Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08035 Nelumbo nucifera HOM05D001598 ORTHO05D007192 4.3e-46 187.6 91 100.0
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 2.5e-38 161.8 92 83.7
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 1.3e-37 159.5 91 83.5
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 1.6e-37 159.1 92 84.8
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 1.6e-37 159.1 92 84.8
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 2.8e-37 158.3 91 82.4
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 8.1e-37 156.8 92 81.5
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 1.4e-36 156.0 92 81.5
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 3.1e-36 154.8 92 81.5
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 3.1e-36 154.8 92 80.4
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 5.3e-36 154.1 92 82.6
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 5.3e-36 154.1 92 80.4
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 6.9e-36 153.7 92 81.5
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 9.0e-36 153.3 92 81.5
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 1.2e-35 152.9 92 80.4
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 1.5e-35 152.5 92 81.5
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 2.6e-35 151.8 92 79.3
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 2.6e-35 151.8 92 80.4
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 2.6e-35 151.8 92 80.4
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 3.4e-35 151.4 92 79.3
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 3.4e-35 151.4 92 78.3
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 3.4e-35 151.4 92 78.3
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 5.8e-35 150.6 93 78.5
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 5.8e-35 150.6 92 78.3
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 7.6e-35 150.2 92 78.3
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 7.6e-35 150.2 92 78.3
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 9.9e-35 149.8 92 78.3
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 9.9e-35 149.8 92 81.5
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 9.9e-35 149.8 92 80.4
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 1.3e-34 149.4 91 79.1
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 1.7e-34 149.1 93 77.4
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 2.2e-34 148.7 92 77.2
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 2.2e-34 148.7 92 78.3
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 2.9e-34 148.3 92 79.3
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 3.8e-34 147.9 92 78.3
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 4.9e-34 147.5 93 76.3
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 1.1e-33 146.4 96 75.0
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 1.1e-33 146.4 96 75.0
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 1.4e-33 146.0 92 77.2
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 1.9e-33 145.6 89 78.7
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 1.9e-33 145.6 89 78.7
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.9e-33 145.6 82 82.9
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 5.5e-33 144.1 95 76.8
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 5.5e-33 144.1 89 76.4
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 7.1e-33 143.7 85 80.0
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 9.3e-33 143.3 92 75.0
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 9.3e-33 143.3 89 77.5
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 9.3e-33 143.3 79 84.8
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 9.3e-33 143.3 93 75.3
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 9.3e-33 143.3 89 75.3
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 1.2e-32 142.9 88 76.1
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 1.2e-32 142.9 89 77.5
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 2.1e-32 142.1 96 70.8
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 2.7e-32 141.7 85 76.5
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 2.7e-32 141.7 92 73.9
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 3.5e-32 141.4 90 75.6
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 3.5e-32 141.4 85 77.6
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 3.5e-32 141.4 88 73.9
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 4.6e-32 141.0 95 71.6
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 4.6e-32 141.0 87 77.0
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 6.0e-32 140.6 89 75.3
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 6.0e-32 140.6 90 74.4
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 7.9e-32 140.2 98 71.4
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 7.9e-32 140.2 87 77.0
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 1.0e-31 139.8 88 75.0
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 1.3e-31 139.4 87 77.0
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 1.8e-31 139.0 96 69.8
CSS0046041 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 1.8e-31 139.0 117 63.2
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 1.8e-31 139.0 96 69.8
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 1.8e-31 139.0 97 70.1
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 2.3e-31 138.7 89 75.3
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 3.9e-31 137.9 96 68.8
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 3.9e-31 137.9 90 72.2
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 3.9e-31 137.9 83 75.9
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 5.1e-31 137.5 94 71.3
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 5.1e-31 137.5 93 74.2
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 5.1e-31 137.5 89 70.8
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 6.7e-31 137.1 89 74.2
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 6.7e-31 137.1 89 74.2
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 6.7e-31 137.1 78 82.1
Lj2A895T22 Lonicera japonica HOM05D001598 ORTHO05D007192 1.5e-30 136.0 113 62.8
HPP92_013448 Vanilla planifolia HOM05D001598 ORTHO05D007192 1.5e-30 136.0 91 68.1
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 1.9e-30 135.6 89 73.0
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 3.3e-30 134.8 91 67.0
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 4.3e-30 134.4 98 67.3
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 4.3e-30 134.4 98 67.3
BcaB08g37328 Brassica carinata HOM05D001598 ORTHO05D007192 2.1e-29 132.1 91 70.3
SEGI_37017 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 3.7e-29 131.3 91 69.2
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 6.2e-29 130.6 83 73.5
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 1.5e-27 125.9 78 78.2
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 2.0e-27 125.6 94 66.0
SEGI_32063 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 2.6e-27 125.2 90 67.8
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 2.2e-26 122.1 91 64.8
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 3.8e-26 121.3 76 73.7
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 1.2e-24 116.3 98 60.2
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 2.7e-24 115.2 98 61.2
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 6.0e-24 114.0 96 61.5
BcaB08g37330 Brassica carinata HOM05D001598 ORTHO05D007192 3.9e-23 111.3 76 71.1
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 4.3e-22 107.8 73 61.6
TAR374G1328 Trochodendron aralioides HOM05D001598 ORTHO05D007192 1.3e-18 96.3 54 87.0
BcaC04g19497 Brassica carinata HOM05D001598 ORTHO05D007192 1.4e-17 92.8 83 59.0
CBR_g53769 Chara braunii HOM05D000019 ORTHO05D000002 7.4e-14 80.5 61 63.9
MCO03G199 Micromonas commoda HOM05D001598 ORTHO05D007192 5.7e-06 54.3 49 51.0


User provided reference genes

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