Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004122.1 Olea europaea HOM05D001810 ORTHO05D289734 5.5e-29 130.2 61 100.0
Oeu035091.1 Olea europaea HOM05D001810 ORTHO05D005662 1.1e-10 69.3 55 60.0
Oeu038371.1 Olea europaea HOM05D001810 ORTHO05D005662 2.6e-10 68.2 55 60.0
CANSAT21G0287 Cannabis sativa HOM05D001810 ORTHO05D005662 2.2e-09 65.1 55 56.4
CiPaw.01G091300 Carya illinoinensis HOM05D001810 ORTHO05D005662 2.8e-09 64.7 55 56.4
Migut.I01196 Erythranthe guttata HOM05D001810 ORTHO05D005662 3.7e-09 64.3 55 54.5
Eucgr.F04028 Eucalyptus grandis HOM05D001810 ORTHO05D005662 3.7e-09 64.3 55 52.7
GSVIVG01029543001 Vitis vinifera HOM05D001810 ORTHO05D005662 1.1e-08 62.8 55 54.5
PSO063G6510 Papaver somniferum HOM05D001810 ORTHO05D005662 1.4e-08 62.4 55 54.5
PSO170G1341 Papaver somniferum HOM05D001810 ORTHO05D005662 1.4e-08 62.4 55 54.5
Gohir.D10G002300 Gossypium hirsutum HOM05D001810 ORTHO05D005662 1.8e-08 62.0 55 54.5
Gorai.011G002700 Gossypium raimondii HOM05D001810 ORTHO05D005662 1.8e-08 62.0 55 54.5
PGR102G2479 Punica granatum HOM05D001810 ORTHO05D005662 1.8e-08 62.0 58 50.0
Cfa002156 Carpinus fangiana HOM05D001810 ORTHO05D005662 2.4e-08 61.6 55 52.7
MD09G1164900 Malus domestica HOM05D001810 ORTHO05D005662 2.4e-08 61.6 55 50.9
Gohir.A10G002300 Gossypium hirsutum HOM05D001810 ORTHO05D005662 3.1e-08 61.2 55 54.5
Lj4A856T32 Lonicera japonica HOM05D001810 ORTHO05D005662 3.1e-08 61.2 55 50.9
QL05p084562 Quercus lobata HOM05D001810 ORTHO05D005662 3.1e-08 61.2 55 52.7
QL05p084936 Quercus lobata HOM05D001810 ORTHO05D005662 3.1e-08 61.2 55 52.7
Atru.chr1.2655 Acer truncatum HOM05D001810 ORTHO05D005662 5.3e-08 60.5 55 49.1
MSTRG.10877 Avicennia marina HOM05D001810 ORTHO05D005662 5.3e-08 60.5 55 52.7
Potri.010G253200 Populus trichocarpa HOM05D001810 ORTHO05D005662 5.3e-08 60.5 55 52.7
SalBow6G2819 Salvia bowleyana HOM05D001810 ORTHO05D005662 5.3e-08 60.5 55 52.7
Cc04_g00180 Coffea canephora HOM05D001810 ORTHO05D005662 6.9e-08 60.1 55 50.9
Haze_16252 Corylus avellana HOM05D001810 ORTHO05D005662 6.9e-08 60.1 55 50.9
Manes.14G008000 Manihot esculenta HOM05D001810 ORTHO05D005662 6.9e-08 60.1 55 52.7
Thecc.06G057800 Theobroma cacao HOM05D001810 ORTHO05D005662 6.9e-08 60.1 55 52.7
Duzib192G0783 Durio zibethinus HOM05D001810 ORTHO05D005662 1.2e-07 59.3 55 50.9
MD17G1163300 Malus domestica HOM05D001810 ORTHO05D005662 1.5e-07 58.9 55 50.9
Dinv20338 Davidia involucrata HOM05D001810 ORTHO05D005662 2.0e-07 58.5 55 49.1
Sabra10G0197000 Salix brachista HOM05D001810 ORTHO05D005662 2.0e-07 58.5 55 49.1
Duzib235G1221 Durio zibethinus HOM05D001810 ORTHO05D005662 2.6e-07 58.2 55 52.7
Potri.008G005200 Populus trichocarpa HOM05D001810 ORTHO05D005662 3.4e-07 57.8 55 50.9
Prupe.3G022300 Prunus persica HOM05D001810 ORTHO05D005662 3.4e-07 57.8 55 47.3
arahy.Tifrunner.gnm1.ann1.02QZYL Arachis hypogaea HOM05D001810 ORTHO05D005662 4.5e-07 57.4 55 50.9
arahy.Tifrunner.gnm1.ann1.PFN72X Arachis hypogaea HOM05D001810 ORTHO05D005662 4.5e-07 57.4 55 50.9
Cpa.g.sc155.15 Carica papaya HOM05D001810 ORTHO05D005662 4.5e-07 57.4 55 50.9
FvH4_6g37020 Fragaria vesca HOM05D001810 ORTHO05D005662 4.5e-07 57.4 55 49.1
FAN02G3504 Fragaria x ananassa HOM05D001810 ORTHO05D005662 4.5e-07 57.4 55 49.1
FAN14G2951 Fragaria x ananassa HOM05D001810 ORTHO05D005662 4.5e-07 57.4 55 49.1
TWI12G1300 Tripterygium wilfordii HOM05D001810 ORTHO05D005662 4.5e-07 57.4 55 50.9
Hma1.2p1_0517F.1_g170790 Hydrangea macrophylla HOM05D001810 ORTHO05D005662 5.9e-07 57.0 55 50.9
RcHm_v2.0_Chr2g0149571 Rosa chinensis HOM05D001810 ORTHO05D005662 1.0e-06 56.2 55 47.3
FAN05G4051 Fragaria x ananassa HOM05D001810 ORTHO05D005662 1.3e-06 55.8 55 47.3
FAN09G1915 Fragaria x ananassa HOM05D001810 ORTHO05D005662 1.3e-06 55.8 55 47.3
TAR383G1089 Trochodendron aralioides HOM05D001810 ORTHO05D005662 1.3e-06 55.8 55 49.1
Actinidia31125 Actinidia chinensis HOM05D001810 ORTHO05D005662 1.7e-06 55.5 55 49.1
Actinidia00646 Actinidia chinensis HOM05D001810 ORTHO05D005662 2.2e-06 55.1 55 47.3
CSS0020822 Camellia sinensis var. sinensis HOM05D001810 ORTHO05D005662 2.2e-06 55.1 55 47.3
Ciclev10031631m.g Citrus clementina HOM05D001810 ORTHO05D005662 2.2e-06 55.1 55 45.5
HanXRQChr10g0311191 Helianthus annuus HOM05D001810 ORTHO05D005662 2.2e-06 55.1 55 45.5
Lsat_1_v5_gn_5_137241 Lactuca sativa HOM05D001810 ORTHO05D005662 2.2e-06 55.1 55 45.5
SGA_v2.0_scaffold71G23990 Striga asiatica HOM05D001810 ORTHO05D005662 2.9e-06 54.7 55 47.3
PGSC0003DMG400005931 Solanum tuberosum HOM05D001810 ORTHO05D005662 3.8e-06 54.3 59 52.5
TAR626G1482 Trochodendron aralioides HOM05D001810 ORTHO05D005662 6.5e-06 53.5 55 47.3
HanXRQChr12g0359701 Helianthus annuus HOM05D001810 ORTHO05D005662 8.5e-06 53.1 56 46.4
MBI13_g01741_MAGBIO Magnolia biondii HOM05D001810 ORTHO05D005662 8.5e-06 53.1 55 45.5


User provided reference genes

Program Settings