Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 6.7e-79 297.4 157 100.0
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 1.4e-31 140.2 105 72.4
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 6.7e-31 137.9 108 71.3
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 6.7e-31 137.9 100 75.0
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 1.7e-29 133.3 105 70.5
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 2.2e-29 132.9 105 69.5
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 6.3e-29 131.3 108 66.7
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 1.4e-28 130.2 105 69.5
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 1.8e-28 129.8 105 69.5
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 4.1e-28 128.6 108 64.8
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 7.0e-28 127.9 103 68.0
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 9.1e-28 127.5 105 69.5
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 1.2e-27 127.1 106 64.2
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 2.0e-27 126.3 97 70.1
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 2.7e-27 125.9 104 68.3
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 2.7e-27 125.9 109 67.0
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 4.5e-27 125.2 94 74.5
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.0e-26 124.0 100 68.0
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 1.0e-26 124.0 100 68.0
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.0e-26 124.0 99 70.7
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.0e-26 124.0 99 66.7
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 1.3e-26 123.6 108 64.8
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 1.3e-26 123.6 100 71.0
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 2.2e-26 122.9 102 66.7
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 2.2e-26 122.9 106 66.0
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 2.2e-26 122.9 103 66.0
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 3.8e-26 122.1 105 61.9
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 5.0e-26 121.7 109 66.1
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 5.0e-26 121.7 102 65.7
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 6.5e-26 121.3 103 64.1
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 6.5e-26 121.3 103 64.1
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 6.5e-26 121.3 101 65.3
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 6.5e-26 121.3 101 65.3
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 6.5e-26 121.3 109 63.3
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 6.5e-26 121.3 129 56.6
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 6.5e-26 121.3 105 63.8
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 6.5e-26 121.3 109 65.1
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 8.5e-26 120.9 101 65.3
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.1e-25 120.6 102 63.7
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 1.1e-25 120.6 98 68.4
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.1e-25 120.6 100 68.0
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 1.1e-25 120.6 112 59.8
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 1.9e-25 119.8 104 67.3
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 1.9e-25 119.8 108 62.0
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.9e-25 119.8 103 67.0
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 2.5e-25 119.4 101 65.3
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 3.2e-25 119.0 100 65.0
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 4.2e-25 118.6 94 70.2
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 5.5e-25 118.2 102 62.7
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 5.5e-25 118.2 102 62.7
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 5.5e-25 118.2 98 65.3
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 7.2e-25 117.9 100 65.0
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 7.2e-25 117.9 109 62.4
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 1.2e-24 117.1 102 63.7
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 1.2e-24 117.1 100 67.0
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 2.7e-24 115.9 96 65.6
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 3.6e-24 115.5 100 63.0
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 3.6e-24 115.5 101 65.3
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 1.4e-23 113.6 90 71.1
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 1.4e-23 113.6 90 70.0
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 3.0e-23 112.5 100 62.0
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 4.0e-23 112.1 101 64.4
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 5.2e-23 111.7 101 61.4
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.2e-22 110.5 100 59.0
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 2.6e-22 109.4 108 56.5
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 4.4e-22 108.6 101 59.4
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 4.4e-22 108.6 100 61.0
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 7.5e-22 107.8 101 60.4
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 9.8e-22 107.5 96 59.4
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 1.3e-21 107.1 108 55.6
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 2.2e-21 106.3 99 57.6
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 2.2e-21 106.3 101 57.4
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 4.8e-21 105.1 96 57.3
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 4.8e-21 105.1 96 57.3
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 6.3e-21 104.8 93 60.2
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 1.8e-20 103.2 99 56.6
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 1.8e-20 103.2 99 56.6
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 1.8e-20 103.2 99 55.6
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 4.1e-20 102.1 99 55.6
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 4.1e-20 102.1 99 55.6
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 5.4e-20 101.7 99 55.6
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 9.1e-20 100.9 105 57.1
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 9.1e-20 100.9 99 57.6
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 1.2e-19 100.5 101 54.5
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 2.7e-19 99.4 160 43.1
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 3.5e-19 99.0 72 75.0
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 1.7e-18 96.7 105 51.4
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 3.8e-18 95.5 78 69.2
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 8.6e-18 94.4 72 70.8
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 1.9e-17 93.2 78 66.7
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 4.2e-17 92.0 125 45.6
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 9.5e-17 90.9 117 47.0
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 1.2e-16 90.5 79 65.8
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 6.1e-16 88.2 94 54.3
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.8e-15 86.7 60 76.7
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 5.2e-15 85.1 89 58.4
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 1.5e-14 83.6 75 64.0
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 4.9e-13 78.6 78 53.8
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 8.3e-13 77.8 60 68.3
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 9.2e-12 74.3 100 48.0
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 1.2e-11 73.9 98 42.9
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 2.9e-10 69.3 102 40.2
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 1.5e-09 67.0 123 37.4


User provided reference genes

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