Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 5.6e-264 913.7 446 100.0
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 1.3e-156 557.0 429 63.6
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 2.0e-152 543.1 424 64.6
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 1.6e-149 533.5 425 63.3
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 6.0e-149 531.6 426 62.4
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 2.8e-146 522.7 418 62.4
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 1.4e-145 520.4 406 65.5
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 8.9e-145 517.7 421 62.5
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 1.5e-144 516.9 422 61.4
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.3e-143 513.8 421 62.0
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 8.3e-143 511.1 433 60.0
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.9e-142 510.0 423 62.4
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 4.1e-142 508.8 415 60.2
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 5.4e-142 508.4 424 60.4
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 4.6e-141 505.4 423 60.0
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 3.0e-140 502.7 418 60.5
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 2.5e-139 499.6 421 60.8
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 4.3e-139 498.8 415 61.0
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 7.3e-139 498.0 415 60.7
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 3.6e-138 495.7 422 59.7
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 3.6e-138 495.7 424 59.4
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 1.1e-137 494.2 413 59.8
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 8.9e-137 491.1 433 58.4
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 1.5e-136 490.3 423 60.0
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 4.4e-136 488.8 424 58.7
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 1.7e-135 486.9 421 58.2
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 1.9e-134 483.4 447 55.7
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 4.1e-134 482.3 420 57.6
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 2.1e-133 479.9 423 57.0
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 1.0e-132 477.6 411 59.6
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 1.3e-132 477.2 425 58.6
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 1.1e-131 474.2 424 57.8
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 9.5e-131 471.1 417 59.2
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 1.6e-130 470.3 413 59.1
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 1.1e-129 467.6 429 57.3
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 1.1e-129 467.6 425 57.2
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 1.8e-129 466.8 424 56.4
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 8.9e-129 464.5 415 56.4
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 8.9e-129 464.5 407 58.2
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 1.2e-128 464.2 537 48.2
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 1.5e-128 463.8 413 57.1
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 1.5e-128 463.8 402 59.0
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 2.6e-128 463.0 413 57.6
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 1.3e-127 460.7 413 56.7
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 2.2e-127 459.9 418 56.9
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 2.2e-127 459.9 418 56.7
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 4.9e-127 458.8 447 55.0
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 4.9e-127 458.8 447 55.0
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 6.4e-127 458.4 419 55.8
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 1.4e-126 457.2 419 56.1
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 1.9e-126 456.8 471 53.1
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 3.2e-126 456.1 418 55.5
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 3.2e-126 456.1 421 57.0
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 3.2e-126 456.1 444 53.8
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 3.2e-126 456.1 415 57.8
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 5.4e-126 455.3 425 56.0
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 9.2e-126 454.5 408 57.4
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 2.7e-125 453.0 431 55.5
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 4.6e-125 452.2 422 56.2
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 6.0e-125 451.8 414 56.0
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 7.8e-125 451.4 457 52.5
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 1.0e-124 451.1 441 55.3
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 1.7e-124 450.3 421 55.6
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 3.0e-124 449.5 414 55.3
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 5.1e-124 448.7 420 56.7
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 5.1e-124 448.7 412 56.6
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 1.9e-123 446.8 439 54.9
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 2.5e-123 446.4 321 67.6
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 3.3e-123 446.0 433 52.4
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 5.6e-123 445.3 418 56.7
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 2.8e-122 443.0 423 55.6
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 1.8e-121 440.3 411 55.7
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 1.8e-121 440.3 420 55.2
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 4.0e-121 439.1 418 55.3
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 4.0e-121 439.1 412 55.3
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 7.8e-117 424.9 378 58.7
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 1.1e-115 421.0 379 58.3
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 2.0e-112 410.2 374 58.8
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 4.5e-112 409.1 421 52.7
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 8.4e-111 404.8 364 55.5
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.0e-108 397.9 418 51.7
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.5e-107 394.0 426 50.5
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 9.6e-107 391.3 397 51.4
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 1.3e-103 380.9 446 48.0
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 4.9e-103 379.0 385 54.5
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 1.1e-102 377.9 335 58.2
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 2.1e-101 373.6 416 49.5
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 3.7e-98 362.8 381 50.9
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 1.8e-97 360.5 351 56.4
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 5.3e-97 359.0 433 44.8
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 2.3e-92 343.6 404 47.5
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 4.3e-91 339.3 352 53.1
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 4.3e-91 339.3 434 44.2
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 1.5e-83 314.3 355 46.5
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 4.7e-77 292.7 289 50.5
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.8e-73 280.8 334 47.6
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.0e-71 275.0 348 44.5
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 9.4e-70 268.5 295 47.8
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 4.4e-59 233.0 161 66.5
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 2.0e-56 224.2 197 55.3
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 2.1e-53 214.2 225 54.2
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 1.2e-48 198.4 393 32.1
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 4.5e-48 196.4 223 52.0
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 3.7e-42 176.8 219 44.7
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.6e-24 118.2 166 42.8
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 2.3e-23 114.4 82 64.6
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 1.1e-20 105.5 160 40.0
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 8.9e-20 102.4 172 44.8
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 2.7e-16 90.9 62 62.9
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.8e-12 78.2 242 28.5
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 6.4e-10 69.7 53 64.2
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 6.0e-08 63.2 121 39.7
BolC8t49566H Brassica oleracea HOM05D040593 ORTHO05D033422 1.9e-06 58.2 35 68.6


User provided reference genes

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