Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02556 Nelumbo nucifera HOM05D004913 ORTHO05D006150 1.5e-168 596.3 335 100.0
TAR636G2191 Trochodendron aralioides HOM05D004913 ORTHO05D006150 3.6e-122 442.2 327 79.5
Duzib052G0554 Durio zibethinus HOM05D004913 ORTHO05D006150 1.4e-118 430.3 340 75.6
GSVIVG01018096001 Vitis vinifera HOM05D004913 ORTHO05D006150 1.8e-118 429.9 338 76.3
Thecc.04G244000 Theobroma cacao HOM05D004913 ORTHO05D006150 2.0e-117 426.4 340 74.4
MBI11_g38514_MAGBIO Magnolia biondii HOM05D004913 ORTHO05D006150 4.2e-115 418.7 340 74.7
CiPaw.02G117800 Carya illinoinensis HOM05D004913 ORTHO05D006150 3.0e-113 412.5 338 73.7
vmacro15402 Vaccinium macrocarpon HOM05D004913 ORTHO05D006150 4.8e-111 405.2 346 70.8
CSS0025455 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D006150 2.2e-108 396.4 349 70.8
Cpa.g.sc58.23 Carica papaya HOM05D004913 ORTHO05D006150 5.0e-108 395.2 336 72.0
RcHm_v2.0_Chr5g0043971 Rosa chinensis HOM05D004913 ORTHO05D006150 5.0e-108 395.2 338 72.2
CSS0009777 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D003182 2.6e-104 382.9 333 70.6
Duzib151G0562 Durio zibethinus HOM05D004913 ORTHO05D006150 2.6e-104 382.9 338 68.9
Potri.008G160800 Populus trichocarpa HOM05D004913 ORTHO05D006150 7.5e-104 381.3 344 70.1
MD13G1204100 Malus domestica HOM05D004913 ORTHO05D006150 1.7e-103 380.2 355 68.7
CsaV3_3G012680 Cucumis sativus L. HOM05D004913 ORTHO05D006150 2.2e-103 379.8 339 70.5
Manes.15G035800 Manihot esculenta HOM05D004913 ORTHO05D006150 2.8e-103 379.4 293 75.1
Prupe.1G027200 Prunus persica HOM05D004913 ORTHO05D006150 1.1e-102 377.5 351 69.2
QL06p015098 Quercus lobata HOM05D004913 ORTHO05D006150 1.8e-102 376.7 342 68.7
PGR004G2231 Punica granatum HOM05D004913 ORTHO05D006150 2.7e-101 372.9 341 68.3
Ciclev10005381m.g Citrus clementina HOM05D004913 ORTHO05D006150 3.5e-101 372.5 340 69.4
CANSAT78G1520 Cannabis sativa HOM05D004913 ORTHO05D006150 5.0e-100 368.6 365 67.7
FvH4_3g24470 Fragaria vesca HOM05D004913 ORTHO05D006150 1.5e-99 367.1 339 69.0
ATR0665G449 Amborella trichopoda HOM05D004913 ORTHO05D006150 3.2e-99 365.9 348 66.1
Gohir.D10G152000 Gossypium hirsutum HOM05D004913 ORTHO05D006150 4.2e-99 365.5 340 67.1
Manes.03G170000 Manihot esculenta HOM05D004913 ORTHO05D006150 9.5e-99 364.4 341 68.6
MELO3C006479.2 Cucumis melo HOM05D004913 ORTHO05D006150 3.6e-98 362.5 375 63.7
Gorai.011G170500 Gossypium raimondii HOM05D004913 ORTHO05D006150 3.6e-98 362.5 349 65.9
MD16G1206200 Malus domestica HOM05D004913 ORTHO05D006150 1.0e-97 360.9 350 66.6
Sabra08G0122700 Salix brachista HOM05D004913 ORTHO05D006150 1.4e-97 360.5 311 72.3
Gohir.A10G114500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 5.2e-97 358.6 347 65.4
Oeu032612.1 Olea europaea HOM05D004913 ORTHO05D006150 5.2e-97 358.6 341 65.1
Eucgr.H03172 Eucalyptus grandis HOM05D004913 ORTHO05D006150 1.5e-96 357.1 335 66.0
Sed0027984 Sechium edule HOM05D004913 ORTHO05D006150 5.7e-96 355.1 340 68.8
Potri.010G078500 Populus trichocarpa HOM05D004913 ORTHO05D006150 2.8e-95 352.8 295 72.5
Rhsim02G0032600 Rhododendron simsii HOM05D004913 ORTHO05D006150 6.3e-95 351.7 347 65.7
Lj5g0012164 Lotus japonicus HOM05D004913 ORTHO05D006150 1.1e-94 350.9 340 67.9
Dinv44614 Davidia involucrata HOM05D004913 ORTHO05D006150 2.4e-94 349.7 341 66.3
Haze_11271 Corylus avellana HOM05D004913 ORTHO05D006150 4.1e-94 349.0 292 71.2
Sed0018032 Sechium edule HOM05D004913 ORTHO05D003182 9.2e-94 347.8 335 65.4
FAN11G1852 Fragaria x ananassa HOM05D004913 ORTHO05D006150 2.7e-93 346.3 339 66.4
TWI09G0491 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 4.5e-93 345.5 339 65.5
Gorai.006G070100 Gossypium raimondii HOM05D004913 ORTHO05D006150 1.9e-91 340.1 287 70.4
CDE07G0872 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 3.6e-90 335.9 332 63.9
THA.LOC104815979 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 4.7e-90 335.5 340 63.8
arahy.Tifrunner.gnm1.ann1.8JLR9N Arachis hypogaea HOM05D004913 ORTHO05D006150 3.0e-89 332.8 333 66.4
VMungo0720G1087 Vigna mungo HOM05D004913 ORTHO05D006150 4.0e-89 332.4 326 67.2
MSTRG.21888 Avicennia marina HOM05D004913 ORTHO05D006150 8.9e-89 331.3 345 64.1
SGA_v2.0_scaffold101G29779 Striga asiatica HOM05D004913 ORTHO05D006150 4.4e-88 328.9 321 66.0
Phvul.003G138434 Phaseolus vulgaris HOM05D004913 ORTHO05D006150 7.5e-88 328.2 328 67.1
PSO832G0934 Papaver somniferum HOM05D004913 ORTHO05D006150 9.8e-88 327.8 361 59.6
Gohir.A09G057300 Gossypium hirsutum HOM05D004913 ORTHO05D006150 8.3e-87 324.7 339 62.2
THA.LOC104826068 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 1.1e-86 324.3 261 71.3
PSO210G5612 Papaver somniferum HOM05D004913 ORTHO05D006150 1.2e-85 320.9 306 65.0
Glyma.10G179800 Glycine max HOM05D004913 ORTHO05D006150 1.3e-84 317.4 280 70.0
HanXRQChr12g0381181 Helianthus annuus HOM05D004913 ORTHO05D006150 1.5e-83 313.9 338 62.4
arahy.Tifrunner.gnm1.ann1.9S1KBE Arachis hypogaea HOM05D004913 ORTHO05D006150 2.5e-83 313.2 332 64.2
AUR62041210 Chenopodium quinoa HOM05D004913 ORTHO05D006150 7.3e-83 311.6 339 61.9
Psat6g114920 Pisum sativum HOM05D004913 ORTHO05D006150 9.5e-83 311.2 378 57.4
BolC7t43157H Brassica oleracea HOM05D004913 ORTHO05D006150 2.1e-82 310.1 372 57.5
Sp2g08510 Schrenkiella parvula HOM05D004913 ORTHO05D006150 2.1e-82 310.1 303 64.0
Lalb_Chr06g0168981 Lupinus albus HOM05D004913 ORTHO05D006150 4.7e-82 308.9 296 66.9
C07p26280 Brassica napus HOM05D004913 ORTHO05D006150 6.2e-82 308.5 372 57.3
Carub.0001s0342 Capsella rubella HOM05D004913 ORTHO05D006150 8.0e-82 308.1 341 58.9
EL10Ac4g07493 Beta vulgaris HOM05D004913 ORTHO05D006150 1.4e-81 307.4 325 60.9
Migut.N00232 Erythranthe guttata HOM05D004913 ORTHO05D006150 2.3e-81 306.6 351 60.1
AL1G13830 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 1.2e-80 304.3 301 62.8
DCAR_030710 Daucus carota HOM05D004913 ORTHO05D006150 1.2e-80 304.3 342 61.7
Glyma.20G210600 Glycine max HOM05D004913 ORTHO05D006150 2.0e-80 303.5 296 66.2
Aqoxy2G03527 Aquilegia oxysepala HOM05D004913 ORTHO05D006150 1.7e-79 300.4 286 66.8
AT1G04230 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 4.9e-79 298.9 301 62.1
Lsat_1_v5_gn_5_67500 Lactuca sativa HOM05D004913 ORTHO05D006150 4.9e-79 298.9 351 59.3
AT5G43720 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 1.1e-78 297.7 352 57.4
AL37U10050 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 2.4e-78 296.6 300 62.7
Ca_09877_v3 Cicer arietinum L. HOM05D004913 ORTHO05D006150 2.4e-78 296.6 256 70.7
CDE04G3353 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 5.4e-78 295.4 332 57.8
Lalb_Chr21g0311951 Lupinus albus HOM05D004913 ORTHO05D006150 1.6e-77 293.9 296 63.9
TWI73G0814 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 1.0e-76 291.2 338 59.5
BolC2t10451H Brassica oleracea HOM05D004913 ORTHO05D006150 3.0e-76 289.7 343 58.0
Carub.0008s0491 Capsella rubella HOM05D004913 ORTHO05D006150 2.5e-75 286.6 303 60.1
ECA233G3913 Erigeron canadensis HOM05D004913 ORTHO05D006150 3.3e-75 286.2 361 57.3
Lj3A719T118 Lonicera japonica HOM05D004913 ORTHO05D006150 3.3e-75 286.2 395 53.7
Gohir.D09G056500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 5.6e-75 285.4 241 69.7
Medtr1g076290 Medicago truncatula HOM05D004913 ORTHO05D006150 9.5e-75 284.6 395 53.9
CARHR003560 Cardamine hirsuta HOM05D004913 ORTHO05D006150 1.2e-74 284.3 342 57.3
Sopen09g032190 Solanum pennellii HOM05D004913 ORTHO05D006150 2.1e-74 283.5 338 58.0
Solyc09g083270.4 Solanum lycopersicum HOM05D004913 ORTHO05D006150 3.6e-74 282.7 338 58.0
AUR62040390 Chenopodium quinoa HOM05D004913 ORTHO05D006150 8.1e-74 281.6 289 62.6
FAN25G1200 Fragaria x ananassa HOM05D004913 ORTHO05D006150 8.9e-73 278.1 268 65.3
FAN25G2316 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.2e-72 277.7 268 64.9
CAN.G626.13 Capsicum annuum HOM05D004913 ORTHO05D006150 2.9e-71 273.1 338 56.5
COL.COLO4_15768 Corchorus olitorius HOM05D000979 ORTHO05D003182 5.4e-70 268.9 338 54.1
FAN21G0973 Fragaria x ananassa HOM05D004913 ORTHO05D006150 4.6e-69 265.8 268 63.4
PGSC0003DMG400006092 Solanum tuberosum HOM05D004913 ORTHO05D006150 8.6e-68 261.5 325 56.0
Actinidia05471 Actinidia chinensis HOM05D004913 ORTHO05D006150 1.5e-67 260.8 293 59.0
FAN16G1149 Fragaria x ananassa HOM05D004913 ORTHO05D006150 9.5e-67 258.1 220 70.5
CDE07G2030 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 3.1e-65 253.1 333 53.2
BcaC06g31682 Brassica carinata HOM05D004913 ORTHO05D006150 6.8e-65 251.9 372 51.3
A06p47740 Brassica napus HOM05D004913 ORTHO05D006150 2.2e-63 246.9 363 52.1
Peaxi162Scf01416g00120 Petunia axillaris HOM05D004913 ORTHO05D006150 2.2e-63 246.9 348 51.7
BraA06t27642Z Brassica rapa HOM05D004913 ORTHO05D006150 1.4e-62 244.2 363 51.8
CARHR179900 Cardamine hirsuta HOM05D004913 ORTHO05D006150 1.9e-62 243.8 212 67.9
Thhalv10003245m.g Eutrema salsugineum HOM05D004913 ORTHO05D006150 3.2e-62 243.0 258 59.7
CDE06G2453 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 1.2e-61 241.1 245 61.2
A02p27910 Brassica napus HOM05D004913 ORTHO05D006150 1.6e-61 240.7 340 52.6
BraA02t07829Z Brassica rapa HOM05D004913 ORTHO05D006150 1.6e-61 240.7 340 52.6
HPP92_014140 Vanilla planifolia HOM05D004913 ORTHO05D006150 2.1e-61 240.4 255 60.8
Nitab4.5_0000525g0090 Nicotiana tabacum HOM05D004913 ORTHO05D006150 6.0e-61 238.8 349 50.7
Aa31LG5G3520 Aethionema arabicum HOM05D004913 ORTHO05D006150 7.8e-61 238.4 192 70.8
SEGI_31281 Sequoiadendron giganteum HOM05D004913 ORTHO05D006150 8.7e-60 235.0 260 57.3
Nitab4.5_0004203g0050 Nicotiana tabacum HOM05D004913 ORTHO05D006150 1.6e-58 230.7 330 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2200 Anthoceros agrestis HOM05D004913 ORTHO05D006150 6.2e-58 228.8 231 61.0
Migut.G00417 Erythranthe guttata HOM05D004913 ORTHO05D006150 1.4e-57 227.6 421 45.1
TAR365G1176 Trochodendron aralioides HOM05D004913 ORTHO05D006150 3.1e-57 226.5 191 74.9
BcaC03g16589 Brassica carinata HOM05D004913 ORTHO05D006150 6.9e-57 225.3 205 65.4
C02p44080 Brassica napus HOM05D004913 ORTHO05D006150 6.9e-57 225.3 205 65.4
unitig_0.g131 Utricularia gibba HOM05D004913 ORTHO05D006150 6.4e-55 218.8 193 65.3
SalBow3G1711 Salvia bowleyana HOM05D004913 ORTHO05D006150 3.2e-54 216.5 380 45.5
Zm00001eb212900 Zea mays HOM05D004913 ORTHO05D006150 3.2e-54 216.5 338 47.9
Hund17874 Selenicereus undatus HOM05D004913 ORTHO05D006150 6.0e-53 212.2 478 38.9
Cc03_g04640 Coffea canephora HOM05D004913 ORTHO05D006150 1.0e-52 211.5 340 48.8
Os03g0797700 Oryza sativa ssp. japonica HOM05D004913 ORTHO05D006150 6.6e-52 208.8 293 50.5
SHI00581 Sapria himalayana HOM05D004913 ORTHO05D006150 8.7e-52 208.4 337 49.3
PSO238G0009 Papaver somniferum HOM05D004913 ORTHO05D006150 2.4e-49 200.3 432 40.3
Mapoly0010s0154 Marchantia polymorpha HOM05D004913 ORTHO05D006150 5.3e-49 199.1 340 46.8
Pp3c2_37690 Physcomitrium patens HOM05D004913 ORTHO05D006150 6.9e-49 198.7 443 39.1
PSO210G2862 Papaver somniferum HOM05D004913 ORTHO05D006150 2.0e-48 197.2 302 46.7
Sc13g0004930 Simmondsia chinensis HOM05D004913 ORTHO05D006150 1.3e-47 194.5 290 52.1
SMO358G0388 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 2.9e-47 193.4 307 46.9
AL8G16560 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 3.8e-47 193.0 161 68.3
Ah.13g071540 Amaranthus hybridus HOM05D004913 ORTHO05D006150 5.4e-46 189.1 207 61.8
ClCG05G004680 Citrullus lanatus HOM05D000979 ORTHO05D003182 1.4e-41 174.5 292 48.3
BcaC06g34634 Brassica carinata HOM05D004913 ORTHO05D006150 1.1e-38 164.9 145 68.3
BcaC06g34635 Brassica carinata HOM05D004913 ORTHO05D006150 7.4e-27 125.6 208 51.0
Ah.13g071550 Amaranthus hybridus HOM05D004913 ORTHO05D006150 2.7e-21 107.1 95 67.4
CBR_g525 Chara braunii HOM05D004913 ORTHO05D006150 3.6e-21 106.7 142 43.0
SMO347G0406 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 7.9e-21 105.5 164 42.7
Atru.chr4.2281 Acer truncatum HOM05D000979 ORTHO05D003182 2.2e-15 87.4 97 63.9
Zm00001eb034960 Zea mays HOM05D004913 ORTHO05D006150 5.0e-15 86.3 87 58.6
GSVIVG01034858001 Vitis vinifera HOM05D004913 ORTHO05D006150 3.0e-12 77.0 56 71.4
Zm00001eb060940 Zea mays HOM05D004913 ORTHO05D006150 7.7e-08 62.4 80 55.0
MCO11G351 Micromonas commoda HOM05D004913 ORTHO05D006150 3.8e-07 60.1 171 32.2
FAN16G0422 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.9e-06 57.8 119 47.1


User provided reference genes

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