Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008480.1 Olea europaea HOM05D006547 ORTHO05D008112 3.7e-59 231.5 130 100.0
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 6.0e-41 171.0 129 76.0
CAN.G293.16 Capsicum annuum HOM05D006547 ORTHO05D008112 4.0e-21 105.1 138 50.0
Thecc.02G266700 Theobroma cacao HOM05D006547 ORTHO05D008112 9.9e-20 100.5 143 47.6
TAR362G1145 Trochodendron aralioides HOM05D006547 ORTHO05D008112 9.9e-20 100.5 148 48.6
TAR633G2779 Trochodendron aralioides HOM05D006547 ORTHO05D008112 2.9e-19 99.0 146 49.3
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 4.9e-19 98.2 114 55.3
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 8.4e-19 97.4 142 48.6
MSTRG.21702 Avicennia marina HOM05D006547 ORTHO05D008112 1.1e-18 97.1 137 49.6
Atru.chr5.966 Acer truncatum HOM05D006547 ORTHO05D008112 7.1e-18 94.4 153 43.8
Oeu044737.1 Olea europaea HOM05D006547 ORTHO05D008112 2.1e-17 92.8 107 52.3
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 2.7e-17 92.4 147 49.7
Duzib248G0337 Durio zibethinus HOM05D006547 ORTHO05D008112 3.5e-17 92.0 146 46.6
Manes.01G229900 Manihot esculenta HOM05D006547 ORTHO05D008112 4.6e-17 91.7 136 46.3
PGSC0003DMG400009058 Solanum tuberosum HOM05D006547 ORTHO05D008112 7.8e-17 90.9 129 48.8
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 1.3e-16 90.1 115 53.9
SGA_v2.0_scaffold334G49085 Striga asiatica HOM05D006547 ORTHO05D008112 3.0e-16 89.0 83 59.0
DCAR_005744 Daucus carota HOM05D006547 ORTHO05D008112 3.9e-16 88.6 129 51.2
Duzib268G0572 Durio zibethinus HOM05D006547 ORTHO05D008112 3.9e-16 88.6 110 53.6
Nitab4.5_0000363g0200 Nicotiana tabacum HOM05D006547 ORTHO05D008112 5.1e-16 88.2 123 52.8
CSS0011798 Camellia sinensis var. sinensis HOM05D006547 ORTHO05D008112 6.6e-16 87.8 110 52.7
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 6.6e-16 87.8 115 49.6
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 6.6e-16 87.8 151 43.0
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 1.5e-15 86.7 147 46.3
Gohir.A12G145800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 1.9e-15 86.3 113 53.1
CAN.G1280.37 Capsicum annuum HOM05D006547 ORTHO05D008112 2.5e-15 85.9 97 51.5
Duzib251G0664 Durio zibethinus HOM05D006547 ORTHO05D008112 2.5e-15 85.9 117 51.3
COL.COLO4_23526 Corchorus olitorius HOM05D006547 ORTHO05D008112 3.3e-15 85.5 119 49.6
Gohir.D12G150400 Gossypium hirsutum HOM05D006547 ORTHO05D008112 3.3e-15 85.5 113 53.1
Gorai.008G161900 Gossypium raimondii HOM05D006547 ORTHO05D008112 3.3e-15 85.5 113 53.1
Solyc01g079270.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 4.3e-15 85.1 132 47.7
Sopen01g031050 Solanum pennellii HOM05D006547 ORTHO05D008112 4.3e-15 85.1 129 47.3
TWI36G0249 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 2.1e-14 82.8 144 46.5
Migut.D00065 Erythranthe guttata HOM05D006547 ORTHO05D008112 2.8e-14 82.4 99 55.6
Gohir.D01G152800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 6.2e-14 81.3 132 47.7
Gorai.002G189200 Gossypium raimondii HOM05D006547 ORTHO05D008112 6.2e-14 81.3 132 47.7
CiPaw.08G087700 Carya illinoinensis HOM05D006547 ORTHO05D008112 8.1e-14 80.9 119 46.2
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 8.1e-14 80.9 127 46.5
PGSC0003DMG401007298 Solanum tuberosum HOM05D006547 ORTHO05D008112 8.1e-14 80.9 107 50.5
SalBow3G4324 Salvia bowleyana HOM05D006547 ORTHO05D008112 1.4e-13 80.1 94 54.3
Manes.05G013600 Manihot esculenta HOM05D006547 ORTHO05D008112 5.3e-13 78.2 123 47.2
Nitab4.5_0000222g0070 Nicotiana tabacum HOM05D006547 ORTHO05D008112 5.3e-13 78.2 60 66.7
Cfa005764 Carpinus fangiana HOM05D006547 ORTHO05D008112 6.9e-13 77.8 142 46.5
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 6.9e-13 77.8 120 46.7
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 6.9e-13 77.8 127 43.3
Cpa.g.sc18.81 Carica papaya HOM05D006547 ORTHO05D008112 9.0e-13 77.4 141 48.2
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 1.2e-12 77.0 136 44.9
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 1.2e-12 77.0 130 42.3
DCAR_018278 Daucus carota HOM05D006547 ORTHO05D008112 1.5e-12 76.6 135 43.0
Solyc06g009510.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 1.5e-12 76.6 103 49.5
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 2.0e-12 76.3 130 40.8
Phvul.007G089100 Phaseolus vulgaris HOM05D006547 ORTHO05D008112 2.0e-12 76.3 134 46.3
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea HOM05D006547 ORTHO05D008112 2.6e-12 75.9 129 45.7
Sopen06g004170 Solanum pennellii HOM05D006547 ORTHO05D008112 2.6e-12 75.9 101 49.5
CiPaw.07G119400 Carya illinoinensis HOM05D006547 ORTHO05D008112 4.4e-12 75.1 120 45.0
DCAR_002885 Daucus carota HOM05D006547 ORTHO05D008112 4.4e-12 75.1 125 44.8
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 4.4e-12 75.1 133 46.6
Gohir.A01G157750 Gossypium hirsutum HOM05D006547 ORTHO05D008112 5.8e-12 74.7 132 44.7
Peaxi162Scf00058g00236 Petunia axillaris HOM05D006547 ORTHO05D008112 5.8e-12 74.7 70 61.4
SGA_v2.0_scaffold376G50290 Striga asiatica HOM05D006547 ORTHO05D008112 5.8e-12 74.7 120 45.0
FAN26G3307 Fragaria x ananassa HOM05D006547 ORTHO05D008112 7.6e-12 74.3 149 37.6
Haze_05072 Corylus avellana HOM05D006547 ORTHO05D008112 1.7e-11 73.2 139 46.0
Glyma.10G217100 Glycine max HOM05D006547 ORTHO05D008112 1.7e-11 73.2 134 41.0
Prupe.3G008700 Prunus persica HOM05D006547 ORTHO05D008112 1.7e-11 73.2 130 40.0
Actinidia25863 Actinidia chinensis HOM05D006547 ORTHO05D008112 2.9e-11 72.4 100 50.0
BraA05t19055Z Brassica rapa HOM05D006547 ORTHO05D008112 3.8e-11 72.0 126 36.5
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 3.8e-11 72.0 94 47.9
FAN19G2346 Fragaria x ananassa HOM05D006547 ORTHO05D008112 4.9e-11 71.6 149 34.9
Nitab4.5_0007407g0060 Nicotiana tabacum HOM05D006547 ORTHO05D008112 4.9e-11 71.6 71 57.7
TWI18G0834 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 4.9e-11 71.6 139 44.6
Carub.0004s3001 Capsella rubella HOM05D006547 ORTHO05D008112 6.4e-11 71.2 101 43.6
FvH4_1g26990 Fragaria vesca HOM05D006547 ORTHO05D008112 6.4e-11 71.2 149 34.9
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 8.4e-11 70.9 139 38.8
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 1.1e-10 70.5 102 46.1
A05p00570 Brassica napus HOM05D006547 ORTHO05D008112 4.2e-10 68.6 110 40.0
BolC4t21695H Brassica oleracea HOM05D006547 ORTHO05D008112 4.2e-10 68.6 110 40.0
RcHm_v2.0_Chr3g0487231 Rosa chinensis HOM05D006547 ORTHO05D008112 5.4e-10 68.2 84 52.4
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 7.1e-10 67.8 80 51.2
Sc05g0000320 Simmondsia chinensis HOM05D006547 ORTHO05D008112 9.3e-10 67.4 100 45.0
Dinv10120 Davidia involucrata HOM05D006547 ORTHO05D008112 1.2e-09 67.0 105 47.6
FAN28G2331 Fragaria x ananassa HOM05D006547 ORTHO05D008112 1.2e-09 67.0 152 36.2
AL302U10010 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 2.7e-09 65.9 99 43.4
AL4G46840 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 2.7e-09 65.9 99 43.4
AT2G47270 Arabidopsis thaliana HOM05D006547 ORTHO05D008112 2.7e-09 65.9 99 43.4
CARHR142670 Cardamine hirsuta HOM05D006547 ORTHO05D008112 2.7e-09 65.9 110 39.1
FAN23G3047 Fragaria x ananassa HOM05D006547 ORTHO05D008112 2.7e-09 65.9 152 36.2
Nn3g21744 Nelumbo nucifera HOM05D006547 ORTHO05D008112 2.7e-09 65.9 134 41.0
EL10As5g23562 Beta vulgaris HOM05D006547 ORTHO05D008112 3.5e-09 65.5 79 55.7
BcaB02g08786 Brassica carinata HOM05D006547 ORTHO05D008112 3.5e-09 65.5 90 41.1
C04p00620 Brassica napus HOM05D006547 ORTHO05D008112 3.5e-09 65.5 107 40.2
BcaC01g05038 Brassica carinata HOM05D006547 ORTHO05D008112 4.6e-09 65.1 118 37.3
C03p30880 Brassica napus HOM05D006547 ORTHO05D008112 4.6e-09 65.1 118 37.3
BolC3t15440H Brassica oleracea HOM05D006547 ORTHO05D008112 4.6e-09 65.1 118 37.3
DCAR_012331 Daucus carota HOM05D006547 ORTHO05D008112 4.6e-09 65.1 94 44.7
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 4.6e-09 65.1 125 42.4
Rhsim13G0003400 Rhododendron simsii HOM05D006547 ORTHO05D008112 4.6e-09 65.1 111 45.9
Sp4g29240 Schrenkiella parvula HOM05D006547 ORTHO05D008112 4.6e-09 65.1 102 41.2
Thhalv10001736m.g Eutrema salsugineum HOM05D006547 ORTHO05D008112 6.0e-09 64.7 93 41.9
HanXRQChr15g0465071 Helianthus annuus HOM05D006547 ORTHO05D008112 6.0e-09 64.7 94 46.8
Lsat_1_v5_gn_9_4661 Lactuca sativa HOM05D006547 ORTHO05D008112 6.0e-09 64.7 133 39.1
MD17G1278000 Malus domestica HOM05D006547 ORTHO05D008112 6.0e-09 64.7 133 42.1
Sc17g0000340 Simmondsia chinensis HOM05D006547 ORTHO05D008112 6.0e-09 64.7 93 46.2
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 7.8e-09 64.3 133 42.1
MD09G1285300 Malus domestica HOM05D006547 ORTHO05D008112 7.8e-09 64.3 59 57.6
CANSAT25G1528 Cannabis sativa HOM05D006547 ORTHO05D008112 1.3e-08 63.5 55 61.8
TPR.G8830 Trifolium pratense HOM05D006547 ORTHO05D008112 1.3e-08 63.5 133 39.1
vmacro02389 Vaccinium macrocarpon HOM05D006547 ORTHO05D008112 1.7e-08 63.2 119 42.9
PSO761G0312 Papaver somniferum HOM05D006547 ORTHO05D008112 2.3e-08 62.8 145 39.3
CsaV3_3G026610 Cucumis sativus L. HOM05D006547 ORTHO05D008112 3.0e-08 62.4 85 42.4
Nn4g25552 Nelumbo nucifera HOM05D006547 ORTHO05D008112 3.9e-08 62.0 76 50.0
THA.LOC104817451 Tarenaya hassleriana HOM05D006547 ORTHO05D008112 5.1e-08 61.6 55 61.8
BcaB01g03174 Brassica carinata HOM05D006547 ORTHO05D008112 6.6e-08 61.2 102 39.2
Ciclev10006764m.g Citrus clementina HOM05D006547 ORTHO05D008112 1.1e-07 60.5 79 48.1
Aa31LG1G28590 Aethionema arabicum HOM05D006547 ORTHO05D008112 1.5e-07 60.1 101 39.6
HanXRQChr10g0285031 Helianthus annuus HOM05D006547 ORTHO05D008112 1.5e-07 60.1 58 56.9
PSO210G6541 Papaver somniferum HOM05D006547 ORTHO05D008112 1.9e-07 59.7 117 42.7
MELO3C012934.2 Cucumis melo HOM05D006547 ORTHO05D008112 2.5e-07 59.3 85 41.2
ECA247G3592 Erigeron canadensis HOM05D006547 ORTHO05D008112 3.3e-07 58.9 108 40.7
ClCG10G011560 Citrullus lanatus HOM05D006547 ORTHO05D008112 5.6e-07 58.2 84 39.3
C04p72660 Brassica napus HOM05D006547 ORTHO05D008112 1.6e-06 56.6 110 36.4
BcaB06g29454 Brassica carinata HOM05D006547 ORTHO05D008112 2.1e-06 56.2 102 38.2
A04p34890 Brassica napus HOM05D006547 ORTHO05D008112 2.1e-06 56.2 102 37.3
BraSC79t46680Z Brassica rapa HOM05D006547 ORTHO05D008112 2.1e-06 56.2 102 37.3
Dinv21566 Davidia involucrata HOM05D006973 ORTHO05D008636 6.2e-06 54.7 93 34.4


User provided reference genes

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