Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 2.3e-96 355.5 173 100.0
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 5.6e-71 271.2 164 78.0
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 7.3e-71 270.8 166 77.1
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 3.6e-70 268.5 167 76.0
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 1.4e-69 266.5 170 74.7
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 3.1e-69 265.4 167 75.4
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 3.1e-69 265.4 164 75.6
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 4.0e-69 265.0 166 75.9
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 9.0e-69 263.8 163 76.7
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 9.0e-69 263.8 166 75.3
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 1.2e-68 263.5 164 75.6
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 1.5e-68 263.1 166 77.1
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 3.4e-68 261.9 166 74.7
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.4e-68 261.9 166 74.7
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 7.6e-68 260.8 164 74.4
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 2.2e-67 259.2 171 73.1
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 2.9e-67 258.8 163 74.8
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 4.9e-67 258.1 166 74.7
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 6.4e-67 257.7 169 73.4
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 6.4e-67 257.7 165 73.3
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 6.4e-67 257.7 164 74.4
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 8.4e-67 257.3 164 74.4
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 8.4e-67 257.3 165 73.9
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 1.1e-66 256.9 166 74.1
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 1.4e-66 256.5 169 71.0
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 1.4e-66 256.5 170 70.6
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 1.4e-66 256.5 169 71.6
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 2.4e-66 255.8 167 72.5
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 3.2e-66 255.4 161 73.9
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 4.2e-66 255.0 163 73.6
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 4.2e-66 255.0 164 73.2
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 5.4e-66 254.6 167 70.7
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 7.1e-66 254.2 164 73.8
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 1.2e-65 253.4 166 72.3
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.2e-65 253.4 170 71.2
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 2.1e-65 252.7 163 74.2
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 2.7e-65 252.3 169 69.2
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 2.7e-65 252.3 166 71.7
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 2.7e-65 252.3 163 71.2
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 3.5e-65 251.9 164 72.6
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 1.0e-64 250.4 166 72.3
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.8e-64 249.6 166 71.1
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 1.8e-64 249.6 164 72.0
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 2.3e-64 249.2 167 71.3
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 2.3e-64 249.2 163 72.4
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 3.0e-64 248.8 166 70.5
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 3.9e-64 248.4 164 70.7
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 5.1e-64 248.1 164 73.2
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 5.1e-64 248.1 164 73.2
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 5.1e-64 248.1 166 72.3
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 5.1e-64 248.1 167 69.5
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 6.7e-64 247.7 164 70.1
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 6.7e-64 247.7 164 68.9
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 8.7e-64 247.3 169 69.2
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 1.5e-63 246.5 161 70.2
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 1.5e-63 246.5 164 69.5
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.5e-63 246.5 164 69.5
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 1.5e-63 246.5 164 71.3
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 1.5e-63 246.5 168 68.5
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.9e-63 246.1 166 71.7
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 2.5e-63 245.7 164 70.7
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 2.5e-63 245.7 164 70.1
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 3.3e-63 245.4 164 70.1
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 3.3e-63 245.4 164 70.1
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 3.3e-63 245.4 164 70.1
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 4.3e-63 245.0 166 70.5
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 4.3e-63 245.0 164 69.5
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 5.6e-63 244.6 164 68.9
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 7.4e-63 244.2 164 68.3
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 7.4e-63 244.2 164 70.7
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 1.3e-62 243.4 165 70.3
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 1.6e-62 243.0 164 70.1
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 2.1e-62 242.7 164 69.5
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 2.1e-62 242.7 173 67.6
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 2.1e-62 242.7 167 71.3
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 2.8e-62 242.3 164 69.5
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 3.7e-62 241.9 164 70.1
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 3.7e-62 241.9 164 70.1
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 6.2e-62 241.1 164 69.5
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 1.8e-61 239.6 164 68.9
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 2.4e-61 239.2 164 68.9
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 5.3e-61 238.0 161 70.2
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 1.2e-60 236.9 166 68.7
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 4.5e-60 235.0 163 67.5
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 7.6e-60 234.2 163 66.9
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 7.6e-60 234.2 166 67.5
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 4.9e-59 231.5 163 66.9
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 6.5e-59 231.1 164 65.9
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 8.4e-59 230.7 164 70.7
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 1.1e-58 230.3 164 66.5
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 1.1e-58 230.3 165 67.9
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 1.4e-58 229.9 158 67.7
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 2.5e-58 229.2 164 67.7
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 4.2e-58 228.4 160 66.9
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 9.3e-58 227.3 164 65.9
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 9.3e-58 227.3 164 65.9
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 2.1e-57 226.1 170 64.1
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 1.9e-55 219.5 171 64.9
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 5.7e-55 218.0 187 57.8
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 2.8e-54 215.7 164 64.0
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 3.7e-54 215.3 163 66.3
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 6.2e-54 214.5 171 64.3
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 2.2e-51 206.1 163 61.3
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 4.2e-50 201.8 167 62.3
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 1.6e-49 199.9 164 61.0
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 2.1e-49 199.5 164 61.0
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 4.6e-49 198.4 163 59.5
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 3.0e-48 195.7 161 61.5
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 1.1e-47 193.7 133 68.4
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 2.5e-47 192.6 168 57.7
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.6e-46 189.9 164 58.5
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 4.8e-46 188.3 182 53.8
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 5.3e-45 184.9 162 55.6
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 5.5e-42 174.9 163 51.5
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 4.3e-39 165.2 164 51.8
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 4.8e-38 161.8 104 78.8
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.7e-35 153.3 108 72.2
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 2.4e-29 132.9 176 42.6
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 3.5e-28 129.0 91 67.0
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 3.8e-27 125.6 113 51.3
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 4.7e-25 118.6 80 65.0
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 2.3e-24 116.3 93 61.3
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 4.8e-22 108.6 74 71.6
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 1.8e-21 106.7 89 65.2
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 5.9e-20 101.7 76 64.5
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 5.9e-20 101.7 74 66.2
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 6.5e-19 98.2 80 56.2
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 8.5e-19 97.8 62 74.2
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 1.6e-17 93.6 74 59.5
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 1.8e-13 80.1 70 57.1
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 2.0e-12 76.6 74 56.8
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 3.5e-12 75.9 74 51.4
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 7.7e-12 74.7 57 64.9
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.8e-11 72.4 56 60.7
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 8.5e-11 71.2 121 34.7
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 1.6e-09 67.0 75 48.0
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 2.7e-09 66.2 39 66.7
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 8.0e-09 64.7 109 31.2


User provided reference genes

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