Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013936.1 Olea europaea HOM05D000731 ORTHO05D007540 8.0e-76 287.0 139 100.0
Oeu053519.2 Olea europaea HOM05D000731 ORTHO05D007540 7.0e-64 247.3 127 93.7
Nitab4.5_0000704g0100 Nicotiana tabacum HOM05D000731 ORTHO05D007540 1.5e-29 133.3 136 58.1
Nitab4.5_0003587g0050 Nicotiana tabacum HOM05D000731 ORTHO05D007540 1.2e-28 130.2 136 57.4
MSTRG.26330 Avicennia marina HOM05D000731 ORTHO05D007540 1.6e-28 129.8 128 54.7
CAN.G467.10 Capsicum annuum HOM05D000731 ORTHO05D007540 1.1e-27 127.1 133 54.1
Migut.K00401 Erythranthe guttata HOM05D000731 ORTHO05D007540 1.8e-27 126.3 122 50.8
Sopen07g003560 Solanum pennellii HOM05D000731 ORTHO05D007540 3.1e-27 125.6 137 51.1
Solyc07g007560.3 Solanum lycopersicum HOM05D000731 ORTHO05D007540 5.2e-27 124.8 137 52.6
PGSC0003DMG400030684 Solanum tuberosum HOM05D000731 ORTHO05D007540 1.5e-26 123.2 137 51.8
SalBow1G2698 Salvia bowleyana HOM05D000731 ORTHO05D007540 4.6e-23 111.7 126 51.6
vmacro06165 Vaccinium macrocarpon HOM05D000731 ORTHO05D007540 3.0e-22 109.0 130 47.7
Rhsim03G0252700 Rhododendron simsii HOM05D000731 ORTHO05D007540 1.1e-21 107.1 130 48.5
vmacro22984 Vaccinium macrocarpon HOM05D000731 ORTHO05D007540 4.3e-21 105.1 128 46.9
COL.COLO4_33376 Corchorus olitorius HOM05D000731 ORTHO05D007540 5.6e-21 104.8 139 48.2
Potri.018G121600 Populus trichocarpa HOM05D000731 ORTHO05D007540 9.6e-21 104.0 140 49.3
Actinidia26362 Actinidia chinensis HOM05D000731 ORTHO05D007540 1.6e-20 103.2 128 43.8
Sabra06G0044900 Salix brachista HOM05D000731 ORTHO05D007540 2.8e-20 102.4 140 48.6
Manes.06G044700 Manihot esculenta HOM05D000731 ORTHO05D007540 1.8e-19 99.8 130 47.7
Gorai.009G014300 Gossypium raimondii HOM05D000731 ORTHO05D007540 3.1e-19 99.0 139 46.0
Gohir.A05G013200 Gossypium hirsutum HOM05D000731 ORTHO05D007540 6.8e-19 97.8 139 46.0
Cc06_g07720 Coffea canephora HOM05D000731 ORTHO05D007540 8.9e-19 97.4 135 45.2
Gohir.D05G014300 Gossypium hirsutum HOM05D000731 ORTHO05D007540 8.9e-19 97.4 139 45.3
Haze_25454 Corylus avellana HOM05D000731 ORTHO05D007540 1.5e-18 96.7 134 44.8
Prupe.7G251900 Prunus persica HOM05D000731 ORTHO05D007540 1.5e-18 96.7 132 47.7
GSVIVG01012848001 Vitis vinifera HOM05D000731 ORTHO05D007540 1.5e-18 96.7 130 46.2
Peaxi162Scf00088g00819 Petunia axillaris HOM05D000731 ORTHO05D007540 2.0e-18 96.3 128 49.2
SGA_v2.0_scaffold183G39903 Striga asiatica HOM05D000731 ORTHO05D007540 2.0e-18 96.3 129 44.2
Potri.006G062300 Populus trichocarpa HOM05D000731 ORTHO05D007540 3.4e-18 95.5 138 46.4
Lsat_1_v5_gn_5_93040 Lactuca sativa HOM05D000731 ORTHO05D007540 5.8e-18 94.7 131 46.6
QL02p090592 Quercus lobata HOM05D000731 ORTHO05D007540 9.9e-18 94.0 138 47.1
FvH4_1g02110 Fragaria vesca HOM05D000731 ORTHO05D007540 1.3e-17 93.6 133 48.1
CSS0049656 Camellia sinensis var. sinensis HOM05D000731 ORTHO05D007540 1.7e-17 93.2 143 42.0
Eucgr.C00489 Eucalyptus grandis HOM05D000731 ORTHO05D007540 1.7e-17 93.2 139 43.2
Cfa002272 Carpinus fangiana HOM05D000731 ORTHO05D007540 6.4e-17 91.3 134 44.0
CiPaw.04G177100 Carya illinoinensis HOM05D000731 ORTHO05D007540 6.4e-17 91.3 131 45.8
MD02G1019200 Malus domestica HOM05D000731 ORTHO05D007540 6.4e-17 91.3 136 44.1
FAN28G1430 Fragaria x ananassa HOM05D000731 ORTHO05D007540 8.4e-17 90.9 133 47.4
FAN26G1130 Fragaria x ananassa HOM05D000731 ORTHO05D007540 1.1e-16 90.5 133 47.4
Dinv36452 Davidia involucrata HOM05D000731 ORTHO05D007540 1.4e-16 90.1 89 62.9
Lj9A703G35 Lonicera japonica HOM05D000731 ORTHO05D007540 1.9e-16 89.7 75 60.0
RcHm_v2.0_Chr2g0087161 Rosa chinensis HOM05D000731 ORTHO05D007540 1.9e-16 89.7 136 44.1
CANSAT11G1077 Cannabis sativa HOM05D000731 ORTHO05D007540 1.2e-15 87.0 109 49.5
TWI34G0845 Tripterygium wilfordii HOM05D000731 ORTHO05D007540 1.2e-15 87.0 86 59.3
FAN23G0834 Fragaria x ananassa HOM05D000731 ORTHO05D007540 1.6e-15 86.7 133 46.6
Ciclev10007933m.g Citrus clementina HOM05D000731 ORTHO05D007540 2.7e-15 85.9 136 43.4
PGR142G1011 Punica granatum HOM05D000731 ORTHO05D007540 6.0e-15 84.7 133 41.4
TAR625G1481 Trochodendron aralioides HOM05D000731 ORTHO05D007540 6.0e-15 84.7 137 43.8
DCAR_020894 Daucus carota HOM05D000731 ORTHO05D007540 3.0e-14 82.4 131 38.9
MD15G1162900 Malus domestica HOM05D000731 ORTHO05D007540 3.9e-14 82.0 137 40.9
Nn8g39624 Nelumbo nucifera HOM05D000731 ORTHO05D007540 3.9e-14 82.0 137 44.5
Sed0027250 Sechium edule HOM05D000731 ORTHO05D007540 3.9e-14 82.0 132 40.9
ClCG11G003440 Citrullus lanatus HOM05D000731 ORTHO05D007540 5.1e-14 81.6 139 42.4
AUR62013262 Chenopodium quinoa HOM05D000731 ORTHO05D007540 2.5e-13 79.3 87 49.4
Glyma.13G162900 Glycine max HOM05D000731 ORTHO05D007540 4.3e-13 78.6 135 37.8
Glyma.17G108300 Glycine max HOM05D000731 ORTHO05D007540 7.3e-13 77.8 135 40.0
Hund09304 Selenicereus undatus HOM05D000731 ORTHO05D007540 7.3e-13 77.8 140 37.9
AT5G20380 Arabidopsis thaliana HOM05D000731 ORTHO05D007540 9.6e-13 77.4 129 42.6
AL6G31940 Arabidopsis lyrata HOM05D000731 ORTHO05D007540 1.3e-12 77.0 129 41.9
Cpa.g.sc277.4 Carica papaya HOM05D000731 ORTHO05D007540 1.3e-12 77.0 136 40.4
VMungo1215G3343 Vigna mungo HOM05D000731 ORTHO05D007540 1.6e-12 76.6 131 43.5
EL10Ac8g18764 Beta vulgaris HOM05D000731 ORTHO05D007540 2.8e-12 75.9 88 45.5
BcaB01g04789 Brassica carinata HOM05D000731 ORTHO05D007540 3.6e-12 75.5 130 36.9
BcaB05g22849 Brassica carinata HOM05D000731 ORTHO05D007540 3.6e-12 75.5 130 36.9
TPR.G7977 Trifolium pratense HOM05D000731 ORTHO05D007540 3.6e-12 75.5 138 40.6
Ah.14g079080 Amaranthus hybridus HOM05D000731 ORTHO05D007540 6.2e-12 74.7 141 38.3
CsaV3_2G003310 Cucumis sativus L. HOM05D000731 ORTHO05D007540 6.2e-12 74.7 87 51.7
SGA_v2.0_scaffold63G21786 Striga asiatica HOM05D003846 ORTHO05D004726 6.2e-12 74.7 105 44.8
Thhalv10013250m.g Eutrema salsugineum HOM05D000731 ORTHO05D007540 1.1e-11 73.9 133 36.8
Lalb_Chr07g0179361 Lupinus albus HOM05D000731 ORTHO05D007540 1.1e-11 73.9 127 38.6
HanXRQChr12g0357151 Helianthus annuus HOM05D000731 ORTHO05D007540 1.8e-11 73.2 120 38.3
CARHR192460 Cardamine hirsuta HOM05D000731 ORTHO05D007540 2.4e-11 72.8 128 38.3
unitig_899.g15011 Utricularia gibba HOM05D000731 ORTHO05D007540 2.4e-11 72.8 121 36.4
arahy.Tifrunner.gnm1.ann1.65V40T Arachis hypogaea HOM05D000731 ORTHO05D007540 3.1e-11 72.4 132 33.3
MELO3C004476.2 Cucumis melo HOM05D000731 ORTHO05D007540 4.0e-11 72.0 87 49.4
Sp6g24040 Schrenkiella parvula HOM05D000731 ORTHO05D007540 5.3e-11 71.6 128 36.7
arahy.Tifrunner.gnm1.ann1.9TXC7I Arachis hypogaea HOM05D000731 ORTHO05D007540 6.9e-11 71.2 66 51.5
Aqoxy3G00606 Aquilegia oxysepala HOM05D000731 ORTHO05D007540 2.0e-10 69.7 122 39.3
Lj4g0021646 Lotus japonicus HOM05D000731 ORTHO05D007540 2.6e-10 69.3 128 36.7
Phvul.003G171700 Phaseolus vulgaris HOM05D000731 ORTHO05D007540 2.6e-10 69.3 104 42.3
Psat4g035120 Pisum sativum HOM05D000731 ORTHO05D007540 4.4e-10 68.6 132 36.4
BolC2t07039H Brassica oleracea HOM05D000731 ORTHO05D007540 5.8e-10 68.2 131 35.9
A02p06220 Brassica napus HOM05D000731 ORTHO05D007540 7.6e-10 67.8 128 39.1
BNapus_Darmor_BZH_scaffold_38p01620 Brassica napus HOM05D000731 ORTHO05D007540 7.6e-10 67.8 128 39.1
BraA02t05571Z Brassica rapa HOM05D000731 ORTHO05D007540 7.6e-10 67.8 128 39.1
HPP92_021997 Vanilla planifolia HOM05D000731 ORTHO05D007540 7.6e-10 67.8 53 62.3
Aa31LG1G14310 Aethionema arabicum HOM05D000731 ORTHO05D007540 1.3e-09 67.0 43 69.8
ATR0767G237 Amborella trichopoda HOM05D000731 ORTHO05D007540 2.9e-09 65.9 33 84.8
Carub.0006s1877 Capsella rubella HOM05D000731 ORTHO05D007540 2.9e-09 65.9 88 45.5
ECA234G1709 Erigeron canadensis HOM05D000731 ORTHO05D007540 2.9e-09 65.9 29 89.7
Ca_21641_v3 Cicer arietinum L. HOM05D000731 ORTHO05D007540 3.8e-09 65.5 134 36.6
MBI14_g31958_MAGBIO Magnolia biondii HOM05D000731 ORTHO05D007540 3.8e-09 65.5 88 45.5
PSO170G6862 Papaver somniferum HOM05D000731 ORTHO05D007540 6.4e-09 64.7 39 71.8
BcaC03g13761 Brassica carinata HOM05D000731 ORTHO05D007540 8.4e-09 64.3 131 35.1
Medtr4g116030 Medicago truncatula HOM05D000731 ORTHO05D007540 8.4e-09 64.3 140 35.7
PSO017G0326 Papaver somniferum HOM05D000731 ORTHO05D007540 8.4e-09 64.3 140 32.9
THA.LOC104815095 Tarenaya hassleriana HOM05D000731 ORTHO05D007540 4.6e-07 58.5 85 42.4
Zm00001eb320540 Zea mays HOM05D000731 ORTHO05D007540 1.0e-06 57.4 29 79.3


User provided reference genes

Program Settings