 ORTHO05D004744 9.5e-106 387.9 271 69.7
SEGI_29918 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 2.3e-104 383.3 292 64.7
Sabra17G0005900 Salix brachista HOM05D004037 ORTHO05D004744 2.2e-102 376.7 310 62.9
Sopen01g041950 Solanum pennellii HOM05D004037 ORTHO05D004744 1.9e-101 373.6 222 82.0
SMO347G0499 Selaginella moellendorffii HOM05D004037 ORTHO05D004744 4.1e-101 372.5 284 63.0
Cfa008527 Carpinus fangiana HOM05D004037 ORTHO05D004744 1.6e-100 370.5 269 68.0
BcaB06g29511 Brassica carinata HOM05D004037 ORTHO05D004744 6.6e-99 365.2 268 67.5
Nn048s41912 Nelumbo nucifera HOM05D004037 ORTHO05D004744 5.6e-98 362.1 238 75.2
Pp3c15_7380 Physcomitrium patens HOM05D004037 ORTHO05D004744 1.2e-95 354.4 278 62.6
Peaxi162Scf00434g00730 Petunia axillaris HOM05D004037 ORTHO05D004744 2.3e-91 340.1 186 89.8
CBR_g41668 Chara braunii HOM05D004037 ORTHO05D004744 1.5e-90 337.4 274 59.1
Mapoly0033s0134 Marchantia polymorpha HOM05D004037 ORTHO05D004744 9.6e-82 308.1 284 56.7
Nitab4.5_0001165g0010 Nicotiana tabacum HOM05D004037 ORTHO05D004744 4.7e-81 305.8 185 83.2
Dinv24475 Davidia involucrata HOM05D004037 ORTHO05D004744 2.2e-78 297.0 214 71.0
Cre14.g627850 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 8.4e-78 295.0 274 53.6
MCO16G413 Micromonas commoda HOM05D004037 ORTHO05D004744 6.0e-76 288.9 288 55.6
PRCOL_00006631 Prasinoderma coloniale HOM05D004037 ORTHO05D004744 8.7e-75 285.0 276 49.3
FAN20G0369 Fragaria x ananassa HOM05D004037 ORTHO05D004744 4.3e-74 282.7 310 51.6
Peaxi162Scf00434g00733 Petunia axillaris HOM05D004037 ORTHO05D004744 7.1e-69 265.4 218 66.5
Peaxi162Scf00434g00740 Petunia axillaris HOM05D004037 ORTHO05D004744 7.9e-68 261.9 174 79.3
Gohir.D09G124433 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.2e-63 248.1 239 59.4
Actinidia11426 Actinidia chinensis HOM05D004037 ORTHO05D004744 1.8e-56 224.2 159 69.2
Gorai.006G143300 Gossypium raimondii HOM05D004037 ORTHO05D004744 2.4e-56 223.8 220 58.6
Nn048s41913 Nelumbo nucifera HOM05D004037 ORTHO05D004744 2.2e-54 217.2 175 64.6
Zm00001eb398800 Zea mays HOM05D004037 ORTHO05D004744 5.7e-50 202.6 153 63.4
Lsat_1_v5_gn_9_123180 Lactuca sativa HOM05D002510 ORTHO05D007210 7.6e-47 192.2 175 57.1
BcaB01g03344 Brassica carinata HOM05D004037 ORTHO05D004744 1.4e-45 188.0 268 44.4
AagrBONN_evm.TU.Sc2ySwM_368.1842 Anthoceros agrestis HOM05D004037 ORTHO05D004744 6.1e-44 182.6 187 52.4
AagrBONN_evm.TU.Sc2ySwM_368.1728 Anthoceros agrestis HOM05D004037 ORTHO05D004744 3.2e-37 160.2 138 60.9
FvH4_2g00640 Fragaria vesca HOM05D004037 ORTHO05D004744 3.6e-36 156.8 90 83.3
PSO451G0001 Papaver somniferum HOM05D004037 ORTHO05D004744 4.1e-32 143.3 77 87.0
Cre16.g656300 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 1.0e-30 138.7 279 31.9
MBI01_g38182_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 2.2e-25 120.9 75 78.7
Peaxi162Scf00609g00310 Petunia axillaris HOM05D004037 ORTHO05D019316 7.0e-24 115.9 67 85.1
RhsimUnG0159300 Rhododendron simsii HOM05D004037 ORTHO05D004744 1.6e-23 114.8 152 47.4
AagrBONN_evm.TU.Sc2ySwM_152.2 Anthoceros agrestis HOM05D004037 ORTHO05D004744 5.9e-23 112.8 108 56.5
ATR0716G071 Amborella trichopoda HOM05D004037 ORTHO05D004744 1.2e-20 105.1 66 86.4
MD02G1000400 Malus domestica HOM05D004037 ORTHO05D004744 2.7e-20 104.0 89 57.3
AagrBONN_evm.TU.Sc2ySwM_344.5552 Anthoceros agrestis HOM05D004037 ORTHO05D004744 3.7e-17 93.6 84 54.8
SEGI_36179 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 8.5e-14 82.4 179 33.0
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 9.8e-10 68.9 81 49.4
CAN.G1019.1 Capsicum annuum HOM05D004037 ORTHO05D004744 2.4e-08 64.3 59 55.9


User provided reference genes

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