Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001107.1 Olea europaea HOM05D006680 ORTHO05D008206 3.5e-56 221.5 120 100.0
Oeu063359.1 Olea europaea HOM05D006680 ORTHO05D008206 1.2e-51 206.5 120 93.3
Migut.G00148 Erythranthe guttata HOM05D006680 ORTHO05D008206 1.1e-49 199.9 120 88.3
MSTRG.3906 Avicennia marina HOM05D006680 ORTHO05D008206 2.0e-46 189.1 120 84.2
Cc03_g01760 Coffea canephora HOM05D006680 ORTHO05D008206 2.5e-46 188.7 120 81.7
Nitab4.5_0003466g0010 Nicotiana tabacum HOM05D006680 ORTHO05D008206 8.2e-45 183.7 120 78.3
Nitab4.5_0002761g0070 Nicotiana tabacum HOM05D006680 ORTHO05D008206 1.1e-44 183.3 121 78.5
SGA_v2.0_scaffold67G22622 Striga asiatica HOM05D006680 ORTHO05D008206 2.4e-44 182.2 120 79.2
Peaxi162Scf00246g00103 Petunia axillaris HOM05D006680 ORTHO05D008206 6.9e-44 180.6 117 80.3
Peaxi162Scf00646g00027 Petunia axillaris HOM05D006680 ORTHO05D008206 6.9e-44 180.6 120 78.3
CAN.G129.31 Capsicum annuum HOM05D006680 ORTHO05D008206 1.2e-43 179.9 120 75.8
Ciclev10006049m.g Citrus clementina HOM05D006680 ORTHO05D008206 1.5e-43 179.5 121 79.3
Sopen01g028370 Solanum pennellii HOM05D006680 ORTHO05D008206 3.4e-43 178.3 120 74.2
ClCG00G005610 Citrullus lanatus HOM05D006680 ORTHO05D008206 7.7e-43 177.2 120 76.7
Dinv29759 Davidia involucrata HOM05D006680 ORTHO05D008206 7.7e-43 177.2 111 82.9
Solyc12g099500.2 Solanum lycopersicum HOM05D006680 ORTHO05D008206 7.7e-43 177.2 116 76.7
Sopen12g034170 Solanum pennellii HOM05D006680 ORTHO05D008206 7.7e-43 177.2 116 76.7
CiPaw.01G147500 Carya illinoinensis HOM05D006680 ORTHO05D008206 1.0e-42 176.8 120 75.8
Atru.chr4.2870 Acer truncatum HOM05D006680 ORTHO05D008206 3.8e-42 174.9 122 76.2
CiPaw.02G082300 Carya illinoinensis HOM05D006680 ORTHO05D008206 5.0e-42 174.5 120 74.2
PGSC0003DMG400011317 Solanum tuberosum HOM05D006680 ORTHO05D008206 5.0e-42 174.5 120 71.7
CSS0014864 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 6.5e-42 174.1 121 77.7
Cpa.g.sc16.184 Carica papaya HOM05D006680 ORTHO05D008206 8.5e-42 173.7 124 75.8
QL06p009590 Quercus lobata HOM05D006680 ORTHO05D008206 1.1e-41 173.3 119 74.8
CSS0010580 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 1.9e-41 172.6 121 77.7
Manes.15G011600 Manihot esculenta HOM05D006680 ORTHO05D008206 4.2e-41 171.4 123 76.4
MD13G1167200 Malus domestica HOM05D006680 ORTHO05D008206 5.5e-41 171.0 122 76.2
Sabra10G0008200 Salix brachista HOM05D006680 ORTHO05D008206 7.2e-41 170.6 116 76.7
PGSC0003DMG400004705 Solanum tuberosum HOM05D006680 ORTHO05D008206 7.2e-41 170.6 117 75.2
Thecc.04G286300 Theobroma cacao HOM05D006680 ORTHO05D008206 3.6e-40 168.3 117 76.1
Manes.03G196700 Manihot esculenta HOM05D006680 ORTHO05D008206 7.9e-40 167.2 119 75.6
TWI09G0327 Tripterygium wilfordii HOM05D006680 ORTHO05D008206 1.4e-39 166.4 118 72.9
DCAR_027070 Daucus carota HOM05D006680 ORTHO05D008206 1.8e-39 166.0 116 74.1
Lsat_1_v5_gn_6_95660 Lactuca sativa HOM05D006680 ORTHO05D008206 3.0e-39 165.2 120 72.5
Prupe.1G134500 Prunus persica HOM05D006680 ORTHO05D008206 1.1e-38 163.3 114 76.3
CAN.G484.39 Capsicum annuum HOM05D006680 ORTHO05D008206 2.6e-38 162.2 118 72.0
Gohir.A10G164900 Gossypium hirsutum HOM05D006680 ORTHO05D008206 2.6e-38 162.2 111 76.6
Gohir.D10G171100 Gossypium hirsutum HOM05D006680 ORTHO05D008206 2.6e-38 162.2 111 76.6
Gorai.011G191100 Gossypium raimondii HOM05D006680 ORTHO05D008206 2.6e-38 162.2 111 76.6
RcHm_v2.0_Chr4g0422811 Rosa chinensis HOM05D006680 ORTHO05D008206 3.3e-38 161.8 115 77.4
Hma1.2p1_1185F.1_g265000 Hydrangea macrophylla HOM05D006680 ORTHO05D008206 4.4e-38 161.4 120 72.5
THA.LOC104818922 Tarenaya hassleriana HOM05D006680 ORTHO05D008206 7.4e-38 160.6 112 78.6
A03p34950 Brassica napus HOM05D006680 ORTHO05D008206 9.7e-38 160.2 111 78.4
C03p42530 Brassica napus HOM05D006680 ORTHO05D008206 9.7e-38 160.2 111 78.4
BolC3t16523H Brassica oleracea HOM05D006680 ORTHO05D008206 9.7e-38 160.2 111 78.4
BraA03t12675Z Brassica rapa HOM05D006680 ORTHO05D008206 9.7e-38 160.2 111 78.4
BraA05t22848Z Brassica rapa HOM05D006680 ORTHO05D008206 1.7e-37 159.5 111 77.5
Potri.010G013100 Populus trichocarpa HOM05D006680 ORTHO05D008206 1.7e-37 159.5 112 74.1
Potri.008G221000 Populus trichocarpa HOM05D006680 ORTHO05D008206 2.2e-37 159.1 112 74.1
Gohir.D09G239200 Gossypium hirsutum HOM05D006680 ORTHO05D008206 2.8e-37 158.7 121 70.2
Gorai.006G261900 Gossypium raimondii HOM05D006680 ORTHO05D008206 2.8e-37 158.7 121 70.2
FAN07G2082 Fragaria x ananassa HOM05D006680 ORTHO05D008206 3.7e-37 158.3 115 73.9
FAN12G3601 Fragaria x ananassa HOM05D006680 ORTHO05D008206 3.7e-37 158.3 115 73.9
FAN17G1034 Fragaria x ananassa HOM05D006680 ORTHO05D008206 3.7e-37 158.3 115 73.9
Gohir.A09G238300 Gossypium hirsutum HOM05D006680 ORTHO05D008206 3.7e-37 158.3 121 70.2
ECA240G4018 Erigeron canadensis HOM05D006680 ORTHO05D008206 4.8e-37 157.9 126 65.9
FvH4_4g18340 Fragaria vesca HOM05D006680 ORTHO05D008206 8.2e-37 157.1 115 73.0
BcaC05g29822 Brassica carinata HOM05D006680 ORTHO05D008206 1.4e-36 156.4 112 78.6
BolC5t34701H Brassica oleracea HOM05D006680 ORTHO05D008206 1.4e-36 156.4 112 78.6
VMungo1215G2846 Vigna mungo HOM05D006680 ORTHO05D008206 1.4e-36 156.4 106 75.5
FAN12G3976 Fragaria x ananassa HOM05D006680 ORTHO05D008206 1.8e-36 156.0 114 73.7
Sc19g0005290 Simmondsia chinensis HOM05D006680 ORTHO05D008206 1.8e-36 156.0 121 70.2
Sc19g0005370 Simmondsia chinensis HOM05D006680 ORTHO05D008206 1.8e-36 156.0 121 70.2
A05p41250 Brassica napus HOM05D006680 ORTHO05D008206 2.4e-36 155.6 111 76.6
DCAR_002469 Daucus carota HOM05D006680 ORTHO05D008206 2.4e-36 155.6 118 67.8
Ca_21488_v3 Cicer arietinum L. HOM05D006680 ORTHO05D008206 4.1e-36 154.8 119 71.4
Duzib151G0306 Durio zibethinus HOM05D006680 ORTHO05D008206 5.3e-36 154.5 112 76.8
HanXRQChr13g0419971 Helianthus annuus HOM05D006680 ORTHO05D008206 5.3e-36 154.5 117 69.2
Duzib212G0294 Durio zibethinus HOM05D006680 ORTHO05D008206 7.0e-36 154.1 122 71.3
Lalb_Chr13g0303561 Lupinus albus HOM05D006680 ORTHO05D008206 9.1e-36 153.7 116 69.8
Lalb_Chr07g0177791 Lupinus albus HOM05D006680 ORTHO05D008206 2.6e-35 152.1 116 69.8
Nn4g25792 Nelumbo nucifera HOM05D006680 ORTHO05D008206 7.7e-35 150.6 120 68.3
Carub.0003s0642 Capsella rubella HOM05D006680 ORTHO05D008206 1.7e-34 149.4 98 79.6
Aqoxy2G02951 Aquilegia oxysepala HOM05D006680 ORTHO05D008206 2.2e-34 149.1 118 67.8
MBI19_g25353_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 2.2e-34 149.1 121 67.8
TAR370G0002 Trochodendron aralioides HOM05D006680 ORTHO05D008206 2.2e-34 149.1 119 68.9
Ah.08g214570 Amaranthus hybridus HOM05D006680 ORTHO05D008206 2.9e-34 148.7 121 68.6
Sed0015603 Sechium edule HOM05D006680 ORTHO05D008206 6.5e-34 147.5 120 63.3
Thhalv10021931m.g Eutrema salsugineum HOM05D006680 ORTHO05D008206 1.1e-33 146.7 100 76.0
Lj4g0016566 Lotus japonicus HOM05D006680 ORTHO05D008206 1.1e-33 146.7 91 83.5
CANSAT78G1139 Cannabis sativa HOM05D006680 ORTHO05D008206 1.4e-33 146.4 96 78.1
AUR62040379 Chenopodium quinoa HOM05D006680 ORTHO05D008206 1.4e-33 146.4 121 66.1
CARHR081510 Cardamine hirsuta HOM05D006680 ORTHO05D008206 3.2e-33 145.2 99 76.8
AT3G06890 Arabidopsis thaliana HOM05D006680 ORTHO05D008206 4.2e-33 144.8 100 77.0
Glyma.07G246700 Glycine max HOM05D006680 ORTHO05D008206 4.2e-33 144.8 107 68.2
AL3G18020 Arabidopsis lyrata HOM05D006680 ORTHO05D008206 7.2e-33 144.1 100 77.0
Medtr4g120020 Medicago truncatula HOM05D006680 ORTHO05D008206 2.1e-32 142.5 106 71.7
Nn3g21479 Nelumbo nucifera HOM05D006680 ORTHO05D008206 4.7e-32 141.4 107 72.0
Sp3g05850 Schrenkiella parvula HOM05D006680 ORTHO05D008206 8.0e-32 140.6 97 76.3
TPR.G3164 Trifolium pratense HOM05D006680 ORTHO05D008206 3.0e-31 138.7 91 78.0
DCAR_030521 Daucus carota HOM05D006680 ORTHO05D008206 3.9e-31 138.3 118 61.9
Psat4g026840 Pisum sativum HOM05D006680 ORTHO05D008206 5.2e-31 137.9 92 77.2
Phvul.003G097003 Phaseolus vulgaris HOM05D006680 ORTHO05D008206 1.5e-30 136.3 92 76.1
PSO832G1781 Papaver somniferum HOM05D006680 ORTHO05D008206 1.8e-28 129.4 124 58.1
PSO210G6323 Papaver somniferum HOM05D006680 ORTHO05D008206 5.3e-28 127.9 124 58.1
PGR004G0310 Punica granatum HOM05D006680 ORTHO05D008206 5.3e-28 127.9 122 59.8
PGR031G3343 Punica granatum HOM05D006680 ORTHO05D008206 9.1e-28 127.1 116 56.0
Sabra10G0008300 Salix brachista HOM05D006680 ORTHO05D008206 9.1e-28 127.1 115 60.0
HanXRQChr03g0089341 Helianthus annuus HOM05D006680 ORTHO05D008206 2.0e-27 125.9 120 58.3
MBI18_g06870_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 2.0e-27 125.9 112 62.5
PSO170G5007 Papaver somniferum HOM05D006680 ORTHO05D008206 2.0e-27 125.9 99 72.7
PSO017G4993 Papaver somniferum HOM05D006680 ORTHO05D008206 4.5e-27 124.8 99 71.7
Rhsim04G0223700 Rhododendron simsii HOM05D006680 ORTHO05D008206 7.7e-27 124.0 96 67.7
Rhsim09G0007300 Rhododendron simsii HOM05D006680 ORTHO05D008206 7.7e-27 124.0 96 67.7
ATR0796G044 Amborella trichopoda HOM05D006680 ORTHO05D008206 8.5e-26 120.6 116 58.6
MD16G1168200 Malus domestica HOM05D006680 ORTHO05D008206 3.2e-25 118.6 113 62.8
unitig_32.g11869 Utricularia gibba HOM05D006680 ORTHO05D008206 4.2e-25 118.2 120 53.3
Os03g0343800 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 1.2e-24 116.7 107 59.8
HPP92_000110 Vanilla planifolia HOM05D006680 ORTHO05D008206 1.8e-23 112.8 112 54.5
Thecc.09G272700 Theobroma cacao HOM05D006680 ORTHO05D008206 5.7e-22 107.8 82 70.7
Thecc.05G268700 Theobroma cacao HOM05D006680 ORTHO05D008206 8.3e-21 104.0 91 65.9
Zm00001eb124100 Zea mays HOM05D006680 ORTHO05D008206 1.4e-20 103.2 106 53.8
Zm00001eb016470 Zea mays HOM05D006680 ORTHO05D008206 2.4e-20 102.4 107 55.1
Zm00001eb394930 Zea mays HOM05D006680 ORTHO05D008206 3.8e-18 95.1 90 61.1
Eucgr.H03932 Eucalyptus grandis HOM05D006680 ORTHO05D008206 4.2e-17 91.7 116 48.3
Os07g0673801 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 1.2e-14 83.6 110 47.3
TAR633G0386 Trochodendron aralioides HOM05D006680 ORTHO05D008206 1.5e-14 83.2 123 43.9
SalBow5G0837 Salvia bowleyana HOM05D006680 ORTHO05D008206 2.0e-14 82.8 117 43.6
MELO3C006671.2 Cucumis melo HOM05D006680 ORTHO05D008206 8.6e-10 67.4 52 67.3
Oeu057714.1 Olea europaea HOM05D006680 ORTHO05D008206 2.1e-08 62.8 48 68.8
SEGI_26321 Sequoiadendron giganteum HOM05D047374 ORTHO05D008206 3.4e-06 55.5 111 37.8
SalBow3G3394 Salvia bowleyana HOM05D003064 ORTHO05D001733 7.5e-06 54.3 64 37.5
Dinv44367 Davidia involucrata HOM05D010970 ORTHO05D012912 9.8e-06 53.9 33 81.8


User provided reference genes

Program Settings