Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010027.3 Olea europaea HOM05D004150 ORTHO05D005087 1.4e-300 1035.4 498 100.0
Oeu058459.1 Olea europaea HOM05D004150 ORTHO05D005087 6.9e-255 883.6 498 85.9
Hma1.2p1_2701F.1_g327060 Hydrangea macrophylla HOM05D004150 ORTHO05D005087 9.4e-220 766.9 498 74.3
Cc05_g10890 Coffea canephora HOM05D004150 ORTHO05D005087 8.8e-218 760.4 498 74.5
MSTRG.14976 Avicennia marina HOM05D004150 ORTHO05D005087 7.7e-214 747.3 500 73.8
GSVIVG01014152001 Vitis vinifera HOM05D004150 ORTHO05D005087 1.2e-209 733.4 498 71.1
CSS0001873 Camellia sinensis var. sinensis HOM05D004150 ORTHO05D005087 2.6e-209 732.3 500 71.4
CSS0042666 Camellia sinensis var. sinensis HOM05D004150 ORTHO05D005087 1.3e-208 729.9 500 71.8
SGA_v2.0_scaffold130G34274 Striga asiatica HOM05D004150 ORTHO05D005087 1.3e-208 729.9 525 70.5
Lj1A826G61 Lonicera japonica HOM05D004150 ORTHO05D005087 7.7e-206 720.7 508 69.7
Cfa019528 Carpinus fangiana HOM05D004150 ORTHO05D005087 1.0e-205 720.3 501 69.3
PGSC0003DMG400007094 Solanum tuberosum HOM05D004150 ORTHO05D005087 2.2e-205 719.2 541 66.0
CAN.G375.32 Capsicum annuum HOM05D004150 ORTHO05D005087 2.5e-204 715.7 543 65.4
Solyc07g062250.3 Solanum lycopersicum HOM05D004150 ORTHO05D005087 9.4e-204 713.8 541 65.4
Nitab4.5_0000347g0180 Nicotiana tabacum HOM05D004150 ORTHO05D005087 1.6e-203 713.0 541 65.6
Peaxi162Scf00111g01477 Petunia axillaris HOM05D004150 ORTHO05D005087 2.1e-203 712.6 542 65.7
Sopen07g030520 Solanum pennellii HOM05D004150 ORTHO05D005087 8.0e-203 710.7 541 65.1
CiPaw.11G157600 Carya illinoinensis HOM05D004150 ORTHO05D005087 1.2e-201 706.8 499 67.9
PGR083G0816 Punica granatum HOM05D004150 ORTHO05D005087 9.8e-201 703.7 502 66.3
MD03G1246300 Malus domestica HOM05D004150 ORTHO05D005087 3.7e-200 701.8 500 67.8
Manes.03G091700 Manihot esculenta HOM05D004150 ORTHO05D005087 4.9e-200 701.4 502 67.3
Lsat_1_v5_gn_9_100501 Lactuca sativa HOM05D004150 ORTHO05D005087 1.8e-199 699.5 503 67.4
Potri.003G026500 Populus trichocarpa HOM05D004150 ORTHO05D005087 1.8e-199 699.5 502 66.9
CANSAT56G2087 Cannabis sativa HOM05D004150 ORTHO05D005087 2.4e-199 699.1 501 66.9
Glyma.13G266400 Glycine max HOM05D004150 ORTHO05D005087 7.0e-199 697.6 504 67.3
Nn6g34456 Nelumbo nucifera HOM05D004150 ORTHO05D005087 7.0e-199 697.6 498 67.5
Psat5g234480 Pisum sativum HOM05D004150 ORTHO05D005087 5.9e-198 694.5 502 68.1
Sc03g0010640 Simmondsia chinensis HOM05D004150 ORTHO05D005087 1.0e-197 693.7 505 68.5
MBI06_g16571_MAGBIO Magnolia biondii HOM05D004150 ORTHO05D005087 2.3e-197 692.6 498 67.5
VMungo1080G1533 Vigna mungo HOM05D004150 ORTHO05D005087 1.5e-196 689.9 508 66.7
Thecc.07G119700 Theobroma cacao HOM05D004150 ORTHO05D005087 3.3e-196 688.7 498 66.5
Glyma.12G231700 Glycine max HOM05D004150 ORTHO05D005087 4.2e-196 688.3 506 67.0
RcHm_v2.0_Chr5g0030011 Rosa chinensis HOM05D004150 ORTHO05D005087 5.5e-196 688.0 502 67.5
SalBow7G0391 Salvia bowleyana HOM05D004150 ORTHO05D005087 1.2e-195 686.8 499 69.5
Potri.011G106600 Populus trichocarpa HOM05D004150 ORTHO05D005087 2.8e-195 685.6 504 66.1
TWI38G0344 Tripterygium wilfordii HOM05D004150 ORTHO05D005087 2.8e-195 685.6 501 65.9
COL.COLO4_17523 Corchorus olitorius HOM05D004150 ORTHO05D005087 1.4e-194 683.3 499 66.3
MD11G1267300 Malus domestica HOM05D004150 ORTHO05D005087 1.4e-194 683.3 500 66.4
Phvul.005G079200 Phaseolus vulgaris HOM05D004150 ORTHO05D005087 4.0e-194 681.8 508 66.1
HanXRQChr10g0305531 Helianthus annuus HOM05D004150 ORTHO05D005087 5.2e-194 681.4 505 66.1
Eucgr.F01300 Eucalyptus grandis HOM05D004150 ORTHO05D005087 6.8e-194 681.0 505 65.5
EL10Ac4g08396 Beta vulgaris HOM05D004150 ORTHO05D005087 2.6e-193 679.1 501 66.3
vmacro09408 Vaccinium macrocarpon HOM05D004150 ORTHO05D005087 2.6e-193 679.1 507 66.9
Ca_03941_v3 Cicer arietinum L. HOM05D004150 ORTHO05D005087 1.1e-191 673.7 506 65.4
Actinidia21439 Actinidia chinensis HOM05D004150 ORTHO05D005087 1.4e-191 673.3 500 67.6
Medtr2g075340 Medicago truncatula HOM05D004150 ORTHO05D005087 1.4e-191 673.3 498 65.7
CsaV3_4G032910 Cucumis sativus L. HOM05D004150 ORTHO05D005087 2.4e-191 672.5 500 64.8
Rhsim04G0036400 Rhododendron simsii HOM05D004150 ORTHO05D005087 2.4e-191 672.5 505 67.1
Gohir.A01G052900 Gossypium hirsutum HOM05D004150 ORTHO05D005087 7.0e-191 671.0 498 64.9
Manes.15G097400 Manihot esculenta HOM05D004150 ORTHO05D005087 7.0e-191 671.0 501 64.9
Atru.chr2.2029 Acer truncatum HOM05D004150 ORTHO05D005087 1.2e-190 670.2 502 66.5
PSO170G1443 Papaver somniferum HOM05D004150 ORTHO05D005087 1.2e-190 670.2 505 64.6
Rhsim04G0035400 Rhododendron simsii HOM05D004150 ORTHO05D005087 3.5e-190 668.7 505 66.7
Gohir.A13G149900 Gossypium hirsutum HOM05D004150 ORTHO05D005087 7.8e-190 667.5 499 65.1
Gorai.002G053300 Gossypium raimondii HOM05D004150 ORTHO05D005087 7.8e-190 667.5 500 64.6
Atru.chr2.2041 Acer truncatum HOM05D004150 ORTHO05D005087 1.0e-189 667.2 502 66.3
TWI39G0561 Tripterygium wilfordii HOM05D004150 ORTHO05D005087 6.6e-189 664.5 501 63.3
Gohir.D01G042500 Gossypium hirsutum HOM05D004150 ORTHO05D005087 8.6e-189 664.1 500 64.4
Lj3g0004524 Lotus japonicus HOM05D004150 ORTHO05D005087 1.9e-188 662.9 510 66.5
PSO782G0021 Papaver somniferum HOM05D004150 ORTHO05D005087 1.9e-188 662.9 505 64.0
TAR629G2423 Trochodendron aralioides HOM05D004150 ORTHO05D005087 4.3e-188 661.8 457 69.1
FAN21G0088 Fragaria x ananassa HOM05D004150 ORTHO05D005087 7.3e-188 661.0 502 64.9
Ciclev10019972m.g Citrus clementina HOM05D004150 ORTHO05D005087 2.8e-187 659.1 505 64.0
Aqoxy1G01964 Aquilegia oxysepala HOM05D004150 ORTHO05D005087 4.7e-187 658.3 498 63.7
FvH4_3g17970 Fragaria vesca HOM05D004150 ORTHO05D005087 8.0e-187 657.5 503 65.0
Lalb_Chr19g0133751 Lupinus albus HOM05D004150 ORTHO05D005087 1.5e-185 653.3 502 63.7
Lalb_Chr25g0285681 Lupinus albus HOM05D004150 ORTHO05D005087 3.4e-185 652.1 501 64.9
Migut.H02018 Erythranthe guttata HOM05D004150 ORTHO05D005087 2.9e-184 649.0 461 69.4
Sabra16G0254300 Salix brachista HOM05D004150 ORTHO05D005087 2.9e-184 649.0 551 59.9
MELO3C025660.2 Cucumis melo HOM05D004150 ORTHO05D005087 4.9e-184 648.3 508 62.4
THA.LOC104815577 Tarenaya hassleriana HOM05D004150 ORTHO05D005087 6.4e-184 647.9 501 62.9
THA.LOC104810428 Tarenaya hassleriana HOM05D004150 ORTHO05D005087 1.9e-183 646.4 501 63.3
Dinv15009 Davidia involucrata HOM05D004150 ORTHO05D005087 7.0e-183 644.4 389 79.2
HanXRQChr17g0556791 Helianthus annuus HOM05D004150 ORTHO05D005087 1.6e-182 643.3 499 63.5
FAN25G1025 Fragaria x ananassa HOM05D004150 ORTHO05D005087 2.7e-182 642.5 541 61.0
ClCG11G017260 Citrullus lanatus HOM05D004150 ORTHO05D005087 3.5e-182 642.1 565 57.0
FAN16G0401 Fragaria x ananassa HOM05D004150 ORTHO05D005087 9.5e-180 634.0 539 60.1
Actinidia12595 Actinidia chinensis HOM05D004150 ORTHO05D005087 2.1e-179 632.9 566 56.7
FAN11G2611 Fragaria x ananassa HOM05D004150 ORTHO05D005087 6.2e-179 631.3 522 61.9
AUR62019617 Chenopodium quinoa HOM05D004150 ORTHO05D005087 1.7e-176 623.2 503 63.2
AUR62039606 Chenopodium quinoa HOM05D004150 ORTHO05D005087 1.4e-175 620.2 503 62.6
Ah.04g164080 Amaranthus hybridus HOM05D004150 ORTHO05D005087 2.4e-175 619.4 501 62.1
Sed0003063 Sechium edule HOM05D004150 ORTHO05D005087 7.1e-175 617.8 459 65.4
Gohir.D13G154200 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.2e-174 617.1 458 65.7
Lalb_Chr03g0031251 Lupinus albus HOM05D004150 ORTHO05D005087 1.6e-174 616.7 501 61.1
ECA234G0958 Erigeron canadensis HOM05D004150 ORTHO05D005087 2.1e-174 616.3 505 61.0
Aa31LG8G2040 Aethionema arabicum HOM05D004150 ORTHO05D005087 1.3e-173 613.6 500 59.8
TPR.G13030 Trifolium pratense HOM05D004150 ORTHO05D005087 3.9e-173 612.1 508 61.4
Dinv18386 Davidia involucrata HOM05D004150 ORTHO05D005087 1.1e-170 604.0 389 75.6
TAR627G0919 Trochodendron aralioides HOM05D004150 ORTHO05D005087 3.1e-170 602.4 389 73.5
AL3G27140 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 2.9e-168 595.9 502 59.0
Prupe.4G158300 Prunus persica HOM05D004150 ORTHO05D005087 8.4e-168 594.3 402 72.1
AT3G14830 Arabidopsis thaliana HOM05D004150 ORTHO05D005087 1.4e-167 593.6 503 58.6
Gorai.013G174200 Gossypium raimondii HOM05D004150 ORTHO05D005087 7.1e-167 591.3 510 59.0
CARHR089770 Cardamine hirsuta HOM05D004150 ORTHO05D005087 7.8e-166 587.8 505 58.4
Potri.001G386700 Populus trichocarpa HOM05D004150 ORTHO05D005087 1.5e-164 583.6 393 71.0
CARHR043670 Cardamine hirsuta HOM05D004150 ORTHO05D005087 3.6e-163 578.9 499 57.3
Sp1g39990 Schrenkiella parvula HOM05D004150 ORTHO05D005087 8.9e-162 574.3 500 57.0
BolC5t33929H Brassica oleracea HOM05D004150 ORTHO05D005087 2.0e-161 573.2 501 58.1
Carub.0003s1449 Capsella rubella HOM05D004150 ORTHO05D005087 2.0e-161 573.2 508 57.5
BcaC05g29034 Brassica carinata HOM05D004150 ORTHO05D005087 1.7e-160 570.1 503 57.9
C05p52450 Brassica napus HOM05D004150 ORTHO05D005087 1.7e-160 570.1 503 57.9
Thhalv10011465m.g Eutrema salsugineum HOM05D004150 ORTHO05D005087 6.4e-160 568.2 500 57.0
Carub.0001s4264 Capsella rubella HOM05D004150 ORTHO05D005087 5.4e-159 565.1 499 55.9
BcaB06g25355 Brassica carinata HOM05D004150 ORTHO05D005087 9.3e-159 564.3 500 58.0
BraA05t22282Z Brassica rapa HOM05D004150 ORTHO05D005087 1.6e-158 563.5 502 57.0
A05p34660 Brassica napus HOM05D004150 ORTHO05D005087 2.1e-158 563.1 503 57.1
ATR0127G006 Amborella trichopoda HOM05D004150 ORTHO05D005087 7.8e-158 561.2 508 57.5
AT1G53450 Arabidopsis thaliana HOM05D004150 ORTHO05D005087 1.9e-156 556.6 499 55.5
BcaB07g33329 Brassica carinata HOM05D004150 ORTHO05D005087 1.9e-156 556.6 502 54.8
A06p01010 Brassica napus HOM05D004150 ORTHO05D005087 2.1e-155 553.1 503 55.1
BraA06t23329Z Brassica rapa HOM05D004150 ORTHO05D005087 3.6e-155 552.4 503 55.1
BcaC08g43529 Brassica carinata HOM05D004150 ORTHO05D005087 1.5e-153 547.0 503 54.3
BolC6t35999H Brassica oleracea HOM05D004150 ORTHO05D005087 1.5e-153 547.0 503 54.3
C06p09220 Brassica napus HOM05D004150 ORTHO05D005087 4.9e-152 542.0 499 53.5
ECA240G3777 Erigeron canadensis HOM05D004150 ORTHO05D005087 1.1e-151 540.8 422 64.0
Nn3g21055 Nelumbo nucifera HOM05D004150 ORTHO05D005087 2.3e-149 533.1 403 64.8
Duzib213G1096 Durio zibethinus HOM05D004150 ORTHO05D005087 5.1e-149 531.9 459 59.9
Hund10457 Selenicereus undatus HOM05D004150 ORTHO05D005087 8.7e-149 531.2 461 59.2
Sabra11G0094900 Salix brachista HOM05D004150 ORTHO05D005087 2.5e-148 529.6 438 61.9
CDE06G0863 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 2.0e-145 520.0 482 55.2
Zm00001eb154220 Zea mays HOM05D004150 ORTHO05D005087 6.4e-144 515.0 527 51.8
Os01g0729900 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 3.2e-143 512.7 518 50.4
unitig_21.g20061 Utricularia gibba HOM05D004150 ORTHO05D005087 2.1e-142 510.0 501 54.9
CiPaw.12G111300 Carya illinoinensis HOM05D004150 ORTHO05D005087 2.1e-139 500.0 351 68.9
QL08p025853 Quercus lobata HOM05D004150 ORTHO05D005087 4.0e-138 495.7 314 72.9
Os05g0530300 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 5.3e-138 495.4 532 48.5
Nitab4.5_0024430g0010 Nicotiana tabacum HOM05D004150 ORTHO05D005087 7.9e-134 481.5 311 73.3
HPP92_005189 Vanilla planifolia HOM05D004150 ORTHO05D005087 2.1e-131 473.4 455 52.7
Cpa.g.sc77.46 Carica papaya HOM05D004150 ORTHO05D005087 1.5e-129 467.2 306 70.6
Zm00001eb361900 Zea mays HOM05D004150 ORTHO05D005087 3.4e-129 466.1 484 50.8
AL1G61960 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 5.5e-119 432.2 332 59.3
DCAR_013267 Daucus carota HOM05D004150 ORTHO05D005087 2.0e-116 423.7 314 63.7
Mapoly0001s0101 Marchantia polymorpha HOM05D004150 ORTHO05D005087 7.4e-108 395.2 579 41.8
SMO169G0186 Selaginella moellendorffii HOM05D004150 ORTHO05D005087 6.3e-107 392.1 310 61.9
CDE02G2021 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 7.0e-106 388.7 297 63.6
AagrBONN_evm.TU.Sc2ySwM_362.2802 Anthoceros agrestis HOM05D004150 ORTHO05D005087 8.5e-104 381.7 552 40.2
Os06g0152800 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 3.0e-101 373.2 316 54.4
Hma1.2p1_1650F.1_g295710 Hydrangea macrophylla HOM05D004150 ORTHO05D005087 1.5e-100 370.9 295 65.4
Zm00001eb271010 Zea mays HOM05D004150 ORTHO05D005087 7.5e-92 342.0 324 50.3
Pp3c9_8060 Physcomitrium patens HOM05D004150 ORTHO05D005087 1.1e-90 338.2 565 37.7
SEGI_28417 Sequoiadendron giganteum HOM05D004150 ORTHO05D005087 9.1e-90 335.1 413 41.4
Zm00001eb293260 Zea mays HOM05D004150 ORTHO05D005087 2.4e-82 310.5 380 45.8
Mapoly0030s0045 Marchantia polymorpha HOM05D004150 ORTHO05D005087 1.8e-69 267.7 427 40.7
Haze_09266 Corylus avellana HOM05D004150 ORTHO05D005087 5.4e-58 229.6 217 55.3
Haze_09270 Corylus avellana HOM05D004150 ORTHO05D005087 5.4e-58 229.6 229 50.2
Gorai.010G164000 Gossypium raimondii HOM05D004150 ORTHO05D005087 2.1e-46 191.0 203 48.8
EL10Ac9g22809 Beta vulgaris HOM05D004150 ORTHO05D005087 7.1e-42 176.0 189 50.8
Gohir.A02G079101 Gossypium hirsutum HOM05D004150 ORTHO05D005087 7.1e-42 176.0 147 59.2
QL08p025867 Quercus lobata HOM05D004150 ORTHO05D005087 5.1e-40 169.9 190 52.1
Gorai.001G168800 Gossypium raimondii HOM05D004150 ORTHO05D005087 4.3e-39 166.8 94 79.8
Gohir.D04G018433 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.6e-38 164.9 93 79.6
Gohir.A11G228702 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.1e-37 162.2 94 77.7
Actinidia33318 Actinidia chinensis HOM05D004150 ORTHO05D005087 2.4e-37 161.0 178 47.8
AL1G62010 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 2.4e-37 161.0 128 64.1
VMungo1309G1261 Vigna mungo HOM05D004150 ORTHO05D005087 3.8e-35 153.7 108 67.6
Haze_09267 Corylus avellana HOM05D004150 ORTHO05D005087 1.9e-31 141.4 168 45.2
Haze_09268 Corylus avellana HOM05D004150 ORTHO05D005087 1.9e-31 141.4 168 45.2
arahy.Tifrunner.gnm1.ann1.H8RDCT Arachis hypogaea HOM05D004150 ORTHO05D005087 7.4e-31 139.4 88 68.2
arahy.Tifrunner.gnm1.ann1.R67SZW Arachis hypogaea HOM05D004150 ORTHO05D005087 7.4e-31 139.4 88 68.2
Aqoxy1G01962 Aquilegia oxysepala HOM05D004150 ORTHO05D005087 1.6e-30 138.3 136 50.7
CDE09G0238 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 4.5e-28 130.2 151 42.4
BolC5t30531H Brassica oleracea HOM05D004150 ORTHO05D032065 3.8e-27 127.1 173 43.4
Haze_11864 Corylus avellana HOM05D004150 ORTHO05D005087 5.1e-24 116.7 155 42.6
VMungo0251G3124 Vigna mungo HOM05D004150 ORTHO05D005087 2.1e-17 94.7 72 61.1
ECA240G1314 Erigeron canadensis HOM05D000062 ORTHO05D000043 6.9e-13 79.7 45 77.8


User provided reference genes

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