Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 3.9e-72 274.6 134 100.0
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 1.5e-66 256.1 134 93.3
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 2.5e-58 228.8 134 82.1
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 3.6e-57 224.9 134 81.3
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 2.2e-54 215.7 134 79.9
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 4.8e-54 214.5 132 80.3
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 8.3e-54 213.8 134 74.6
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 4.1e-53 211.5 134 77.6
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.7e-52 208.8 138 76.1
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.7e-52 208.8 138 76.1
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 5.9e-52 207.6 132 75.8
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.0e-51 206.8 132 75.8
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 2.9e-51 205.3 131 74.8
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.9e-50 202.6 133 73.7
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 1.9e-50 202.6 132 72.0
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 7.2e-50 200.7 132 72.7
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 9.4e-50 200.3 131 72.5
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 9.4e-50 200.3 132 72.7
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 1.6e-49 199.5 132 74.2
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 4.0e-48 194.9 139 67.6
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 6.8e-48 194.1 132 72.0
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 1.5e-47 193.0 137 72.3
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 2.6e-47 192.2 136 72.1
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 2.6e-47 192.2 135 71.1
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 4.4e-47 191.4 134 70.9
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 7.5e-47 190.7 134 70.1
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 2.2e-46 189.1 138 68.8
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 3.7e-46 188.3 136 70.6
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 1.1e-45 186.8 135 71.1
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 1.8e-45 186.0 134 67.2
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 1.8e-45 186.0 104 79.8
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 2.4e-45 185.7 135 68.9
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 2.4e-45 185.7 135 68.9
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 3.1e-45 185.3 135 68.9
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 3.1e-45 185.3 134 70.1
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.1e-45 184.9 134 69.4
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 7.0e-45 184.1 143 66.4
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 7.0e-45 184.1 143 66.4
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 7.0e-45 184.1 137 70.1
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 7.0e-45 184.1 137 70.1
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 9.1e-45 183.7 134 69.4
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 1.2e-44 183.3 143 65.7
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 1.2e-44 183.3 134 69.4
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 2.0e-44 182.6 135 67.4
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 2.0e-44 182.6 143 65.7
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 2.0e-44 182.6 143 65.7
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 2.7e-44 182.2 135 69.6
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 2.7e-44 182.2 135 68.1
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 2.7e-44 182.2 135 67.4
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 2.7e-44 182.2 131 67.2
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 4.5e-44 181.4 133 67.7
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 1.3e-43 179.9 146 65.1
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 1.7e-43 179.5 136 67.6
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 1.7e-43 179.5 141 67.4
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 2.9e-43 178.7 136 68.4
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 3.8e-43 178.3 99 83.8
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 3.8e-43 178.3 148 63.5
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 3.8e-43 178.3 132 64.4
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 5.0e-43 177.9 146 62.3
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 5.0e-43 177.9 144 63.9
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 5.0e-43 177.9 144 63.2
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 5.0e-43 177.9 144 63.9
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 5.0e-43 177.9 144 63.9
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 5.0e-43 177.9 144 63.2
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 6.6e-43 177.6 139 66.2
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 6.6e-43 177.6 136 66.9
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 8.6e-43 177.2 141 67.4
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 1.5e-42 176.4 145 63.4
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 2.5e-42 175.6 149 63.1
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 2.5e-42 175.6 135 66.7
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 5.6e-42 174.5 148 60.1
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 9.5e-42 173.7 136 67.6
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 9.5e-42 173.7 102 75.5
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 1.2e-41 173.3 140 64.3
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 1.6e-41 172.9 147 59.9
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 2.8e-41 172.2 143 62.9
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 3.6e-41 171.8 145 60.7
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 3.6e-41 171.8 143 62.2
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 3.6e-41 171.8 134 64.9
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 4.7e-41 171.4 139 66.2
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 8.0e-41 170.6 99 79.8
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 1.0e-40 170.2 124 65.3
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.0e-40 170.2 112 73.2
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 3.0e-40 168.7 144 62.5
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 3.0e-40 168.7 135 63.0
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 4.0e-40 168.3 122 65.6
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 5.2e-40 167.9 139 65.5
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 6.8e-40 167.5 136 61.8
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 6.8e-40 167.5 136 61.8
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 8.9e-40 167.2 95 80.0
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 1.5e-39 166.4 99 77.8
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 1.5e-39 166.4 138 62.3
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 4.4e-39 164.9 136 64.0
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 7.5e-39 164.1 136 64.0
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 9.8e-39 163.7 134 61.9
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 9.8e-39 163.7 134 61.9
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 9.8e-39 163.7 108 68.5
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 1.3e-38 163.3 137 63.5
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 8.3e-38 160.6 99 77.8
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 1.8e-37 159.5 138 60.9
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 2.0e-36 156.0 132 61.4
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 2.7e-36 155.6 98 73.5
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 1.1e-34 150.2 99 70.7
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 7.3e-34 147.5 140 57.1
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 7.3e-34 147.5 140 57.1
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 1.2e-33 146.7 96 70.8
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.6e-33 146.4 139 55.4
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.5e-31 139.8 104 68.3
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 4.4e-31 138.3 100 61.0
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 4.4e-31 138.3 111 59.5
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 5.8e-31 137.9 98 63.3
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.3e-30 136.7 111 55.0
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 3.0e-27 125.6 74 85.1
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 8.6e-27 124.0 98 56.1
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 5.6e-26 121.3 108 52.8
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 2.1e-25 119.4 102 53.9
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 2.1e-25 119.4 108 53.7
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 2.8e-25 119.0 96 54.2
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 8.1e-25 117.5 76 75.0
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 3.0e-19 99.0 102 46.1
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 5.1e-19 98.2 50 82.0
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 5.6e-18 94.7 94 44.7
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 5.6e-18 94.7 58 81.0
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.1e-13 78.6 74 55.4
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 6.0e-12 74.7 75 56.0
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 1.1e-10 70.5 58 63.8
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 2.4e-08 62.8 55 54.5


User provided reference genes

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