Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.9e-150 535.8 269 100.0
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 4.3e-86 322.0 220 73.2
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.9e-81 306.6 275 61.5
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 6.0e-80 301.6 272 58.1
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 8.2e-77 291.2 273 57.1
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 3.1e-76 289.3 272 56.2
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 9.0e-76 287.7 276 56.9
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 2.6e-75 286.2 273 55.3
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 7.6e-75 284.6 255 58.8
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 7.6e-75 284.6 270 57.0
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 2.2e-74 283.1 270 56.7
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 3.8e-74 282.3 275 55.6
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 4.2e-73 278.9 214 63.6
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 5.5e-73 278.5 189 70.9
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 9.3e-73 277.7 276 54.3
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 9.3e-73 277.7 276 54.3
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 9.3e-73 277.7 275 54.9
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 2.1e-72 276.6 265 55.5
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 2.7e-72 276.2 228 61.0
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 3.6e-72 275.8 274 54.4
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 3.6e-72 275.8 270 57.0
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 6.1e-72 275.0 204 63.7
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.8e-71 273.5 270 57.0
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 3.0e-71 272.7 208 61.1
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 3.9e-71 272.3 270 56.7
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 1.5e-70 270.4 276 53.3
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 7.4e-70 268.1 278 53.6
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 9.7e-70 267.7 269 53.5
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.3e-69 267.3 267 53.2
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 1.6e-69 266.9 277 53.8
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 2.8e-69 266.2 253 54.9
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.4e-68 263.8 259 51.0
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 1.8e-68 263.5 230 60.0
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 1.8e-68 263.5 232 59.9
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 5.3e-68 261.9 230 59.1
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 9.1e-68 261.2 269 52.4
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 9.1e-68 261.2 265 51.3
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.5e-67 260.4 263 55.1
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 1.5e-67 260.4 217 59.0
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 1.5e-67 260.4 243 53.9
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 5.9e-67 258.5 204 60.3
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 7.7e-67 258.1 208 60.6
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.0e-66 257.7 264 52.7
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 2.9e-66 256.1 206 58.3
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 3.8e-66 255.8 267 52.1
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 5.0e-66 255.4 274 50.0
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 6.5e-66 255.0 246 51.2
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 1.4e-65 253.8 233 57.9
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.4e-65 253.8 233 57.9
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.5e-65 253.1 233 57.5
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 2.5e-65 253.1 271 51.7
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 2.5e-65 253.1 261 53.3
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 3.2e-65 252.7 207 62.3
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 3.2e-65 252.7 268 51.1
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 4.2e-65 252.3 255 52.5
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 7.2e-65 251.5 262 53.1
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 7.2e-65 251.5 267 49.4
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 9.4e-65 251.1 207 61.8
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 9.4e-65 251.1 227 55.5
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 1.2e-64 250.8 271 55.4
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.2e-64 250.8 233 57.1
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 1.2e-64 250.8 206 60.7
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 1.6e-64 250.4 276 52.5
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 2.1e-64 250.0 264 54.2
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 2.1e-64 250.0 276 52.5
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 2.7e-64 249.6 245 54.7
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 3.6e-64 249.2 208 58.2
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 4.6e-64 248.8 264 52.3
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 1.4e-63 247.3 266 50.4
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 3.0e-63 246.1 260 55.0
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 3.0e-63 246.1 243 51.4
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 3.0e-63 246.1 201 58.2
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 1.5e-62 243.8 260 50.4
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 2.6e-62 243.0 264 51.1
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 2.6e-62 243.0 235 53.2
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 3.3e-62 242.7 243 51.4
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 1.7e-61 240.4 274 51.5
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 2.8e-61 239.6 266 50.8
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 2.8e-61 239.6 266 50.8
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 2.8e-61 239.6 266 50.8
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 4.8e-61 238.8 258 52.7
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 1.1e-60 237.7 280 48.9
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 1.4e-60 237.3 260 49.6
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 2.4e-60 236.5 260 49.6
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 5.3e-60 235.3 202 54.5
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 6.9e-60 235.0 243 50.6
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 6.5e-58 228.4 256 50.4
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 2.5e-57 226.5 253 48.6
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 9.4e-57 224.6 209 54.5
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 2.1e-56 223.4 255 46.7
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 2.1e-56 223.4 263 50.2
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 2.7e-56 223.0 259 45.9
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 3.6e-56 222.6 262 47.3
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 4.7e-56 222.2 207 54.6
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 1.0e-55 221.1 205 55.1
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 3.9e-55 219.2 258 47.3
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 1.3e-53 214.2 238 47.9
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 4.1e-52 209.1 267 46.4
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 5.2e-47 192.2 197 52.8
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 3.3e-46 189.5 199 51.3
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 7.7e-43 178.3 151 59.6
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.1e-41 174.5 200 53.5
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 1.7e-37 160.6 194 45.9
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.7e-37 159.5 133 55.6
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 1.8e-36 157.1 205 41.5
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 3.1e-36 156.4 205 42.0
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 6.3e-29 132.1 72 88.9
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 2.8e-24 116.7 194 38.7
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.6e-19 100.9 144 41.0
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 3.5e-19 99.8 201 34.8
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 1.0e-18 98.2 262 28.6
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 2.3e-18 97.1 75 60.0
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 5.0e-18 95.9 193 28.0
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.2e-16 91.3 66 62.1
Nn3g21845 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.9e-12 77.4 42 92.9
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 5.4e-12 75.9 72 56.9
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 5.4e-12 75.9 72 56.9


User provided reference genes

Program Settings