Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23872 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.1e-167 593.2 293 100.0
Nn8g38834 Nelumbo nucifera HOM05D008372 ORTHO05D010559 6.3e-115 417.9 230 92.2
Nn1g03461 Nelumbo nucifera HOM05D008372 ORTHO05D010559 5.9e-105 384.8 238 81.1
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 5.5e-103 378.3 251 75.3
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 3.6e-102 375.6 262 69.5
Aqoxy3G00272 Aquilegia oxysepala HOM05D008372 ORTHO05D010559 1.4e-101 373.6 259 72.2
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 1.5e-100 370.2 271 68.3
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 1.5e-100 370.2 271 68.3
PSO384G0617 Papaver somniferum HOM05D008372 ORTHO05D010559 4.4e-100 368.6 261 67.8
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 3.7e-99 365.5 260 67.3
PSO339G4146 Papaver somniferum HOM05D008372 ORTHO05D010559 7.0e-98 361.3 251 68.5
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 1.3e-96 357.1 251 69.7
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 2.3e-96 356.3 271 65.3
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 5.0e-96 355.1 274 65.0
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 5.0e-96 355.1 269 63.2
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 2.5e-95 352.8 260 66.2
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 5.5e-95 351.7 258 68.6
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 3.6e-94 349.0 260 63.8
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 3.6e-94 349.0 251 67.3
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 6.8e-93 344.7 251 66.1
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 8.9e-93 344.4 260 65.4
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 8.9e-93 344.4 260 65.8
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 5.7e-92 341.7 260 65.0
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 7.5e-92 341.3 242 69.0
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 2.2e-91 339.7 263 63.1
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 2.8e-91 339.3 264 62.9
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 2.8e-91 339.3 263 63.1
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 7.0e-90 334.7 261 64.4
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 2.0e-89 333.2 241 66.0
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 3.9e-88 328.9 262 61.5
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 7.3e-87 324.7 252 65.1
Haze_14152 Corylus avellana HOM05D008372 ORTHO05D010559 1.2e-84 317.4 277 58.1
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 7.0e-82 308.1 250 63.6
Pp3c9_18240 Physcomitrium patens HOM05D008372 ORTHO05D010559 2.1e-78 296.6 261 57.9
AagrBONN_evm.TU.Sc2ySwM_117.1277 Anthoceros agrestis HOM05D008372 ORTHO05D010559 4.7e-78 295.4 261 57.1
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 8.9e-77 291.2 261 55.9
CBR_g23242 Chara braunii HOM05D008372 ORTHO05D010559 1.0e-72 277.7 248 56.9
Mapoly0081s0037 Marchantia polymorpha HOM05D008372 ORTHO05D010559 2.3e-72 276.6 252 56.3
SMO356G0307 Selaginella moellendorffii HOM05D008372 ORTHO05D010559 8.1e-70 268.1 260 51.9
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 4.0e-69 265.8 245 57.6
Nn1g03560 Nelumbo nucifera HOM05D008372 ORTHO05D010559 9.2e-66 254.6 211 69.2
Nn4g22381 Nelumbo nucifera HOM05D008372 ORTHO05D010559 3.5e-57 226.1 137 86.1
Nn7g36676 Nelumbo nucifera HOM05D008372 ORTHO05D010559 4.0e-53 212.6 131 84.7
SEGI_35369 Sequoiadendron giganteum HOM05D008372 ORTHO05D010559 5.3e-53 212.2 166 61.4
PRCOL_00000444 Prasinoderma coloniale HOM05D008372 ORTHO05D010559 3.4e-52 209.5 252 44.8
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 1.8e-40 170.6 140 62.9
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 1.1e-39 167.9 140 61.4
Migut.L00318 Erythranthe guttata HOM05D008372 ORTHO05D010559 1.3e-38 164.5 108 69.4
Oeu008425.1 Olea europaea HOM05D008372 ORTHO05D010559 2.0e-36 157.1 148 56.8
Solyc02g063190.2 Solanum lycopersicum HOM05D008372 ORTHO05D010559 7.6e-36 155.2 100 72.0
Cc07_g08820 Coffea canephora HOM05D008372 ORTHO05D010559 2.1e-33 147.1 115 64.3
Peaxi162Scf00501g00324 Petunia axillaris HOM05D008372 ORTHO05D010559 3.5e-33 146.4 85 81.2
RcHm_v2.0_Chr6g0252551 Rosa chinensis HOM05D008372 ORTHO05D010559 1.2e-28 131.3 81 70.4
Actinidia15884 Actinidia chinensis HOM05D008372 ORTHO05D010559 1.4e-26 124.4 106 59.4
Potri.004G099466 Populus trichocarpa HOM05D008372 ORTHO05D010559 2.5e-23 113.6 96 57.3
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 2.2e-11 73.9 119 40.3
FAN15G2669 Fragaria x ananassa HOM05D008372 ORTHO05D010559 2.0e-07 60.8 64 48.4
Nn2g13321 Nelumbo nucifera HOM05D008372 ORTHO05D275445 4.4e-07 59.7 30 93.3


User provided reference genes

Program Settings