Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 1.4e-142 510.0 329 100.0
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 1.5e-40 171.0 317 41.6
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 2.9e-36 156.8 305 40.3
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 9.8e-32 141.7 317 34.7
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.7e-31 141.0 317 34.7
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 3.7e-31 139.8 306 35.0
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 1.8e-30 137.5 297 47.8
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.8e-25 120.9 296 43.6
SalBow7G0780 Salvia bowleyana HOM05D007160 ORTHO05D005331 2.7e-21 107.1 298 32.6
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 1.3e-20 104.8 307 33.2
SalBow7G0182 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.3e-20 104.8 298 32.2
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 1.1e-17 95.1 151 47.0
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 6.8e-17 92.4 133 44.4
unitig_749.g13658 Utricularia gibba HOM05D020686 ORTHO05D005331 1.3e-15 88.2 299 26.4
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 6.4e-15 85.9 182 39.0
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 8.3e-15 85.5 136 44.1
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.2e-14 83.6 118 49.2
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.1e-14 83.2 118 48.3
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 5.4e-14 82.8 165 40.0
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.6e-13 81.3 114 48.2
unitig_26.g9356 Utricularia gibba HOM05D020686 ORTHO05D005331 2.1e-13 80.9 291 26.5
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 3.5e-13 80.1 159 37.7
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.6e-13 79.7 114 47.4
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 6.0e-13 79.3 350 35.7
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.0e-12 77.0 114 47.4
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 3.9e-12 76.6 297 35.4
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 3.9e-12 76.6 326 33.1
unitig_8.g3362 Utricularia gibba HOM05D020686 ORTHO05D005331 3.9e-12 76.6 294 27.6
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 1.5e-11 74.7 232 34.1
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.9e-11 74.3 297 28.6
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.9e-11 74.3 117 46.2
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 3.3e-11 73.6 311 35.4
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 1.2e-10 71.6 137 38.7
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 2.1e-10 70.9 155 39.4
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 2.8e-10 70.5 348 33.6
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 2.8e-10 70.5 94 43.6
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 3.6e-10 70.1 297 33.3
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 6.2e-10 69.3 306 32.4
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.8e-09 67.8 86 46.5
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.8e-09 67.8 86 46.5
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 2.3e-09 67.4 329 31.3
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 3.1e-09 67.0 329 35.3
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 3.1e-09 67.0 296 32.4
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 4.0e-09 66.6 162 32.1
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 6.8e-09 65.9 199 33.7
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 8.9e-09 65.5 292 26.4
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 1.2e-08 65.1 107 39.3
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 1.2e-08 65.1 309 30.1
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 1.5e-08 64.7 189 31.7
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 3.4e-08 63.5 185 31.4
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 4.4e-08 63.2 153 35.3
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 4.4e-08 63.2 100 42.0
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 5.8e-08 62.8 161 31.1
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.3e-07 61.6 213 29.1
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.3e-07 61.6 213 29.1
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 1.3e-07 61.6 85 41.2
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 1.7e-07 61.2 224 30.4
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 1.7e-07 61.2 144 39.6
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.7e-07 61.2 76 44.7
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 2.2e-07 60.8 303 32.0
Manes.16G031700 Manihot esculenta HOM05D007160 ORTHO05D005331 3.7e-07 60.1 155 29.7
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 4.9e-07 59.7 299 30.1
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 6.4e-07 59.3 80 42.5
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 6.4e-07 59.3 72 40.3
unitig_22.g6750 Utricularia gibba HOM05D020686 ORTHO05D005331 6.4e-07 59.3 306 31.0
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.1e-06 58.5 160 33.1
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 1.1e-06 58.5 167 32.3
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.4e-06 58.2 232 28.9
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 1.9e-06 57.8 295 32.2
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 3.2e-06 57.0 84 41.7
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.2e-06 57.0 107 36.4
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 5.4e-06 56.2 151 34.4
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 5.4e-06 56.2 285 36.1
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 9.2e-06 55.5 302 27.2


User provided reference genes

Program Settings