Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 3.0e-108 395.2 202 100.0
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 2.9e-58 229.2 208 61.1
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 1.2e-53 213.8 207 60.4
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 2.1e-53 213.0 209 59.8
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 6.8e-52 208.0 189 61.9
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 6.4e-50 201.4 210 56.7
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 1.4e-49 200.3 206 57.3
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 1.9e-49 199.9 186 61.8
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 1.6e-48 196.8 210 57.6
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 2.1e-48 196.4 204 54.9
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 3.5e-48 195.7 207 58.0
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.0e-47 194.1 216 55.1
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 1.3e-47 193.7 179 59.8
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 1.7e-47 193.4 210 53.3
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 2.3e-47 193.0 207 52.2
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 3.0e-47 192.6 212 56.1
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 3.9e-47 192.2 191 57.6
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 6.6e-47 191.4 205 57.1
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 8.6e-47 191.0 209 54.5
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.1e-46 190.7 195 55.9
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 1.5e-46 190.3 137 71.5
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 1.5e-46 190.3 169 59.8
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 1.9e-46 189.9 208 54.3
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 3.3e-46 189.1 110 82.7
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 3.3e-46 189.1 181 57.5
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 4.3e-46 188.7 197 55.3
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 4.3e-46 188.7 212 54.7
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 4.3e-46 188.7 177 62.7
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 5.6e-46 188.3 189 54.5
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 9.6e-46 187.6 170 61.2
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 1.6e-45 186.8 135 69.6
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 1.6e-45 186.8 125 76.8
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.1e-45 186.4 190 55.3
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 2.1e-45 186.4 125 79.2
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.8e-45 186.0 188 56.9
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 2.8e-45 186.0 198 55.6
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 6.2e-45 184.9 197 54.8
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 6.2e-45 184.9 179 57.5
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 6.2e-45 184.9 148 67.6
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 1.4e-44 183.7 204 53.4
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 1.4e-44 183.7 204 53.4
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.4e-44 183.7 109 82.6
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.8e-44 183.3 127 71.7
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 2.4e-44 183.0 203 53.2
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 2.4e-44 183.0 141 70.2
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.4e-44 183.0 108 83.3
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 4.0e-44 182.2 212 51.9
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 4.0e-44 182.2 123 74.0
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 5.2e-44 181.8 179 58.7
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 5.2e-44 181.8 192 55.2
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 5.2e-44 181.8 147 63.3
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 5.2e-44 181.8 179 58.7
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 6.8e-44 181.4 179 56.4
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 8.9e-44 181.0 109 83.5
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 1.2e-43 180.6 176 56.8
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.2e-43 180.6 221 53.8
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 1.2e-43 180.6 109 81.7
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 1.2e-43 180.6 107 83.2
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 1.2e-43 180.6 203 56.7
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 1.5e-43 180.3 109 81.7
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 2.0e-43 179.9 104 86.5
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 2.0e-43 179.9 178 56.7
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 2.0e-43 179.9 205 52.7
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 2.0e-43 179.9 109 78.9
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 2.0e-43 179.9 108 83.3
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 2.0e-43 179.9 183 54.1
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 2.6e-43 179.5 106 84.0
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 2.6e-43 179.5 106 84.0
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 2.6e-43 179.5 106 84.0
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 2.6e-43 179.5 106 84.0
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 2.6e-43 179.5 106 84.0
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 2.6e-43 179.5 184 58.7
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 2.6e-43 179.5 121 77.7
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 3.4e-43 179.1 106 84.0
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 4.4e-43 178.7 107 82.2
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 5.8e-43 178.3 106 83.0
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 7.6e-43 177.9 222 52.7
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 7.6e-43 177.9 106 84.0
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 7.6e-43 177.9 120 75.8
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 1.3e-42 177.2 101 88.1
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 1.7e-42 176.8 102 85.3
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.7e-42 176.8 201 53.2
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 2.2e-42 176.4 159 61.0
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 2.9e-42 176.0 109 79.8
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 2.9e-42 176.0 104 81.7
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 4.9e-42 175.3 201 53.2
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 6.4e-42 174.9 107 79.4
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 6.4e-42 174.9 107 79.4
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 1.1e-41 174.1 102 83.3
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 1.1e-41 174.1 109 78.0
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.4e-41 173.7 140 62.9
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 2.4e-41 172.9 140 62.9
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 3.2e-41 172.6 118 74.6
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 4.2e-41 172.2 203 50.7
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 1.6e-40 170.2 127 68.5
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.6e-40 170.2 106 76.4
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 2.1e-40 169.9 102 79.4
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.1e-40 169.9 119 70.6
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 8.7e-39 164.5 102 76.5
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 1.9e-38 163.3 102 77.5
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.3e-37 160.6 115 70.4
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 7.6e-35 151.4 106 69.8
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 6.4e-34 148.3 106 67.0
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 2.4e-33 146.4 106 65.1
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 3.2e-33 146.0 100 70.0
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 8.7e-31 137.9 132 53.0
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 2.5e-30 136.3 91 74.7
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 2.1e-29 133.3 71 88.7
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 5.8e-27 125.2 74 79.7
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 1.6e-24 117.1 63 87.3
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 5.8e-19 98.6 56 85.7
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 1.3e-18 97.4 93 50.5
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 2.7e-16 89.7 44 90.9
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 2.7e-16 89.7 62 74.2
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 7.9e-16 88.2 77 54.5
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 7.6e-11 71.6 44 72.7
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 8.4e-10 68.2 61 52.5


User provided reference genes

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