Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08095 Nelumbo nucifera HOM05D001109 ORTHO05D001051 1.7e-19 98.2 45 100.0
Nn7g37339 Nelumbo nucifera HOM05D001109 ORTHO05D001051 8.4e-11 69.3 55 63.6
MSTRG.4826 Avicennia marina HOM05D001109 ORTHO05D001051 6.1e-09 63.2 38 73.7
TAR330G0002 Trochodendron aralioides HOM05D001109 ORTHO05D001051 1.8e-08 61.6 38 71.1
Migut.N01575 Erythranthe guttata HOM05D001109 ORTHO05D001051 1.1e-07 58.9 38 68.4
Manes.01G250700 Manihot esculenta HOM05D001109 ORTHO05D001051 1.1e-07 58.9 38 68.4
Potri.002G166400 Populus trichocarpa HOM05D001109 ORTHO05D001051 1.1e-07 58.9 38 65.8
CiPaw.02G037300 Carya illinoinensis HOM05D001109 ORTHO05D001051 1.5e-07 58.5 42 61.9
vmacro20871 Vaccinium macrocarpon HOM05D001109 ORTHO05D001051 2.5e-07 57.8 55 52.7
Sabra02G0145200 Salix brachista HOM05D001109 ORTHO05D001051 3.3e-07 57.4 38 65.8
QL04p058872 Quercus lobata HOM05D001109 ORTHO05D001051 5.7e-07 56.6 42 59.5
Thecc.01G349500 Theobroma cacao HOM05D001109 ORTHO05D001051 5.7e-07 56.6 38 63.2
Haze_11207 Corylus avellana HOM05D001109 ORTHO05D001051 7.4e-07 56.2 42 61.9
Sc01g0003090 Simmondsia chinensis HOM05D001109 ORTHO05D001051 7.4e-07 56.2 55 49.1
PGR042G3249 Punica granatum HOM05D001109 ORTHO05D001051 9.7e-07 55.8 42 61.9
Eucgr.E00081 Eucalyptus grandis HOM05D001109 ORTHO05D001051 1.3e-06 55.5 42 59.5
Actinidia28486 Actinidia chinensis HOM05D001109 ORTHO05D001051 1.6e-06 55.1 44 54.5
Cfa003850 Carpinus fangiana HOM05D001109 ORTHO05D001051 1.6e-06 55.1 42 59.5
Dinv43883 Davidia involucrata HOM05D003005 ORTHO05D004170 1.6e-06 55.1 38 65.8
Solyc01g095360.2 Solanum lycopersicum HOM05D001109 ORTHO05D001051 1.6e-06 55.1 42 59.5
Sopen01g039130 Solanum pennellii HOM05D001109 ORTHO05D001051 1.6e-06 55.1 42 59.5
PGSC0003DMG400000080 Solanum tuberosum HOM05D001109 ORTHO05D001051 1.6e-06 55.1 42 59.5
EL10Ac1g00332 Beta vulgaris HOM05D001109 ORTHO05D001051 2.2e-06 54.7 42 57.1
CSS0011580 Camellia sinensis var. sinensis HOM05D001109 ORTHO05D001051 2.2e-06 54.7 55 50.9
Haze_15600 Corylus avellana HOM05D001109 ORTHO05D001051 2.2e-06 54.7 42 57.1
Nn1g04397 Nelumbo nucifera HOM05D001109 ORTHO05D001051 2.2e-06 54.7 47 63.8
Nn6g33272 Nelumbo nucifera HOM05D001109 ORTHO05D001051 2.2e-06 54.7 34 70.6
Aqoxy7G00224 Aquilegia oxysepala HOM05D001109 ORTHO05D001051 2.8e-06 54.3 38 63.2
Ciclev10021815m.g Citrus clementina HOM05D001109 ORTHO05D001051 3.7e-06 53.9 37 56.8
DCAR_025234 Daucus carota HOM05D001109 ORTHO05D001051 6.3e-06 53.1 42 54.8
FvH4_7g15700 Fragaria vesca HOM05D001109 ORTHO05D001051 6.3e-06 53.1 38 60.5
FAN01G2402 Fragaria x ananassa HOM05D001109 ORTHO05D001051 6.3e-06 53.1 38 60.5
FAN06G0693 Fragaria x ananassa HOM05D001109 ORTHO05D001051 6.3e-06 53.1 38 60.5
FAN06G2199 Fragaria x ananassa HOM05D001109 ORTHO05D001051 6.3e-06 53.1 38 60.5
Hma1.2p1_0384F.1_g140860 Hydrangea macrophylla HOM05D001109 ORTHO05D001051 6.3e-06 53.1 38 63.2
Peaxi162Scf01367g00004 Petunia axillaris HOM05D001109 ORTHO05D001051 6.3e-06 53.1 42 59.5
Ca_09482_v3 Cicer arietinum L. HOM05D001109 ORTHO05D001051 8.2e-06 52.8 38 57.9
FAN03G1135 Fragaria x ananassa HOM05D001109 ORTHO05D001051 8.2e-06 52.8 38 60.5
MD01G1073700 Malus domestica HOM05D001109 ORTHO05D001051 8.2e-06 52.8 38 60.5
SalBow5G1095 Salvia bowleyana HOM05D001109 ORTHO05D001051 8.2e-06 52.8 38 63.2


User provided reference genes

Program Settings