Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 3.2e-27 124.4 66 100.0
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.1e-19 99.4 66 77.3
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.4e-17 92.4 66 71.2
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.2e-13 79.3 66 66.7
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 4.5e-13 77.4 65 63.1
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 5.9e-13 77.0 66 62.1
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 5.9e-13 77.0 63 65.1
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 5.9e-13 77.0 67 65.7
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 5.9e-13 77.0 63 66.7
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.0e-12 76.3 66 63.6
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 1.3e-12 75.9 65 61.5
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 1.3e-12 75.9 67 64.2
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 2.3e-12 75.1 65 60.0
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 2.9e-12 74.7 67 65.7
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 6.6e-12 73.6 65 64.6
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 1.1e-11 72.8 59 62.7
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 1.9e-11 72.0 60 60.0
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 2.5e-11 71.6 67 59.7
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 3.3e-11 71.2 66 63.6
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 3.3e-11 71.2 66 63.6
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 4.3e-11 70.9 60 63.3
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 4.3e-11 70.9 65 61.5
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 4.3e-11 70.9 66 66.7
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 7.3e-11 70.1 65 60.0
Lalb_Chr19g0128561 Lupinus albus HOM05D005842 ORTHO05D007077 2.1e-10 68.6 66 63.6
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 2.8e-10 68.2 66 54.5
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 4.7e-10 67.4 66 59.1
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 4.7e-10 67.4 66 53.0
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 6.1e-10 67.0 66 56.1
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 8.0e-10 66.6 57 57.9
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 8.0e-10 66.6 61 60.7
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 1.8e-09 65.5 66 51.5
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 4.0e-09 64.3 63 54.0
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 5.2e-09 63.9 65 56.9
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 6.8e-09 63.5 55 61.8
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 6.8e-09 63.5 51 62.7
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 6.8e-09 63.5 51 62.7
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 6.8e-09 63.5 51 62.7
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 6.8e-09 63.5 51 62.7
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 6.8e-09 63.5 51 62.7
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 6.8e-09 63.5 51 62.7
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 6.8e-09 63.5 51 62.7
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 6.8e-09 63.5 51 62.7
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 6.8e-09 63.5 39 74.4
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 8.9e-09 63.2 63 55.6
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 1.2e-08 62.8 61 55.7
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 1.5e-08 62.4 60 58.3
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 1.5e-08 62.4 41 73.2
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 2.6e-08 61.6 64 54.7
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 3.4e-08 61.2 60 56.7
Lalb_Chr03g0036861 Lupinus albus HOM05D005842 ORTHO05D007077 4.4e-08 60.8 61 57.4
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 4.4e-08 60.8 66 54.5
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 4.4e-08 60.8 65 53.8
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 5.8e-08 60.5 64 53.1
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 5.8e-08 60.5 64 53.1
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 5.8e-08 60.5 40 70.0
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 9.8e-08 59.7 65 49.2
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.3e-07 59.3 63 54.0
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 1.7e-07 58.9 65 50.8
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 2.2e-07 58.5 64 48.4
MELO3C023065.2 Cucumis melo HOM05D005842 ORTHO05D007077 2.2e-07 58.5 60 55.0
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 2.9e-07 58.2 65 49.2
TPR.G23959 Trifolium pratense HOM05D005842 ORTHO05D007077 3.7e-07 57.8 61 52.5
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 4.9e-07 57.4 60 53.3
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 4.9e-07 57.4 64 51.6
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 4.9e-07 57.4 64 51.6
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 4.9e-07 57.4 65 52.3
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 4.9e-07 57.4 63 54.0
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 8.3e-07 56.6 60 53.3
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 8.3e-07 56.6 33 81.8
ClCG06G007420 Citrullus lanatus HOM05D005842 ORTHO05D007077 1.1e-06 56.2 69 47.8
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 1.1e-06 56.2 45 62.2
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 1.4e-06 55.8 63 52.4
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 1.4e-06 55.8 65 52.3
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 1.4e-06 55.8 65 47.7
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 1.9e-06 55.5 63 52.4
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 1.9e-06 55.5 63 52.4
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 2.4e-06 55.1 34 70.6
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 2.4e-06 55.1 87 43.7
Solyc12g097050.2 Solanum lycopersicum HOM05D005842 ORTHO05D007077 2.4e-06 55.1 61 49.2
Sopen12g032850 Solanum pennellii HOM05D005842 ORTHO05D007077 2.4e-06 55.1 61 49.2
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 3.2e-06 54.7 41 65.9
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 3.2e-06 54.7 65 50.8
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.2e-06 54.7 63 50.8
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 4.1e-06 54.3 41 65.9
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 4.1e-06 54.3 41 65.9
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 4.1e-06 54.3 41 65.9
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 4.1e-06 54.3 40 67.5
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 4.1e-06 54.3 41 65.9
Psat6g108960 Pisum sativum HOM05D005842 ORTHO05D007077 4.1e-06 54.3 47 63.8
PGSC0003DMG400008623 Solanum tuberosum HOM05D005842 ORTHO05D007077 4.1e-06 54.3 56 50.0
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 5.4e-06 53.9 45 60.0
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 5.4e-06 53.9 65 47.7
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 5.4e-06 53.9 65 47.7
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 7.0e-06 53.5 87 43.7
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 7.0e-06 53.5 41 63.4
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 9.2e-06 53.1 40 65.0
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 9.2e-06 53.1 63 50.8
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 9.2e-06 53.1 63 50.8
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 9.2e-06 53.1 63 50.8
TWI53G0373 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 9.2e-06 53.1 36 69.4


User provided reference genes

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