Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013122.1 Olea europaea HOM05D004421 ORTHO05D005227 7.9e-55 216.9 109 100.0
Oeu054302.1 Olea europaea HOM05D004421 ORTHO05D005227 2.2e-52 208.8 109 95.4
SalBow3G0779 Salvia bowleyana HOM05D004421 ORTHO05D005227 4.2e-48 194.5 109 88.1
TWI36G1565 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 4.7e-47 191.0 107 89.7
unitig_748.g8294 Utricularia gibba HOM05D004421 ORTHO05D005227 1.4e-46 189.5 99 91.9
MSTRG.12990 Avicennia marina HOM05D004421 ORTHO05D005227 2.3e-46 188.7 108 86.1
MSTRG.14457 Avicennia marina HOM05D004421 ORTHO05D005227 3.0e-46 188.3 109 85.3
TWI79G1637 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 3.9e-46 188.0 107 88.8
Hma1.2p1_0445F.1_g154450 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 5.2e-46 187.6 107 86.0
unitig_32.g10858 Utricularia gibba HOM05D004421 ORTHO05D005227 5.2e-46 187.6 99 91.9
Cfa014325 Carpinus fangiana HOM05D004421 ORTHO05D005227 8.8e-46 186.8 107 86.0
Sed0012667 Sechium edule HOM05D004421 ORTHO05D005227 8.8e-46 186.8 106 86.8
SGA_v2.0_scaffold392G50685 Striga asiatica HOM05D004421 ORTHO05D005227 8.8e-46 186.8 109 82.6
FAN02G1632 Fragaria x ananassa HOM05D004421 ORTHO05D005227 1.1e-45 186.4 109 85.3
QL10p065434 Quercus lobata HOM05D004421 ORTHO05D005227 1.1e-45 186.4 107 84.1
FvH4_6g42460 Fragaria vesca HOM05D004421 ORTHO05D005227 1.5e-45 186.0 109 85.3
FAN05G5559 Fragaria x ananassa HOM05D004421 ORTHO05D005227 1.5e-45 186.0 109 85.3
FAN09G1846 Fragaria x ananassa HOM05D004421 ORTHO05D005227 1.5e-45 186.0 109 85.3
FAN14G1774 Fragaria x ananassa HOM05D004421 ORTHO05D005227 1.5e-45 186.0 109 85.3
Nitab4.5_0005588g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 1.5e-45 186.0 106 84.0
RcHm_v2.0_Chr2g0158361 Rosa chinensis HOM05D004421 ORTHO05D005227 1.5e-45 186.0 109 85.3
Thecc.07G030200 Theobroma cacao HOM05D004421 ORTHO05D005227 4.4e-45 184.5 107 84.1
LjContig00564g0020145 Lotus japonicus HOM05D004421 ORTHO05D005227 5.7e-45 184.1 103 87.4
LjContig00564g0024160 Lotus japonicus HOM05D004421 ORTHO05D005227 5.7e-45 184.1 103 87.4
QL10p065608 Quercus lobata HOM05D004421 ORTHO05D005227 5.7e-45 184.1 107 83.2
TAR629G1061 Trochodendron aralioides HOM05D004421 ORTHO05D005227 5.7e-45 184.1 109 82.6
ClCG02G009100 Citrullus lanatus HOM05D004421 ORTHO05D005227 7.4e-45 183.7 107 83.2
PGSC0003DMG400010437 Solanum tuberosum HOM05D004421 ORTHO05D005227 9.7e-45 183.3 106 85.8
CAN.G149.31 Capsicum annuum HOM05D004421 ORTHO05D005227 1.3e-44 183.0 106 85.8
QL08p031014 Quercus lobata HOM05D004421 ORTHO05D005227 1.3e-44 183.0 107 83.2
CsaV3_2G034620 Cucumis sativus L. HOM05D004421 ORTHO05D005227 1.7e-44 182.6 109 83.5
LjContig00564g0000485 Lotus japonicus HOM05D004421 ORTHO05D005227 1.7e-44 182.6 103 86.4
LjContig00564g0024311 Lotus japonicus HOM05D004421 ORTHO05D005227 1.7e-44 182.6 103 86.4
Lalb_Chr10g0105671 Lupinus albus HOM05D004421 ORTHO05D005227 2.2e-44 182.2 100 90.0
GSVIVG01036899001 Vitis vinifera HOM05D004421 ORTHO05D005227 2.2e-44 182.2 108 86.1
Gorai.005G241500 Gossypium raimondii HOM05D004421 ORTHO05D005227 2.8e-44 181.8 107 84.1
Manes.13G067100 Manihot esculenta HOM05D004421 ORTHO05D005227 2.8e-44 181.8 107 83.2
Peaxi162Scf00149g00049 Petunia axillaris HOM05D004421 ORTHO05D005227 2.8e-44 181.8 106 83.0
Prupe.3G211700 Prunus persica HOM05D004421 ORTHO05D005227 2.8e-44 181.8 107 84.1
vmacro09354 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 2.8e-44 181.8 106 81.1
CAN.G358.76 Capsicum annuum HOM05D004421 ORTHO05D005227 3.7e-44 181.4 106 84.9
Nitab4.5_0000138g0020 Nicotiana tabacum HOM05D004421 ORTHO05D005227 3.7e-44 181.4 106 82.1
Peaxi162Scf00047g00850 Petunia axillaris HOM05D004421 ORTHO05D005227 3.7e-44 181.4 106 84.0
Sopen02g017940 Solanum pennellii HOM05D004421 ORTHO05D005227 3.7e-44 181.4 103 87.4
SGA_v2.0_scaffold363G49953 Striga asiatica HOM05D004421 ORTHO05D005227 3.7e-44 181.4 109 84.4
CSS0000360 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 4.8e-44 181.0 107 81.3
CSS0029217 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 4.8e-44 181.0 107 81.3
Rhsim04G0051300 Rhododendron simsii HOM05D004421 ORTHO05D005227 4.8e-44 181.0 107 83.2
Haze_12777 Corylus avellana HOM05D004421 ORTHO05D005227 6.3e-44 180.6 109 82.6
Glyma.14G047100 Glycine max HOM05D004421 ORTHO05D005227 8.2e-44 180.3 100 86.0
Nitab4.5_0007533g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 8.2e-44 180.3 106 81.1
Psat4g220560 Pisum sativum HOM05D004421 ORTHO05D005227 8.2e-44 180.3 103 86.4
Solyc02g068770.4 Solanum lycopersicum HOM05D004421 ORTHO05D005227 8.2e-44 180.3 103 86.4
arahy.Tifrunner.gnm1.ann1.J4LN0V Arachis hypogaea HOM05D004421 ORTHO05D005227 1.1e-43 179.9 107 80.4
AUR62030497 Chenopodium quinoa HOM05D004421 ORTHO05D005227 1.1e-43 179.9 108 81.5
Eucgr.B01010 Eucalyptus grandis HOM05D004421 ORTHO05D005227 1.1e-43 179.9 109 81.7
Potri.002G225600 Populus trichocarpa HOM05D004421 ORTHO05D005227 1.1e-43 179.9 106 82.1
VMungo0647G1664 Vigna mungo HOM05D004421 ORTHO05D005227 1.1e-43 179.9 100 86.0
arahy.Tifrunner.gnm1.ann1.BKRM87 Arachis hypogaea HOM05D004421 ORTHO05D005227 1.4e-43 179.5 107 80.4
CiPaw.08G089000 Carya illinoinensis HOM05D004421 ORTHO05D005227 1.4e-43 179.5 103 85.4
Hma1.2p1_0177F.1_g077900 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 1.4e-43 179.5 107 79.4
Hma1.2p1_0177F.1_g077905 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 1.4e-43 179.5 107 79.4
Lsat_1_v5_gn_7_92700 Lactuca sativa HOM05D004421 ORTHO05D005227 1.4e-43 179.5 107 79.4
Cpa.g.sc12.255 Carica papaya HOM05D004421 ORTHO05D005227 1.8e-43 179.1 106 81.1
AUR62030797 Chenopodium quinoa HOM05D004421 ORTHO05D005227 1.8e-43 179.1 108 80.6
DCAR_019262 Daucus carota HOM05D004421 ORTHO05D005227 1.8e-43 179.1 107 81.3
Gohir.A03G192600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 1.8e-43 179.1 107 83.2
HanXRQChr04g0126911 Helianthus annuus HOM05D004421 ORTHO05D005227 2.4e-43 178.7 112 78.6
Aqoxy7G01112 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 3.1e-43 178.3 107 78.5
CiPaw.03G156500 Carya illinoinensis HOM05D004421 ORTHO05D005227 3.1e-43 178.3 103 83.5
CDE04G3645 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 3.1e-43 178.3 101 85.1
DCAR_012923 Daucus carota HOM05D004421 ORTHO05D005227 3.1e-43 178.3 107 81.3
PGR042G0750 Punica granatum HOM05D004421 ORTHO05D005227 3.1e-43 178.3 107 82.2
ATR0665G259 Amborella trichopoda HOM05D004421 ORTHO05D005227 4.1e-43 177.9 99 84.8
Phvul.008G212200 Phaseolus vulgaris HOM05D004421 ORTHO05D005227 4.1e-43 177.9 100 84.0
Nitab4.5_0001288g0200 Nicotiana tabacum HOM05D004421 ORTHO05D005227 5.3e-43 177.6 106 80.2
Ca_23316_v3 Cicer arietinum L. HOM05D004421 ORTHO05D005227 7.0e-43 177.2 100 85.0
Medtr8g016300 Medicago truncatula HOM05D004421 ORTHO05D005227 7.0e-43 177.2 100 87.0
Potri.014G157400 Populus trichocarpa HOM05D004421 ORTHO05D005227 7.0e-43 177.2 107 81.3
Sc12g0002130 Simmondsia chinensis HOM05D004421 ORTHO05D005227 7.0e-43 177.2 107 81.3
CAN.G358.77 Capsicum annuum HOM05D004421 ORTHO05D005227 1.2e-42 176.4 106 83.0
Sabra02G0172700 Salix brachista HOM05D004421 ORTHO05D005227 1.2e-42 176.4 106 80.2
CANSAT64G1364 Cannabis sativa HOM05D004421 ORTHO05D005227 1.6e-42 176.0 100 86.0
Ciclev10009985m.g Citrus clementina HOM05D004421 ORTHO05D005227 1.6e-42 176.0 98 86.7
Gohir.D02G213600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 1.6e-42 176.0 107 82.2
Medtr8g099150 Medicago truncatula HOM05D004421 ORTHO05D005227 1.6e-42 176.0 100 86.0
Duzib128G1691 Durio zibethinus HOM05D004421 ORTHO05D005227 2.0e-42 175.6 107 81.3
Glyma.02G269800 Glycine max HOM05D004421 ORTHO05D005227 2.0e-42 175.6 100 84.0
SGA_v2.0_scaffold159G37698 Striga asiatica HOM05D004421 ORTHO05D005227 2.0e-42 175.6 99 86.9
ECA236G3405 Erigeron canadensis HOM05D004421 ORTHO05D005227 4.5e-42 174.5 109 78.0
TPR.G1800 Trifolium pratense HOM05D004421 ORTHO05D005227 4.5e-42 174.5 103 83.5
MELO3C019309.2 Cucumis melo HOM05D004421 ORTHO05D005227 7.7e-42 173.7 101 85.1
TPR.G7933 Trifolium pratense HOM05D004421 ORTHO05D005227 7.7e-42 173.7 103 82.5
EL10Ac5g12553 Beta vulgaris HOM05D004421 ORTHO05D005227 1.3e-41 172.9 107 81.3
Aqoxy6G00590 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 1.7e-41 172.6 107 77.6
CDE06G2669 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 2.9e-41 171.8 101 82.2
SHI33915 Sapria himalayana HOM05D004421 ORTHO05D005227 3.8e-41 171.4 108 78.7
Rhsim06G0166700 Rhododendron simsii HOM05D004421 ORTHO05D005227 1.5e-40 169.5 107 78.5
Ah.12g058680 Amaranthus hybridus HOM05D004421 ORTHO05D005227 4.2e-40 167.9 107 78.5
Lsat_1_v5_gn_5_123820 Lactuca sativa HOM05D004421 ORTHO05D005227 9.4e-40 166.8 99 78.8
ECA234G2260 Erigeron canadensis HOM05D004421 ORTHO05D005227 1.2e-39 166.4 98 80.6
Atru.chr2.3508 Acer truncatum HOM05D004421 ORTHO05D005227 1.6e-39 166.0 107 79.4
PSO017G4413 Papaver somniferum HOM05D004421 ORTHO05D005227 2.7e-39 165.2 107 72.9
PSO675G5827 Papaver somniferum HOM05D004421 ORTHO05D005227 2.7e-39 165.2 107 72.9
Cc05_g14180 Coffea canephora HOM05D004421 ORTHO05D005227 1.8e-38 162.5 106 76.4
Cc05_g02530 Coffea canephora HOM05D004421 ORTHO05D005227 2.3e-38 162.2 107 74.8
COL.COLO4_09709 Corchorus olitorius HOM05D004421 ORTHO05D005227 8.8e-38 160.2 107 73.8
THA.LOC104811627 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 1.2e-37 159.8 98 78.6
THA.LOC104813431 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 5.7e-37 157.5 98 78.6
Eucgr.B01013 Eucalyptus grandis HOM05D004421 ORTHO05D005227 7.5e-37 157.1 95 82.1
Hund24697 Selenicereus undatus HOM05D004421 ORTHO05D005227 9.7e-37 156.8 100 78.0
MBI16_g23852_MAGBIO Magnolia biondii HOM05D004421 ORTHO05D005227 3.7e-36 154.8 110 70.0
HPP92_026149 Vanilla planifolia HOM05D004421 ORTHO05D005227 1.1e-35 153.3 103 69.9
BolC2t07739H Brassica oleracea HOM05D004421 ORTHO05D005227 1.4e-35 152.9 107 71.0
Zm00001eb211500 Zea mays HOM05D004421 ORTHO05D005227 1.4e-35 152.9 99 75.8
BraA02t06048Z Brassica rapa HOM05D004421 ORTHO05D005227 3.1e-35 151.8 107 68.2
C02p16370 Brassica napus HOM05D004421 ORTHO05D005227 4.1e-35 151.4 107 70.1
Carub.0008s1546 Capsella rubella HOM05D004421 ORTHO05D005227 4.1e-35 151.4 107 70.1
Aa31LG3G11160 Aethionema arabicum HOM05D004421 ORTHO05D005227 7.0e-35 150.6 107 68.2
A02p09830 Brassica napus HOM05D004421 ORTHO05D005227 9.1e-35 150.2 107 67.3
BcaC04g20265 Brassica carinata HOM05D004421 ORTHO05D005227 1.2e-34 149.8 107 69.2
BraA10t43337Z Brassica rapa HOM05D004421 ORTHO05D005227 1.2e-34 149.8 107 69.2
AL8G30670 Arabidopsis lyrata HOM05D004421 ORTHO05D005227 1.6e-34 149.4 107 69.2
AT5G55140 Arabidopsis thaliana HOM05D004421 ORTHO05D005227 2.0e-34 149.1 107 68.2
BcaB05g22185 Brassica carinata HOM05D004421 ORTHO05D005227 2.0e-34 149.1 107 69.2
BcaB08g35879 Brassica carinata HOM05D004421 ORTHO05D005227 2.7e-34 148.7 106 68.9
CARHR268500 Cardamine hirsuta HOM05D004421 ORTHO05D005227 2.7e-34 148.7 107 69.2
Thhalv10015072m.g Eutrema salsugineum HOM05D004421 ORTHO05D005227 2.7e-34 148.7 107 70.1
Sp6g17090 Schrenkiella parvula HOM05D004421 ORTHO05D005227 2.2e-33 145.6 107 67.3
TPR.G40166 Trifolium pratense HOM05D004421 ORTHO05D005227 2.2e-33 145.6 87 83.9
A05p12050 Brassica napus HOM05D004421 ORTHO05D005227 2.9e-33 145.2 108 68.5
A10p12420 Brassica napus HOM05D004421 ORTHO05D005227 2.9e-33 145.2 108 68.5
C09p45840 Brassica napus HOM05D004421 ORTHO05D005227 2.9e-33 145.2 108 68.5
BolC9t57441H Brassica oleracea HOM05D004421 ORTHO05D005227 2.9e-33 145.2 108 68.5
Os08g0110100 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 2.5e-32 142.1 111 65.8
CSS0048822 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 2.7e-31 138.7 107 67.3
Lj2g0010759 Lotus japonicus HOM05D004421 ORTHO05D005227 8.8e-30 133.7 107 67.3
vmacro12170 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 7.5e-29 130.6 82 80.5
SEGI_06591 Sequoiadendron giganteum HOM05D004421 ORTHO05D005227 1.8e-27 125.9 98 61.2
Dinv22240 Davidia involucrata HOM05D004421 ORTHO05D005227 4.1e-27 124.8 66 90.9
BcaC03g14260 Brassica carinata HOM05D004421 ORTHO05D005227 2.0e-26 122.5 81 72.8
BraA03t14310Z Brassica rapa HOM05D004421 ORTHO05D005227 5.0e-25 117.9 96 65.6
Hma1.2p1_2381F.1_g321010 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 8.6e-25 117.1 91 65.9
A08p21130 Brassica napus HOM05D004421 ORTHO05D005227 1.1e-24 116.7 96 65.6
FvH4_6g04610 Fragaria vesca HOM05D004421 ORTHO05D005227 1.9e-24 115.9 75 80.0
Mapoly0058s0042 Marchantia polymorpha HOM05D004421 ORTHO05D005227 3.3e-24 115.2 94 63.8
BcaC03g14258 Brassica carinata HOM05D004421 ORTHO05D005227 1.6e-23 112.8 91 64.8
Migut.H01800 Erythranthe guttata HOM05D004421 ORTHO05D005227 2.1e-23 112.5 56 94.6
Os06g0339800 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 1.0e-22 110.2 97 60.8
AagrBONN_evm.TU.Sc2ySwM_344.5034 Anthoceros agrestis HOM05D004421 ORTHO05D005227 1.4e-22 109.8 90 62.2
Eucgr.B01894 Eucalyptus grandis HOM05D004421 ORTHO05D005227 1.4e-22 109.8 65 80.0
Pp3c26_2200 Physcomitrium patens HOM05D004421 ORTHO05D005227 2.4e-19 99.0 92 56.5
MD09G1112900 Malus domestica HOM05D004421 ORTHO05D005227 4.5e-18 94.7 57 82.5
Potri.010G076275 Populus trichocarpa HOM05D004421 ORTHO05D005227 5.9e-18 94.4 79 64.6
HanXRQChr16g0506671 Helianthus annuus HOM05D004421 ORTHO05D005227 2.3e-17 92.4 57 77.2
GSVIVG01030492001 Vitis vinifera HOM05D004421 ORTHO05D005227 8.6e-17 90.5 58 79.3
Manes.12G070801 Manihot esculenta HOM05D004421 ORTHO05D005227 3.3e-16 88.6 56 73.2
RcHm_v2.0_Chr4g0419171 Rosa chinensis HOM05D004421 ORTHO05D005227 1.2e-15 86.7 109 48.6
SMO172G0081 Selaginella moellendorffii HOM05D004421 ORTHO05D005227 5.8e-13 77.8 86 50.0
Nn2g15167 Nelumbo nucifera HOM05D004421 ORTHO05D005227 1.2e-10 70.1 44 77.3
Cre05.g234659 Chlamydomonas reinhardtii HOM05D004421 ORTHO05D005227 4.3e-08 61.6 90 40.0


User provided reference genes

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