Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15313 Nelumbo nucifera HOM05D000260 ORTHO05D004405 3.6e-63 244.6 109 100.0
TAR433G0001 Trochodendron aralioides HOM05D000260 ORTHO05D004405 5.8e-13 77.8 92 44.6
TAR629G2530 Trochodendron aralioides HOM05D000072 ORTHO05D000026 2.9e-12 75.5 86 44.2
Cfa019743 Carpinus fangiana HOM05D000260 ORTHO05D004405 1.6e-10 69.7 76 46.1
QL10p025997 Quercus lobata HOM05D000260 ORTHO05D000318 1.6e-10 69.7 79 43.0
Lj5C152G14 Lonicera japonica HOM05D000260 ORTHO05D000318 3.5e-10 68.6 97 36.1
GSVIVG01008327001 Vitis vinifera HOM05D000260 ORTHO05D000318 4.6e-10 68.2 83 38.6
Sed0012270 Sechium edule HOM05D000260 ORTHO05D000318 7.8e-10 67.4 90 41.1
Lj5A152G71 Lonicera japonica HOM05D000260 ORTHO05D000318 1.7e-09 66.2 85 36.5
CiPaw.15G132900 Carya illinoinensis HOM05D000260 ORTHO05D004405 3.0e-09 65.5 83 38.6
CSS0036340 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 6.6e-09 64.3 78 38.5
COL.COLO4_33401 Corchorus olitorius HOM05D000260 ORTHO05D004405 6.6e-09 64.3 86 38.4
Actinidia02665 Actinidia chinensis HOM05D000260 ORTHO05D000318 8.6e-09 63.9 77 35.1
MD06G1218900 Malus domestica HOM05D000260 ORTHO05D000318 8.6e-09 63.9 74 41.9
Hma1.2p1_0653F.1_g196080 Hydrangea macrophylla HOM05D000260 ORTHO05D000318 1.5e-08 63.2 77 36.4
CSS0029034 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 1.9e-08 62.8 78 37.2
CSS0030141 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 1.9e-08 62.8 78 37.2
Cc04_g06930 Coffea canephora HOM05D000260 ORTHO05D000318 2.5e-08 62.4 77 37.7
Manes.05G132300 Manihot esculenta HOM05D000260 ORTHO05D000318 2.5e-08 62.4 78 42.3
RcHm_v2.0_Chr7g0186001 Rosa chinensis HOM05D000260 ORTHO05D000318 3.3e-08 62.0 78 39.7
CSS0035594 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 5.6e-08 61.2 75 38.7
COL.COLO4_07249 Corchorus olitorius HOM05D000260 ORTHO05D000318 7.3e-08 60.8 82 39.0
PSO017G7164 Papaver somniferum HOM05D000260 ORTHO05D000318 9.5e-08 60.5 100 32.0
Ca_25478_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 1.2e-07 60.1 76 40.8
Ciclev10018735m.g Citrus clementina HOM05D000260 ORTHO05D000318 2.8e-07 58.9 75 38.7
CsaV3_1G006880 Cucumis sativus L. HOM05D000260 ORTHO05D000318 3.6e-07 58.5 87 34.5
QL10p026182 Quercus lobata HOM05D000260 ORTHO05D000318 3.6e-07 58.5 79 39.2
CSS0016105 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 6.2e-07 57.8 79 34.2
Aa31LG7G3070 Aethionema arabicum HOM05D000260 ORTHO05D000318 8.0e-07 57.4 80 36.2
MELO3C002105.2 Cucumis melo HOM05D000260 ORTHO05D000318 1.4e-06 56.6 87 34.5
FAN08G3342 Fragaria x ananassa HOM05D000260 ORTHO05D000318 1.4e-06 56.6 75 34.7
Medtr6g083020 Medicago truncatula HOM05D000260 ORTHO05D000318 1.4e-06 56.6 76 38.2
Eucgr.B00810 Eucalyptus grandis HOM05D000072 ORTHO05D000026 2.3e-06 55.8 71 40.8
CSS0032470 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 3.1e-06 55.5 79 36.7
CSS0023814 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 4.0e-06 55.1 79 38.0
Medtr6g082850 Medicago truncatula HOM05D000260 ORTHO05D004405 4.0e-06 55.1 76 38.2
FAN04G0174 Fragaria x ananassa HOM05D000260 ORTHO05D000318 5.2e-06 54.7 78 34.6
CSS0035733 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 8.9e-06 53.9 79 36.7


User provided reference genes

Program Settings