Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002862.1 Olea europaea HOM05D005381 ORTHO05D006674 3.7e-263 911.0 451 100.0
SalBow3G2811 Salvia bowleyana HOM05D005381 ORTHO05D006674 9.5e-171 604.0 473 66.0
SGA_v2.0_scaffold97G29223 Striga asiatica HOM05D005381 ORTHO05D006674 3.8e-167 592.0 470 65.7
CiPaw.14G080100 Carya illinoinensis HOM05D005381 ORTHO05D006674 3.3e-163 578.9 488 62.3
GSVIVG01025178001 Vitis vinifera HOM05D005381 ORTHO05D006674 3.6e-162 575.5 468 63.0
Atru.chr3.3639 Acer truncatum HOM05D005381 ORTHO05D006674 1.8e-161 573.2 492 60.4
Peaxi162Scf00270g00915 Petunia axillaris HOM05D005381 ORTHO05D006674 1.5e-160 570.1 468 64.1
Hma1.2p1_1031F.1_g249980 Hydrangea macrophylla HOM05D005381 ORTHO05D006674 2.6e-160 569.3 450 63.8
Lsat_1_v5_gn_6_46081 Lactuca sativa HOM05D005381 ORTHO05D006674 4.4e-160 568.5 497 59.2
Cc01_g11210 Coffea canephora HOM05D005381 ORTHO05D006674 9.9e-160 567.4 477 60.6
Nitab4.5_0000650g0150 Nicotiana tabacum HOM05D005381 ORTHO05D006674 1.3e-159 567.0 446 64.8
Sopen11g028060 Solanum pennellii HOM05D005381 ORTHO05D006674 1.9e-158 563.1 466 62.2
Nitab4.5_0003701g0010 Nicotiana tabacum HOM05D005381 ORTHO05D006674 4.2e-158 562.0 445 64.0
Solyc11g069340.2 Solanum lycopersicum HOM05D005381 ORTHO05D006674 7.1e-158 561.2 461 62.7
Manes.04G021900 Manihot esculenta HOM05D005381 ORTHO05D006674 1.6e-157 560.1 491 61.1
Duzib168G0972 Durio zibethinus HOM05D005381 ORTHO05D006674 8.7e-156 554.3 481 60.3
vmacro03193 Vaccinium macrocarpon HOM05D005381 ORTHO05D006674 8.7e-156 554.3 467 63.0
Gohir.A03G034400 Gossypium hirsutum HOM05D005381 ORTHO05D006674 3.3e-155 552.4 491 60.1
Lj2A1029T35 Lonicera japonica HOM05D005381 ORTHO05D006674 5.6e-155 551.6 498 59.2
COL.COLO4_18342 Corchorus olitorius HOM05D005381 ORTHO05D006674 7.3e-155 551.2 489 60.9
CSS0008106 Camellia sinensis var. sinensis HOM05D005381 ORTHO05D006674 2.8e-154 549.3 483 60.2
Gorai.003G141000 Gossypium raimondii HOM05D005381 ORTHO05D006674 2.8e-154 549.3 491 60.1
Nn2g10776 Nelumbo nucifera HOM05D005381 ORTHO05D006674 3.6e-154 548.9 477 58.3
Sc06g0010080 Simmondsia chinensis HOM05D005381 ORTHO05D006674 3.6e-154 548.9 476 58.8
CSS0041314 Camellia sinensis var. sinensis HOM05D005381 ORTHO05D006674 4.8e-154 548.5 483 60.0
Migut.D02217 Erythranthe guttata HOM05D005381 ORTHO05D006674 4.8e-154 548.5 471 61.6
Gohir.D03G133900 Gossypium hirsutum HOM05D005381 ORTHO05D006674 4.0e-153 545.4 492 59.6
TAR636G1844 Trochodendron aralioides HOM05D005381 ORTHO05D006674 4.0e-153 545.4 463 60.3
TAR636G1890 Trochodendron aralioides HOM05D005381 ORTHO05D006674 4.0e-153 545.4 463 60.3
DCAR_018815 Daucus carota HOM05D005381 ORTHO05D006674 7.6e-152 541.2 441 59.9
Potri.009G013000 Populus trichocarpa HOM05D005381 ORTHO05D006674 7.6e-152 541.2 448 62.1
Prupe.6G100600 Prunus persica HOM05D005381 ORTHO05D006674 1.7e-151 540.0 474 59.5
Sabra09G0008300 Salix brachista HOM05D005381 ORTHO05D006674 2.2e-151 539.7 456 61.0
CANSAT54G1801 Cannabis sativa HOM05D005381 ORTHO05D006674 8.4e-151 537.7 499 57.3
QL01p022359 Quercus lobata HOM05D005381 ORTHO05D006674 4.2e-150 535.4 507 56.2
CAN.G631.20 Capsicum annuum HOM05D005381 ORTHO05D006674 7.1e-150 534.6 480 58.8
Glyma.12G068100 Glycine max HOM05D005381 ORTHO05D006674 4.6e-149 531.9 466 59.2
Phvul.011G078600 Phaseolus vulgaris HOM05D005381 ORTHO05D006674 7.9e-149 531.2 451 59.9
RcHm_v2.0_Chr5g0059591 Rosa chinensis HOM05D005381 ORTHO05D006674 1.0e-148 530.8 471 58.8
Glyma.11G147200 Glycine max HOM05D005381 ORTHO05D006674 2.3e-148 529.6 465 59.1
ClCG02G021120 Citrullus lanatus HOM05D005381 ORTHO05D006674 3.9e-148 528.9 473 57.1
TWI79G1139 Tripterygium wilfordii HOM05D005381 ORTHO05D006674 5.1e-148 528.5 489 57.9
Aqoxy5G04136 Aquilegia oxysepala HOM05D005381 ORTHO05D006674 6.7e-148 528.1 446 59.9
Haze_23841 Corylus avellana HOM05D005381 ORTHO05D006674 8.7e-148 527.7 520 55.6
FvH4_3g32530 Fragaria vesca HOM05D005381 ORTHO05D006674 2.5e-147 526.2 470 58.5
Thecc.09G339700 Theobroma cacao HOM05D005381 ORTHO05D006674 2.5e-147 526.2 494 58.9
MBI10_g13354_MAGBIO Magnolia biondii HOM05D005381 ORTHO05D006674 3.3e-147 525.8 480 56.5
MELO3C025769.2 Cucumis melo HOM05D005381 ORTHO05D006674 4.3e-147 525.4 474 56.8
MD11G1134700 Malus domestica HOM05D005381 ORTHO05D006674 4.3e-147 525.4 472 58.5
Cpa.g.sc898.4 Carica papaya HOM05D005381 ORTHO05D006674 5.6e-147 525.0 501 55.9
Ciclev10027798m.g Citrus clementina HOM05D005381 ORTHO05D006674 1.3e-146 523.9 496 58.5
HanXRQChr13g0403491 Helianthus annuus HOM05D005381 ORTHO05D006674 2.1e-146 523.1 470 57.7
Aqoxy1G01625 Aquilegia oxysepala HOM05D005381 ORTHO05D006674 1.1e-145 520.8 445 59.3
Sed0021600 Sechium edule HOM05D005381 ORTHO05D006674 1.4e-145 520.4 483 55.1
CsaV3_6G013880 Cucumis sativus L. HOM05D005381 ORTHO05D006674 3.1e-145 519.2 475 55.8
Rhsim13G0093900 Rhododendron simsii HOM05D005381 ORTHO05D006674 4.0e-145 518.8 546 53.8
VMungo1127G2043 Vigna mungo HOM05D005381 ORTHO05D006674 4.0e-145 518.8 460 59.1
Medtr4g059550 Medicago truncatula HOM05D005381 ORTHO05D006674 5.3e-145 518.5 464 58.0
PSO063G6738 Papaver somniferum HOM05D005381 ORTHO05D006674 5.3e-145 518.5 452 57.7
PSO339G1100 Papaver somniferum HOM05D005381 ORTHO05D006674 1.2e-144 517.3 451 57.4
ECA233G6150 Erigeron canadensis HOM05D005381 ORTHO05D006674 3.4e-144 515.8 466 56.2
arahy.Tifrunner.gnm1.ann1.I533MD Arachis hypogaea HOM05D005381 ORTHO05D006674 4.5e-144 515.4 484 56.8
Ca_05253_v3 Cicer arietinum L. HOM05D005381 ORTHO05D006674 9.9e-144 514.2 451 59.0
Psat7g224200 Pisum sativum HOM05D005381 ORTHO05D006674 1.1e-142 510.8 464 56.9
Lalb_Chr01g0004271 Lupinus albus HOM05D005381 ORTHO05D006674 5.5e-142 508.4 449 58.6
TPR.G15543 Trifolium pratense HOM05D005381 ORTHO05D006674 5.5e-142 508.4 423 60.3
MD03G1116700 Malus domestica HOM05D005381 ORTHO05D006674 2.7e-141 506.1 461 58.4
arahy.Tifrunner.gnm1.ann1.7B6ACI Arachis hypogaea HOM05D005381 ORTHO05D006674 1.3e-140 503.8 507 54.4
AUR62024992 Chenopodium quinoa HOM05D005381 ORTHO05D006674 2.5e-139 499.6 460 55.2
FAN21G0488 Fragaria x ananassa HOM05D005381 ORTHO05D006674 2.5e-139 499.6 470 57.0
Aa31LG5G7770 Aethionema arabicum HOM05D005381 ORTHO05D006674 3.3e-139 499.2 441 56.0
unitig_899.g14913 Utricularia gibba HOM05D005381 ORTHO05D006674 3.3e-139 499.2 491 56.2
THA.LOC104800610 Tarenaya hassleriana HOM05D005381 ORTHO05D006674 5.6e-139 498.4 474 54.6
Lj3g0020359 Lotus japonicus HOM05D005381 ORTHO05D006674 2.1e-138 496.5 464 57.5
Dinv32755 Davidia involucrata HOM05D005381 ORTHO05D006674 4.0e-137 492.3 373 66.2
FAN11G2629 Fragaria x ananassa HOM05D005381 ORTHO05D006674 4.0e-137 492.3 475 56.2
FAN16G3073 Fragaria x ananassa HOM05D005381 ORTHO05D006674 5.3e-137 491.9 472 57.0
FAN25G3738 Fragaria x ananassa HOM05D005381 ORTHO05D006674 6.5e-135 485.0 478 54.8
BolC4t23787H Brassica oleracea HOM05D005381 ORTHO05D006674 3.2e-134 482.6 439 54.9
C04p22930 Brassica napus HOM05D005381 ORTHO05D006674 5.5e-134 481.9 439 54.7
Sp4g11270 Schrenkiella parvula HOM05D005381 ORTHO05D006674 3.5e-133 479.2 444 55.2
BraA07t29607Z Brassica rapa HOM05D005381 ORTHO05D006674 5.1e-132 475.3 424 57.1
A07p19020 Brassica napus HOM05D005381 ORTHO05D006674 1.5e-131 473.8 424 56.8
AT2G28450 Arabidopsis thaliana HOM05D005381 ORTHO05D006674 3.3e-131 472.6 442 54.5
ATR0115G037 Amborella trichopoda HOM05D005381 ORTHO05D006674 6.3e-130 468.4 482 51.7
Os04g0105000 Oryza sativa ssp. japonica HOM05D005381 ORTHO05D006674 8.2e-130 468.0 476 51.5
AL4G21570 Arabidopsis lyrata HOM05D005381 ORTHO05D006674 1.3e-127 460.7 441 52.8
CARHR121390 Cardamine hirsuta HOM05D005381 ORTHO05D006674 9.4e-126 454.5 441 53.3
Carub.0004s0939 Capsella rubella HOM05D005381 ORTHO05D006674 3.6e-125 452.6 439 51.9
Eucgr.J00934 Eucalyptus grandis HOM05D005381 ORTHO05D006674 1.0e-124 451.1 367 61.0
Zm00001eb418880 Zea mays HOM05D005381 ORTHO05D006674 1.8e-124 450.3 467 51.0
Zm00001eb089580 Zea mays HOM05D005381 ORTHO05D006674 3.3e-123 446.0 486 49.0
PGR119G0002 Punica granatum HOM05D005381 ORTHO05D006674 2.2e-122 443.4 456 52.2
Ah.01g002830 Amaranthus hybridus HOM05D005381 ORTHO05D006674 3.1e-121 439.5 460 51.3
SEGI_24136 Sequoiadendron giganteum HOM05D005381 ORTHO05D006674 3.7e-114 416.0 457 46.2
EL10Ac9g22502 Beta vulgaris HOM05D005381 ORTHO05D006674 5.3e-113 412.1 402 54.5
Thhalv10016347m.g Eutrema salsugineum HOM05D005381 ORTHO05D006674 5.9e-112 408.7 343 57.1
Hma1.2p1_1031F.1_g249990 Hydrangea macrophylla HOM05D005381 ORTHO05D006674 2.4e-105 386.7 246 74.0
Lalb_Chr19g0137331 Lupinus albus HOM05D005381 ORTHO05D006674 7.7e-104 381.7 387 52.5
AUR62039627 Chenopodium quinoa HOM05D005381 ORTHO05D006674 1.7e-98 364.0 309 58.3
HPP92_012655 Vanilla planifolia HOM05D005381 ORTHO05D006674 1.2e-96 357.8 321 56.4
Mapoly0078s0012 Marchantia polymorpha HOM05D005381 ORTHO05D006674 5.9e-96 355.5 464 40.7
Pp3c10_16370 Physcomitrium patens HOM05D005381 ORTHO05D006674 5.0e-95 352.4 482 41.1
AagrBONN_evm.TU.Sc2ySwM_228.3233 Anthoceros agrestis HOM05D005381 ORTHO05D006674 9.8e-91 338.2 448 43.1
BcaC01g02792 Brassica carinata HOM05D005381 ORTHO05D006674 1.8e-81 307.4 227 61.2
BolC3t18293H Brassica oleracea HOM05D005381 ORTHO05D006674 4.9e-74 282.7 227 56.8
BolC3t18296H Brassica oleracea HOM05D005381 ORTHO05D006674 1.6e-72 277.7 229 56.3
SMO340G0204 Selaginella moellendorffii HOM05D005381 ORTHO05D006674 2.3e-71 273.9 325 42.5
BcaC01g02790 Brassica carinata HOM05D005381 ORTHO05D006674 8.6e-71 271.9 227 55.5
BcaC01g02789 Brassica carinata HOM05D005381 ORTHO05D006674 2.1e-69 267.3 227 54.6
SMO184G0011 Selaginella moellendorffii HOM05D005381 ORTHO05D006674 4.7e-69 266.2 327 41.6
C03p60390 Brassica napus HOM05D005381 ORTHO05D006674 1.6e-64 251.1 196 57.7
CDE08G1578 Ceratophyllum demersum HOM05D005381 ORTHO05D006674 3.3e-62 243.4 166 66.3
Actinidia07131 Actinidia chinensis HOM05D005381 ORTHO05D006674 1.9e-57 227.6 238 55.9
BcaC02g10959 Brassica carinata HOM05D005381 ORTHO05D001775 2.4e-41 174.1 225 46.2
Rhsim13G0156400 Rhododendron simsii HOM05D005381 ORTHO05D006674 6.7e-31 139.4 109 64.2
Actinidia24095 Actinidia chinensis HOM05D005381 ORTHO05D006674 9.3e-25 119.0 164 45.7
CBR_g8738 Chara braunii HOM05D001539 ORTHO05D000937 1.0e-23 115.5 103 50.5
Actinidia07132 Actinidia chinensis HOM05D005381 ORTHO05D006674 3.3e-22 110.5 80 63.8
C03p60310 Brassica napus HOM05D005381 ORTHO05D006674 1.3e-15 88.6 76 52.6
CDE08G1592 Ceratophyllum demersum HOM05D000290 ORTHO05D007415 2.3e-15 87.8 182 31.9
CBR_g8740 Chara braunii HOM05D005381 ORTHO05D006674 2.3e-15 87.8 161 36.0
Cre02.g101950 Chlamydomonas reinhardtii HOM05D005381 ORTHO05D006674 8.7e-15 85.9 97 41.2
CBR_g8736 Chara braunii HOM05D005381 ORTHO05D006674 2.4e-12 77.8 100 39.0
CDE02G3164 Ceratophyllum demersum HOM05D005381 ORTHO05D006674 5.3e-12 76.6 70 52.9
Lsat_1_v5_gn_6_46101 Lactuca sativa HOM05D005381 ORTHO05D006674 1.7e-10 71.6 108 40.7
SHI24573 Sapria himalayana HOM05D005381 ORTHO05D006674 7.2e-09 66.2 87 42.5
C03p60360 Brassica napus HOM05D005381 ORTHO05D006674 1.5e-06 58.5 46 56.5
BolC3t18299H Brassica oleracea HOM05D005381 ORTHO05D006674 1.5e-06 58.5 46 56.5


User provided reference genes

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