Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13826 Nelumbo nucifera HOM05D011113 ORTHO05D001339 2.5e-214 748.4 365 100.0
Nn3g16594 Nelumbo nucifera HOM05D011113 ORTHO05D001339 2.3e-74 283.5 182 76.4
Nn3g19974 Nelumbo nucifera HOM05D011113 ORTHO05D001339 1.0e-53 214.9 207 51.7
Nn1g00933 Nelumbo nucifera HOM05D011113 ORTHO05D001339 7.3e-44 182.2 183 49.7
Nn3g18240 Nelumbo nucifera HOM05D011113 ORTHO05D001339 1.6e-30 137.9 129 48.1
Nn6g33839 Nelumbo nucifera HOM05D011113 ORTHO05D001339 1.1e-28 131.7 96 66.7
Nn4g26617 Nelumbo nucifera HOM05D011113 ORTHO05D001339 1.6e-27 127.9 114 51.8
Nn2g11110 Nelumbo nucifera HOM05D011113 ORTHO05D001339 6.4e-24 115.9 90 62.2
Nn5g27719 Nelumbo nucifera HOM05D011113 ORTHO05D001339 2.4e-23 114.0 90 58.9
Nn1g06295 Nelumbo nucifera HOM05D011113 ORTHO05D001339 7.8e-22 109.0 78 60.3
Nn2g10617 Nelumbo nucifera HOM05D011113 ORTHO05D001339 2.0e-17 94.4 123 42.3
Nn1g09184 Nelumbo nucifera HOM05D011113 ORTHO05D001339 1.5e-12 78.2 68 50.0
ClCG03G011420 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.2e-11 75.1 250 28.8
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.7e-11 73.2 187 28.9
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.2e-10 69.7 172 29.1
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 5.2e-10 69.7 170 27.1
Nn4g22025 Nelumbo nucifera HOM05D011113 ORTHO05D001339 6.8e-10 69.3 48 68.8
Lj3C270T6 Lonicera japonica HOM05D002180 ORTHO05D001339 8.9e-10 68.9 192 29.2
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 8.9e-10 68.9 169 27.8
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.5e-09 68.2 240 27.5
Lj1C335T7 Lonicera japonica HOM05D009066 ORTHO05D001339 3.4e-09 67.0 193 26.9
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 9.9e-09 65.5 165 26.1
PSO832G0078 Papaver somniferum HOM05D002180 ORTHO05D001339 9.9e-09 65.5 173 26.6
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.3e-08 65.1 149 30.9
MELO3C000403.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.3e-08 65.1 143 30.1
Lj7C284T2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-08 65.1 259 23.6
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 1.3e-08 65.1 267 22.5
MELO3C023377.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.7e-08 64.7 143 28.7
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-08 64.7 153 28.1
Lj8C523G12 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-08 64.7 146 29.5
Lju583C3G3 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-08 64.7 191 27.7
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 3.8e-08 63.5 140 30.7
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 3.8e-08 63.5 171 27.5
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 3.8e-08 63.5 243 25.5
Lj7C583T16 Lonicera japonica HOM05D002180 ORTHO05D001339 3.8e-08 63.5 165 27.3
Lj6A103G52 Lonicera japonica HOM05D002180 ORTHO05D001339 4.9e-08 63.2 158 25.3
MELO3C000406.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.4e-08 62.8 143 30.1
Sed0025559 Sechium edule HOM05D007588 ORTHO05D001339 6.4e-08 62.8 261 27.2
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 8.4e-08 62.4 197 24.4
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-07 62.0 178 27.5
Lj3C276T1 Lonicera japonica HOM05D009066 ORTHO05D001339 1.1e-07 62.0 184 27.2
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 1.1e-07 62.0 168 27.4
Lj7C641G7 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-07 61.6 79 44.3
Lj8P495T20 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-07 61.2 165 27.3
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-07 60.8 136 28.7
Lj8A607T65 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-07 60.5 194 26.8
ClCG00G004030 Citrullus lanatus HOM05D009184 ORTHO05D001339 4.2e-07 60.1 138 32.6
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 4.2e-07 60.1 241 24.5
Lj2P950T16 Lonicera japonica HOM05D002180 ORTHO05D001339 4.2e-07 60.1 167 24.6
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 4.2e-07 60.1 142 33.1
Lj9C659T14 Lonicera japonica HOM05D002180 ORTHO05D001339 4.2e-07 60.1 169 24.9
Prupe.4G281000 Prunus persica HOM05D002180 ORTHO05D001339 5.4e-07 59.7 127 29.1
Lj6C461T8 Lonicera japonica HOM05D002180 ORTHO05D001339 7.1e-07 59.3 172 27.9
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.1e-07 59.3 71 40.8
Lj5C600G1 Lonicera japonica HOM05D002180 ORTHO05D003085 9.3e-07 58.9 254 24.0
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.2e-06 58.5 138 33.3
MELO3C014251.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.2e-06 58.5 142 30.3
Lj1P545T41 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 58.5 172 26.7
Lj1A1140T45 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-06 58.2 154 25.3
Lj3C63T0 Lonicera japonica HOM05D009066 ORTHO05D001339 2.1e-06 57.8 170 27.6
Lj2C149T2 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-06 57.4 95 32.6
Lj7C117G7 Lonicera japonica HOM05D002180 ORTHO05D001339 3.5e-06 57.0 172 23.3
Lj2C907T4 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-06 56.6 82 35.4
Lj7C452G9 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-06 56.6 78 35.9
Lj2C47T11 Lonicera japonica HOM05D002180 ORTHO05D001339 7.8e-06 55.8 78 35.9
Lj3C991T5 Lonicera japonica HOM05D002180 ORTHO05D001339 7.8e-06 55.8 143 25.9
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 7.8e-06 55.8 82 35.4
PGSC0003DMG400023316 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.8e-06 55.8 70 35.7


User provided reference genes

Program Settings