Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08523 Nelumbo nucifera HOM05D000315 ORTHO05D276605 7.0e-13 75.9 35 100.0
Nn6g34305 Nelumbo nucifera HOM05D000315 ORTHO05D000527 8.0e-09 62.4 33 87.9
MBI04_g28562_MAGBIO Magnolia biondii HOM05D000315 ORTHO05D000527 1.2e-07 58.5 34 76.5
MBI12_g36687_MAGBIO Magnolia biondii HOM05D000315 ORTHO05D000527 2.6e-07 57.4 34 73.5
MBI04_g26980_MAGBIO Magnolia biondii HOM05D000315 ORTHO05D000527 9.8e-07 55.5 34 70.6
Rhsim01G0156100 Rhododendron simsii HOM05D000315 ORTHO05D000527 9.8e-07 55.5 33 72.7
Rhsim01G0156200 Rhododendron simsii HOM05D000315 ORTHO05D000527 9.8e-07 55.5 33 72.7
ATR0757G020 Amborella trichopoda HOM05D000315 ORTHO05D000527 1.3e-06 55.1 33 72.7
Rhsim07G0022700 Rhododendron simsii HOM05D000315 ORTHO05D000527 1.3e-06 55.1 33 72.7
vmacro13350 Vaccinium macrocarpon HOM05D000315 ORTHO05D000527 1.3e-06 55.1 33 72.7
vmacro20978 Vaccinium macrocarpon HOM05D000315 ORTHO05D000527 1.3e-06 55.1 33 72.7
Actinidia09580 Actinidia chinensis HOM05D000315 ORTHO05D000527 2.2e-06 54.3 33 72.7
Actinidia33451 Actinidia chinensis HOM05D000315 ORTHO05D000527 2.2e-06 54.3 33 72.7
Haze_16708 Corylus avellana HOM05D000315 ORTHO05D000527 2.2e-06 54.3 33 69.7
Oeu024425.1 Olea europaea HOM05D000315 ORTHO05D000527 2.9e-06 53.9 33 69.7
Oeu024427.1 Olea europaea HOM05D000315 ORTHO05D000527 2.9e-06 53.9 33 69.7
PSO478G2491 Papaver somniferum HOM05D000315 ORTHO05D000527 2.9e-06 53.9 33 72.7
PSO782G2800 Papaver somniferum HOM05D000315 ORTHO05D000527 2.9e-06 53.9 33 72.7
TAR375G0503 Trochodendron aralioides HOM05D000315 ORTHO05D000527 2.9e-06 53.9 33 72.7
Cpa.g.sc18.175 Carica papaya HOM05D000315 ORTHO05D000527 3.7e-06 53.5 33 69.7
Dinv32410 Davidia involucrata HOM05D000315 ORTHO05D000527 3.7e-06 53.5 33 69.7
CSS0031652 Camellia sinensis var. sinensis HOM05D000315 ORTHO05D000527 4.9e-06 53.1 33 72.7
CSS0043277 Camellia sinensis var. sinensis HOM05D000315 ORTHO05D000527 4.9e-06 53.1 33 72.7
Cfa001812 Carpinus fangiana HOM05D000315 ORTHO05D000527 4.9e-06 53.1 33 69.7
Dinv43744 Davidia involucrata HOM05D000315 ORTHO05D000527 4.9e-06 53.1 33 69.7
Duzib133G0594 Durio zibethinus HOM05D000315 ORTHO05D000527 4.9e-06 53.1 33 69.7
Duzib138G0660 Durio zibethinus HOM05D000315 ORTHO05D000527 4.9e-06 53.1 33 69.7
Potri.014G074700 Populus trichocarpa HOM05D000315 ORTHO05D000527 4.9e-06 53.1 33 69.7
PGR042G0903 Punica granatum HOM05D000315 ORTHO05D000527 4.9e-06 53.1 33 69.7
Thecc.01G370500 Theobroma cacao HOM05D000315 ORTHO05D000527 4.9e-06 53.1 33 69.7
GSVIVG01027587001 Vitis vinifera HOM05D000315 ORTHO05D000527 4.9e-06 53.1 33 69.7
Aa31LG5G230 Aethionema arabicum HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
Ca_06666_v3 Cicer arietinum L. HOM05D000315 ORTHO05D000246 6.4e-06 52.8 33 66.7
Cc02_g37050 Coffea canephora HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
DCAR_000895 Daucus carota HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
Migut.B01671 Erythranthe guttata HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
Nn1g01302 Nelumbo nucifera HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
Nitab4.5_0001376g0060 Nicotiana tabacum HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
Nitab4.5_0003356g0050 Nicotiana tabacum HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
Oeu025074.1 Olea europaea HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
Oeu062006.2 Olea europaea HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
Peaxi162Scf00008g01621 Petunia axillaris HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
SalBow7G4675 Salvia bowleyana HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
SGA_v2.0_scaffold153G37054 Striga asiatica HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
HPP92_022122 Vanilla planifolia HOM05D000315 ORTHO05D000527 6.4e-06 52.8 33 69.7
CAN.G170.63 Capsicum annuum HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 69.7
ECA246G2983 Erigeron canadensis HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 72.7
Gohir.A11G084300 Gossypium hirsutum HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 69.7
Gohir.D11G088400 Gossypium hirsutum HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 69.7
Gorai.007G094300 Gossypium raimondii HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 69.7
HanXRQChr06g0165151 Helianthus annuus HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 72.7
Nitab4.5_0001127g0070 Nicotiana tabacum HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 69.7
Nitab4.5_0003182g0030 Nicotiana tabacum HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 69.7
Peaxi162Scf00021g00236 Petunia axillaris HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 69.7
Psat3g112840 Pisum sativum HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 69.7
SEGI_14234 Sequoiadendron giganteum HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 72.7
Solyc01g091910.4 Solanum lycopersicum HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 69.7
Sopen01g037690 Solanum pennellii HOM05D000315 ORTHO05D000527 8.3e-06 52.4 33 69.7


User provided reference genes

Program Settings