Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 1.5e-149 532.7 255 100.0
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 2.1e-130 469.2 282 78.7
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 4.0e-126 454.9 281 78.6
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 6.9e-126 454.1 282 76.6
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 8.4e-124 447.2 273 78.0
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 1.1e-123 446.8 274 77.7
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 1.9e-123 446.0 274 77.0
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 7.1e-123 444.1 282 76.2
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 1.2e-122 443.4 281 74.4
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 1.2e-122 443.4 273 78.0
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.1e-122 442.6 273 77.3
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 3.5e-122 441.8 279 74.9
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 4.6e-122 441.4 274 76.3
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 4.6e-122 441.4 282 74.5
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 1.0e-121 440.3 282 74.5
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 1.0e-121 440.3 272 77.2
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 1.0e-121 440.3 282 75.2
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 5.1e-121 438.0 273 76.9
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 5.1e-121 438.0 272 77.2
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 6.7e-121 437.6 287 73.9
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 8.7e-121 437.2 280 75.0
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 8.7e-121 437.2 276 75.4
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 1.1e-120 436.8 273 77.7
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 1.9e-120 436.0 272 76.1
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 2.5e-120 435.6 282 73.0
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 9.7e-120 433.7 279 74.2
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 1.6e-119 433.0 273 76.9
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 2.2e-119 432.6 283 72.8
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 2.8e-119 432.2 287 73.2
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 3.7e-119 431.8 285 72.6
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 4.8e-119 431.4 275 76.4
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 6.3e-119 431.0 273 76.9
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 6.3e-119 431.0 283 74.6
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 1.8e-118 429.5 282 71.6
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 2.4e-118 429.1 282 74.8
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 4.1e-118 428.3 275 75.6
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 5.3e-118 427.9 282 74.8
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 5.3e-118 427.9 282 74.8
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 1.2e-117 426.8 271 76.4
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 2.6e-117 425.6 275 75.3
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 3.4e-117 425.2 274 72.3
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 3.4e-117 425.2 274 71.9
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 3.4e-117 425.2 282 70.9
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 1.0e-116 423.7 282 69.5
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 1.7e-116 422.9 288 71.2
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 2.2e-116 422.5 280 71.8
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 2.2e-116 422.5 274 71.9
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 2.9e-116 422.2 282 71.3
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 2.9e-116 422.2 275 76.0
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 2.9e-116 422.2 307 68.4
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 5.0e-116 421.4 288 71.5
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 8.5e-116 420.6 285 71.9
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 8.5e-116 420.6 288 71.5
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 1.1e-115 420.2 270 75.9
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 1.4e-115 419.9 283 70.3
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 2.5e-115 419.1 273 73.3
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 2.5e-115 419.1 274 73.7
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 3.2e-115 418.7 295 71.2
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 3.2e-115 418.7 272 73.2
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 4.2e-115 418.3 273 71.4
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 5.5e-115 417.9 281 69.8
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 7.2e-115 417.5 276 71.7
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 9.4e-115 417.2 307 67.4
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 9.4e-115 417.2 274 71.2
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 1.2e-114 416.8 271 72.3
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 2.1e-114 416.0 270 73.7
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 2.1e-114 416.0 286 69.6
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 4.6e-114 414.8 276 70.7
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 4.6e-114 414.8 271 71.2
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 6.1e-114 414.5 273 71.8
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 7.9e-114 414.1 315 67.3
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 1.0e-113 413.7 271 73.1
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.0e-113 413.7 270 73.0
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 1.4e-113 413.3 278 74.5
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 3.0e-113 412.1 282 68.1
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 5.1e-113 411.4 271 70.5
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 2.5e-112 409.1 274 70.8
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 7.4e-112 407.5 252 77.8
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 1.3e-111 406.8 260 77.3
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 2.2e-111 406.0 271 74.2
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 2.8e-111 405.6 274 70.1
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 3.7e-111 405.2 276 70.7
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 1.8e-110 402.9 282 69.1
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 3.1e-110 402.1 281 69.0
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 6.9e-110 401.0 287 67.6
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 6.9e-110 401.0 258 74.4
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 6.9e-110 401.0 367 57.2
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.5e-109 399.8 248 76.6
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 2.6e-109 399.1 281 68.3
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 2.9e-108 395.6 276 68.1
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 2.9e-108 395.6 276 68.1
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 6.5e-108 394.4 304 65.1
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 4.2e-107 391.7 271 68.6
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 7.2e-107 391.0 274 66.8
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 9.4e-107 390.6 270 69.6
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 2.1e-106 389.4 274 66.4
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.8e-105 386.3 276 68.5
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 2.3e-105 386.0 277 66.4
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 3.9e-105 385.2 284 68.3
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 5.1e-105 384.8 269 70.3
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 6.7e-105 384.4 273 66.7
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 2.0e-104 382.9 322 59.9
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 4.8e-103 378.3 270 66.3
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 2.2e-100 369.4 267 66.7
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 6.5e-100 367.9 197 87.3
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 4.2e-99 365.2 206 83.5
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 5.5e-99 364.8 278 62.6
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 9.4e-99 364.0 309 59.5
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 3.9e-97 358.6 191 87.4
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 4.4e-96 355.1 206 80.1
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 4.4e-96 355.1 206 78.6
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 2.8e-95 352.4 245 70.2
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 2.5e-91 339.3 218 74.3
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 3.6e-90 335.5 292 59.2
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 3.7e-87 325.5 189 81.0
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 3.7e-87 325.5 189 81.0
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 5.9e-85 318.2 197 78.7
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 4.0e-81 305.4 278 51.1
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 1.6e-77 293.5 278 51.8
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 4.5e-77 292.0 281 53.4
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 2.8e-71 272.7 211 65.9
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 7.0e-70 268.1 208 61.5
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 3.3e-67 259.2 156 82.7
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 4.7e-66 255.4 271 49.1
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 2.7e-61 239.6 151 74.2
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 3.4e-56 222.6 302 45.0
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 4.4e-56 222.2 211 50.7
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 6.4e-55 218.4 131 77.9
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 2.0e-48 196.8 182 51.6
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 4.4e-48 195.7 252 43.7
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 2.0e-40 170.2 174 50.0
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 9.6e-35 151.4 210 40.0
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 1.7e-31 140.6 274 34.7
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 9.3e-22 108.2 102 52.9
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 2.6e-16 90.1 50 82.0
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 5.5e-14 82.4 40 85.0
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 1.9e-11 73.9 82 45.1


User provided reference genes

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