Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g39210 Nelumbo nucifera HOM05D007609 ORTHO05D009539 2.5e-62 241.9 117 100.0
Nn2g11764 Nelumbo nucifera HOM05D007609 ORTHO05D009539 5.2e-20 101.3 81 61.7
TAR383G0714 Trochodendron aralioides HOM05D007609 ORTHO05D009539 5.4e-17 91.3 77 58.4
TAR626G0143 Trochodendron aralioides HOM05D007609 ORTHO05D025968 6.6e-15 84.3 77 54.5
Haze_25706 Corylus avellana HOM05D007609 ORTHO05D009539 5.6e-14 81.3 78 53.8
Aqoxy7G01699 Aquilegia oxysepala HOM05D007609 ORTHO05D009539 7.3e-14 80.9 82 48.8
CSS0012617 Camellia sinensis var. sinensis HOM05D007609 ORTHO05D009539 3.6e-13 78.6 79 54.4
Manes.16G116800 Manihot esculenta HOM05D007609 ORTHO05D009539 1.3e-10 70.1 77 48.1
Psat1g041120 Pisum sativum HOM05D007609 ORTHO05D009539 1.7e-10 69.7 78 47.4
Dinv38045 Davidia involucrata HOM05D007609 ORTHO05D009539 6.4e-10 67.8 77 49.4
Hma1.2p1_0018F.1_g013450 Hydrangea macrophylla HOM05D007609 ORTHO05D009539 8.3e-10 67.4 79 45.6
QL05p023464 Quercus lobata HOM05D007609 ORTHO05D009539 8.3e-10 67.4 82 43.9
Thecc.09G111700 Theobroma cacao HOM05D007609 ORTHO05D009539 8.3e-10 67.4 77 44.2
Sabra18G0066900 Salix brachista HOM05D007609 ORTHO05D009539 1.1e-09 67.0 77 46.8
Manes.03G019500 Manihot esculenta HOM05D007609 ORTHO05D009539 2.4e-09 65.9 77 45.5
TPR.G35275 Trifolium pratense HOM05D007609 ORTHO05D009539 3.2e-09 65.5 85 41.2
Gohir.A06G061700 Gossypium hirsutum HOM05D007609 ORTHO05D009539 4.1e-09 65.1 78 43.6
Gorai.010G069800 Gossypium raimondii HOM05D007609 ORTHO05D009539 7.1e-09 64.3 78 43.6
Eucgr.C01049 Eucalyptus grandis HOM05D007609 ORTHO05D009539 9.2e-09 63.9 82 43.9
Lalb_Chr22g0352851 Lupinus albus HOM05D007609 ORTHO05D009539 9.2e-09 63.9 82 43.9
QL02p085521 Quercus lobata HOM05D007609 ORTHO05D009539 1.2e-08 63.5 80 43.8
Cfa003264 Carpinus fangiana HOM05D007609 ORTHO05D009539 2.7e-08 62.4 78 43.6
Eucgr.C03849 Eucalyptus grandis HOM05D007609 ORTHO05D009539 4.6e-08 61.6 85 44.7
Potri.018G078900 Populus trichocarpa HOM05D007609 ORTHO05D009539 4.6e-08 61.6 78 44.9
QL10p054851 Quercus lobata HOM05D007609 ORTHO05D009539 4.6e-08 61.6 82 41.5
Gohir.D06G060000 Gossypium hirsutum HOM05D007609 ORTHO05D009539 6.0e-08 61.2 78 42.3
Lj2g0010717 Lotus japonicus HOM05D007609 ORTHO05D009539 6.0e-08 61.2 84 39.3
Ciclev10010038m.g Citrus clementina HOM05D007609 ORTHO05D009539 7.8e-08 60.8 85 45.9
Ca_25525_v3 Cicer arietinum L. HOM05D007609 ORTHO05D009539 1.0e-07 60.5 82 39.0
Glyma.07G087100 Glycine max HOM05D007609 ORTHO05D009539 1.0e-07 60.5 78 41.0
FAN28G0995 Fragaria x ananassa HOM05D007609 ORTHO05D009539 1.3e-07 60.1 79 44.3
Atru.chr7.1339 Acer truncatum HOM05D007609 ORTHO05D009539 2.3e-07 59.3 79 45.6
Glyma.09G189800 Glycine max HOM05D007609 ORTHO05D009539 2.3e-07 59.3 79 38.0
Rhsim08G0221700 Rhododendron simsii HOM05D007609 ORTHO05D009539 3.9e-07 58.5 46 58.7
Hma1.2p1_0092F.1_g046650 Hydrangea macrophylla HOM05D007609 ORTHO05D009539 5.1e-07 58.2 79 45.6
RcHm_v2.0_Chr2g0090641 Rosa chinensis HOM05D007609 ORTHO05D009539 8.6e-07 57.4 82 46.3
Cpa.g.sc451.1 Carica papaya HOM05D007609 ORTHO05D009539 1.5e-06 56.6 80 42.5
Potri.006G159300 Populus trichocarpa HOM05D007609 ORTHO05D009539 1.9e-06 56.2 78 39.7
Phvul.004G162600 Phaseolus vulgaris HOM05D007609 ORTHO05D009539 3.3e-06 55.5 82 36.6
FvH4_1g05030 Fragaria vesca HOM05D007609 ORTHO05D009539 5.6e-06 54.7 82 42.7
FAN26G1953 Fragaria x ananassa HOM05D007609 ORTHO05D009539 5.6e-06 54.7 82 42.7
FAN26G2876 Fragaria x ananassa HOM05D007609 ORTHO05D009539 5.6e-06 54.7 82 42.7
Lalb_Chr05g0222821 Lupinus albus HOM05D007609 ORTHO05D009539 5.6e-06 54.7 92 37.0
vmacro18908 Vaccinium macrocarpon HOM05D007609 ORTHO05D009539 5.6e-06 54.7 50 52.0
TAR624G1182 Trochodendron aralioides HOM05D007609 ORTHO05D009539 9.5e-06 53.9 76 43.4


User provided reference genes

Program Settings