Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007595.1 Olea europaea HOM05D002036 ORTHO05D001913 4.0e-153 544.7 265 100.0
Oeu049192.1 Olea europaea HOM05D002036 ORTHO05D001913 7.4e-30 135.2 113 66.4
MSTRG.5695 Avicennia marina HOM05D002036 ORTHO05D001913 3.9e-15 86.3 110 43.6
MSTRG.19112 Avicennia marina HOM05D002036 ORTHO05D001913 4.3e-14 82.8 100 44.0
MD04G1118500 Malus domestica HOM05D002036 ORTHO05D001913 3.1e-12 76.6 106 40.6
Oeu023869.2 Olea europaea HOM05D002036 ORTHO05D001913 3.1e-12 76.6 105 44.8
RcHm_v2.0_Chr3g0467721 Rosa chinensis HOM05D002036 ORTHO05D001913 1.2e-11 74.7 100 45.0
Oeu060059.1 Olea europaea HOM05D002036 ORTHO05D001913 2.0e-11 73.9 106 44.3
Prupe.6G247900 Prunus persica HOM05D002036 ORTHO05D001913 4.5e-11 72.8 107 40.2
Migut.J00378 Erythranthe guttata HOM05D002036 ORTHO05D001913 5.9e-11 72.4 142 35.9
SalBow3G1915 Salvia bowleyana HOM05D002036 ORTHO05D001913 7.7e-11 72.0 106 41.5
MD12G1134400 Malus domestica HOM05D002036 ORTHO05D001913 2.9e-10 70.1 100 43.0
FAN09G1592 Fragaria x ananassa HOM05D002036 ORTHO05D001913 3.8e-10 69.7 97 42.3
MSTRG.10276 Avicennia marina HOM05D002036 ORTHO05D001913 8.5e-10 68.6 105 38.1
FvH4_6g14620 Fragaria vesca HOM05D002036 ORTHO05D001913 1.1e-09 68.2 97 41.2
FAN05G4012 Fragaria x ananassa HOM05D002036 ORTHO05D001913 1.1e-09 68.2 97 42.3
FAN14G3656 Fragaria x ananassa HOM05D002036 ORTHO05D001913 1.1e-09 68.2 97 41.2
Ah.08g212270 Amaranthus hybridus HOM05D002036 ORTHO05D001913 1.9e-09 67.4 109 37.6
FAN02G2099 Fragaria x ananassa HOM05D002036 ORTHO05D001913 3.2e-09 66.6 97 41.2
Ah.08g212260 Amaranthus hybridus HOM05D002036 ORTHO05D001913 7.2e-09 65.5 135 33.3
CANSAT49G0001 Cannabis sativa HOM05D002036 ORTHO05D001913 1.2e-08 64.7 114 36.8
Dinv35653 Davidia involucrata HOM05D002036 ORTHO05D001913 2.1e-08 63.9 106 39.6
EL10Ac7g17299 Beta vulgaris HOM05D002036 ORTHO05D001913 1.4e-07 61.2 109 35.8
QL07p046595 Quercus lobata HOM05D002036 ORTHO05D001913 1.4e-07 61.2 98 36.7
AUR62040988 Chenopodium quinoa HOM05D002036 ORTHO05D001913 1.8e-07 60.8 109 33.9
Phvul.007G159500 Phaseolus vulgaris HOM05D002036 ORTHO05D001913 3.0e-07 60.1 104 37.5
Actinidia19752 Actinidia chinensis HOM05D002036 ORTHO05D001913 3.9e-07 59.7 106 36.8
Aqoxy4G03055 Aquilegia oxysepala HOM05D002036 ORTHO05D001913 3.9e-07 59.7 72 48.6
AUR62042966 Chenopodium quinoa HOM05D002036 ORTHO05D001913 3.9e-07 59.7 109 33.9
Hund24066 Selenicereus undatus HOM05D002036 ORTHO05D001913 3.9e-07 59.7 267 25.8
TAR157G0003 Trochodendron aralioides HOM05D002036 ORTHO05D001913 3.9e-07 59.7 99 39.4
Cpa.g.sc2422.1 Carica papaya HOM05D002036 ORTHO05D001913 5.1e-07 59.3 149 30.2
PSO206G0030 Papaver somniferum HOM05D002036 ORTHO05D001913 5.1e-07 59.3 70 51.4
PSO339G0404 Papaver somniferum HOM05D002036 ORTHO05D001913 5.1e-07 59.3 70 51.4
Phvul.001G171300 Phaseolus vulgaris HOM05D002036 ORTHO05D001913 5.1e-07 59.3 149 32.9
Atru.chr8.2482 Acer truncatum HOM05D002036 ORTHO05D001913 6.7e-07 58.9 97 38.1
CSS0022078 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 1.1e-06 58.2 97 38.1
Ca_09596_v3 Cicer arietinum L. HOM05D002036 ORTHO05D001913 1.5e-06 57.8 105 35.2
Lj1g0026714 Lotus japonicus HOM05D002036 ORTHO05D001913 1.5e-06 57.8 72 48.6
Cfa017446 Carpinus fangiana HOM05D002036 ORTHO05D001913 2.0e-06 57.4 106 34.0
CiPaw.10G141600 Carya illinoinensis HOM05D002036 ORTHO05D001913 2.0e-06 57.4 97 38.1
GSVIVG01025600001 Vitis vinifera HOM05D002036 ORTHO05D001913 2.0e-06 57.4 94 38.3
Ciclev10011022m.g Citrus clementina HOM05D002036 ORTHO05D001913 2.6e-06 57.0 168 27.4
Cc06_g03130 Coffea canephora HOM05D002036 ORTHO05D001913 4.4e-06 56.2 73 45.2
Dinv37219 Davidia involucrata HOM05D002036 ORTHO05D001913 5.7e-06 55.8 95 37.9
Glyma.13G133500 Glycine max HOM05D002036 ORTHO05D001913 5.7e-06 55.8 104 34.6
Nitab4.5_0002995g0030 Nicotiana tabacum HOM05D002036 ORTHO05D001913 5.7e-06 55.8 83 38.6
Nitab4.5_0010623g0020 Nicotiana tabacum HOM05D002036 ORTHO05D001913 5.7e-06 55.8 83 38.6
arahy.Tifrunner.gnm1.ann1.91Z2HD Arachis hypogaea HOM05D002036 ORTHO05D001913 7.4e-06 55.5 105 35.2
Manes.09G085700 Manihot esculenta HOM05D002036 ORTHO05D001913 7.4e-06 55.5 113 31.9
Haze_20717 Corylus avellana HOM05D002036 ORTHO05D001913 9.7e-06 55.1 106 33.0
Sabra06G0164600 Salix brachista HOM05D002036 ORTHO05D001913 9.7e-06 55.1 210 27.1


User provided reference genes

Program Settings