Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 1.0e-89 333.6 193 100.0
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 6.1e-50 201.4 184 56.5
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 1.4e-49 200.3 191 57.6
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 2.6e-48 196.1 184 59.8
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 7.0e-46 188.0 185 57.3
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 2.0e-45 186.4 186 60.8
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 2.7e-45 186.0 192 53.1
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 2.7e-45 186.0 197 56.9
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 2.2e-44 183.0 186 61.8
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 6.5e-44 181.4 168 63.7
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 7.2e-43 177.9 193 52.3
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 1.2e-42 177.2 177 54.2
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 2.3e-41 172.9 175 53.7
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 6.8e-41 171.4 170 55.9
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 8.8e-41 171.0 183 51.9
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 2.0e-40 169.9 170 54.1
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 3.4e-40 169.1 202 52.0
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 3.4e-40 169.1 170 55.3
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 4.4e-40 168.7 193 55.4
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 5.7e-40 168.3 188 55.3
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 9.8e-40 167.5 186 54.8
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 9.8e-40 167.5 184 52.2
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 1.7e-39 166.8 189 55.0
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 3.7e-39 165.6 182 50.5
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.1e-38 164.1 190 56.8
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 3.1e-38 162.5 161 52.8
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 4.1e-38 162.2 191 49.2
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 5.4e-38 161.8 156 55.1
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 5.4e-38 161.8 184 49.5
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 1.6e-37 160.2 188 52.7
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 2.0e-37 159.8 178 48.9
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 2.7e-37 159.5 184 47.8
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 2.7e-37 159.5 147 55.8
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 4.5e-37 158.7 191 55.5
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 4.5e-37 158.7 194 46.9
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.9e-37 158.3 181 49.2
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 7.7e-37 157.9 178 48.3
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 7.7e-37 157.9 163 50.3
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 1.0e-36 157.5 165 52.1
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.3e-36 157.1 194 47.4
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 1.7e-36 156.8 84 83.3
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 2.9e-36 156.0 89 79.8
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 3.8e-36 155.6 192 45.8
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 5.0e-36 155.2 188 46.8
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 5.0e-36 155.2 186 46.2
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 6.6e-36 154.8 178 48.9
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 1.1e-35 154.1 197 47.2
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.9e-35 153.3 174 48.9
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.9e-35 153.3 174 48.9
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 2.5e-35 152.9 128 58.6
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 4.2e-35 152.1 169 49.7
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 4.2e-35 152.1 176 48.3
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 4.2e-35 152.1 194 54.1
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 5.5e-35 151.8 174 48.3
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 9.5e-35 151.0 150 56.0
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 1.2e-34 150.6 179 48.6
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 1.2e-34 150.6 85 78.8
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 2.8e-34 149.4 174 48.9
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 2.8e-34 149.4 178 52.8
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.8e-34 149.4 178 52.8
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 2.8e-34 149.4 175 51.4
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 3.6e-34 149.1 150 55.3
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 4.7e-34 148.7 179 48.0
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 8.9e-33 144.4 179 43.6
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 1.2e-32 144.1 156 58.3
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 4.4e-32 142.1 144 54.2
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 5.7e-32 141.7 235 43.0
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 7.5e-32 141.4 179 44.1
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 1.3e-31 140.6 179 44.1
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 4.9e-31 138.7 225 48.9
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 6.3e-31 138.3 150 51.3
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 8.3e-31 137.9 80 75.0
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 1.1e-30 137.5 114 58.8
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 5.4e-30 135.2 152 48.7
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 9.2e-30 134.4 145 51.0
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 1.2e-29 134.0 152 48.7
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 2.0e-29 133.3 219 40.6
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 7.8e-29 131.3 187 43.3
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 2.3e-28 129.8 159 47.2
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 1.1e-27 127.5 205 45.4
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 1.1e-27 127.5 78 71.8
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 1.5e-27 127.1 204 41.2
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 2.5e-27 126.3 78 75.6
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 3.3e-27 125.9 204 41.2
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 4.3e-27 125.6 76 68.4
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 7.3e-27 124.8 205 39.5
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 1.2e-26 124.0 201 44.3
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 1.2e-26 124.0 201 44.3
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 2.1e-26 123.2 185 40.5
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 2.1e-26 123.2 206 39.3
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 2.1e-26 123.2 202 39.1
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 2.8e-26 122.9 206 39.8
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 2.8e-26 122.9 206 39.8
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 2.8e-26 122.9 206 39.8
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 2.8e-26 122.9 210 38.1
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 2.8e-26 122.9 78 74.4
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 8.0e-26 121.3 177 50.3
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 8.0e-26 121.3 177 50.3
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 1.4e-25 120.6 203 37.4
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 2.3e-25 119.8 209 38.3
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.3e-25 119.8 70 72.9
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 4.0e-25 119.0 200 49.5
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 8.9e-25 117.9 84 66.7
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 8.9e-25 117.9 84 66.7
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 8.9e-25 117.9 84 66.7
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 1.2e-24 117.5 202 48.0
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 3.4e-24 115.9 137 46.7
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 5.8e-24 115.2 66 71.2
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 5.8e-24 115.2 66 71.2
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 7.5e-24 114.8 79 64.6
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 2.7e-21 106.3 179 37.4
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 8.6e-20 101.3 192 37.5
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 1.6e-18 97.1 73 54.8
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 2.1e-18 96.7 185 33.5
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 3.6e-18 95.9 185 33.5
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 1.3e-15 87.4 62 58.1
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 1.3e-15 87.4 62 58.1
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 1.3e-15 87.4 70 51.4
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 8.3e-15 84.7 186 35.5
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 4.6e-13 79.0 42 78.6
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 1.3e-12 77.4 136 41.9
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.2e-10 70.9 50 72.0
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 1.6e-10 70.5 59 54.2
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 3.6e-10 69.3 53 54.7
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 3.1e-09 66.2 42 73.8
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 3.1e-09 66.2 42 73.8
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 2.6e-08 63.2 36 69.4
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 3.7e-07 59.3 63 52.4


User provided reference genes

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