Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 2.2e-146 522.3 268 100.0
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 4.3e-102 375.2 264 71.2
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 2.8e-101 372.5 268 73.1
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 5.2e-100 368.2 267 70.4
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 3.8e-98 362.1 264 70.8
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 2.4e-97 359.4 265 69.1
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 1.6e-96 356.7 264 69.3
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 2.1e-96 356.3 264 69.7
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 2.7e-96 355.9 264 69.3
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 4.6e-96 355.1 265 69.4
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 3.0e-95 352.4 270 70.4
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 3.0e-95 352.4 264 68.9
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 3.9e-95 352.1 259 70.3
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 1.5e-94 350.1 230 77.0
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 1.5e-94 350.1 264 67.4
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 1.9e-94 349.7 233 74.2
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 4.9e-90 335.1 255 69.4
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 6.4e-90 334.7 264 67.4
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 1.6e-88 330.1 255 70.2
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 1.5e-86 323.6 269 65.1
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 4.8e-85 318.5 264 61.4
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 2.2e-82 309.7 254 63.8
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 2.9e-82 309.3 270 61.9
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 3.8e-82 308.9 266 63.5
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 8.4e-82 307.8 255 64.3
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 1.1e-81 307.4 261 64.8
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 1.9e-81 306.6 266 62.8
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 2.4e-81 306.2 266 63.5
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 5.4e-81 305.1 265 61.1
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 1.0e-79 300.8 259 63.7
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 5.1e-79 298.5 243 64.2
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 3.3e-78 295.8 267 58.8
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 9.6e-78 294.3 263 62.0
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 9.6e-78 294.3 267 62.2
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 3.7e-77 292.4 265 58.5
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 6.2e-77 291.6 269 61.3
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 1.1e-76 290.8 265 58.1
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 1.4e-76 290.4 222 68.5
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 3.1e-76 289.3 268 60.4
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 6.9e-76 288.1 266 57.9
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.0e-75 286.6 265 57.4
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 7.6e-75 284.6 278 60.1
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 7.6e-75 284.6 265 57.4
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 1.3e-74 283.9 270 57.8
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 2.2e-74 283.1 258 59.7
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 2.2e-74 283.1 258 60.1
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 6.4e-74 281.6 266 56.8
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 2.1e-72 276.6 235 61.7
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 4.6e-72 275.4 211 66.8
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 6.0e-72 275.0 266 56.0
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.3e-71 273.1 266 57.1
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 8.7e-71 271.2 266 55.3
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 2.5e-70 269.6 241 62.2
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 3.3e-70 269.2 269 55.8
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 4.3e-70 268.9 286 53.5
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 1.3e-69 267.3 287 53.3
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 1.6e-69 266.9 266 57.5
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 2.1e-69 266.5 269 55.4
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 2.1e-69 266.5 258 57.0
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 1.1e-68 264.2 259 55.6
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 6.9e-68 261.5 268 54.9
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 1.3e-66 257.3 345 46.1
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 1.3e-66 257.3 267 56.6
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 2.2e-66 256.5 230 60.4
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 3.8e-66 255.8 219 60.3
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 4.9e-66 255.4 219 64.4
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 8.4e-66 254.6 262 56.5
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 1.9e-65 253.4 258 57.0
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 7.1e-65 251.5 258 56.2
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 2.7e-64 249.6 268 54.1
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 1.8e-63 246.9 260 54.2
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 1.8e-63 246.9 260 54.2
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 5.1e-63 245.4 257 54.5
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 5.1e-63 245.4 260 53.1
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 6.7e-63 245.0 268 53.0
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 1.1e-62 244.2 266 54.1
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 1.1e-62 244.2 266 54.1
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 4.3e-62 242.3 257 53.7
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 5.7e-62 241.9 259 53.7
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 5.7e-62 241.9 362 43.9
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 4.8e-61 238.8 210 61.4
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 6.3e-61 238.4 270 50.4
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 1.1e-60 237.7 247 55.9
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 6.9e-60 235.0 302 47.7
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 1.5e-59 233.8 263 52.1
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 6.5e-58 228.4 229 56.8
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.8e-55 220.3 221 55.7
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 3.0e-55 219.5 256 49.2
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 6.3e-53 211.8 262 49.6
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 8.2e-53 211.5 209 56.9
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 2.0e-51 206.8 181 61.3
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 3.4e-51 206.1 266 47.7
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 1.7e-50 203.8 274 46.7
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 1.7e-50 203.8 274 46.7
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 6.5e-50 201.8 263 48.7
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 6.5e-50 201.8 263 48.7
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 8.5e-50 201.4 271 46.9
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 1.4e-47 194.1 235 48.1
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 5.1e-47 192.2 253 48.2
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 1.1e-46 191.0 259 46.7
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 1.1e-46 191.0 269 45.7
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 1.5e-46 190.7 257 45.5
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 1.5e-46 190.7 217 52.5
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 3.3e-46 189.5 265 45.7
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 7.4e-46 188.3 270 45.9
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 7.4e-46 188.3 257 45.1
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 1.3e-45 187.6 259 47.1
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 2.0e-43 180.3 119 72.3
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 2.5e-41 173.3 181 53.0
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 2.5e-41 173.3 265 43.0
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 3.9e-39 166.0 160 55.6
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 4.8e-37 159.1 94 84.0
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 4.8e-37 159.1 227 46.3
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 4.7e-32 142.5 159 47.8
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 1.5e-30 137.5 106 66.0
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 1.1e-28 131.3 177 43.5
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 1.3e-26 124.4 75 82.7
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 1.7e-26 124.0 76 81.6
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 8.0e-24 115.2 185 39.5
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 1.8e-23 114.0 122 52.5
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 2.6e-22 110.2 179 37.4
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 2.2e-21 107.1 151 43.0
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 3.7e-21 106.3 161 42.9
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 8.3e-21 105.1 82 68.3
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 7.7e-19 98.6 209 34.4
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 1.5e-17 94.4 54 83.3
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 7.2e-17 92.0 218 32.1
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 7.2e-17 92.0 63 68.3
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 2.8e-16 90.1 56 82.1
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-13 79.7 130 40.0
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 5.6e-09 65.9 66 50.0
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 2.8e-08 63.5 146 37.7
CARHR102160 Cardamine hirsuta HOM05D005913 ORTHO05D007138 5.8e-06 55.8 94 40.4


User provided reference genes

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