Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.5e-102 376.3 209 100.0
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.4e-60 236.9 181 75.7
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 7.3e-57 224.6 177 74.0
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 5.1e-50 201.8 167 69.5
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.9e-45 186.0 182 63.7
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 6.0e-43 178.3 173 64.2
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.3e-42 176.4 187 60.4
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 1.1e-41 174.1 175 61.7
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 1.1e-41 174.1 158 69.6
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 7.3e-41 171.4 182 59.9
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 4.0e-39 165.6 180 53.9
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 6.9e-39 164.9 174 59.8
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 2.0e-38 163.3 176 59.1
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.7e-37 160.2 173 58.4
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 4.9e-37 158.7 173 56.1
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 6.4e-37 158.3 173 56.6
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 1.1e-36 157.5 179 55.9
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 1.4e-36 157.1 173 59.0
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 3.2e-36 156.0 175 52.6
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 7.1e-36 154.8 177 55.9
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 3.5e-35 152.5 142 67.6
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 1.0e-34 151.0 176 56.2
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 1.3e-34 150.6 131 71.8
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 1.7e-34 150.2 141 68.8
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 2.3e-34 149.8 167 55.1
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 5.1e-34 148.7 178 56.7
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 7.3e-33 144.8 175 49.7
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 7.3e-33 144.8 172 58.1
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 1.6e-32 143.7 177 54.2
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 1.1e-31 141.0 175 54.9
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.1e-31 141.0 175 54.9
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.1e-31 141.0 175 54.9
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 1.8e-31 140.2 136 65.4
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 4.0e-31 139.0 168 55.4
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 9.0e-31 137.9 171 56.1
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 1.2e-30 137.5 166 56.0
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 1.2e-30 137.5 128 68.8
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 1.2e-30 137.5 175 54.3
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 1.5e-30 137.1 176 52.8
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.5e-30 137.1 134 64.9
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 4.5e-30 135.6 166 56.6
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 7.6e-30 134.8 173 53.8
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 1.3e-29 134.0 176 56.2
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 2.9e-29 132.9 179 53.6
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 6.4e-29 131.7 173 56.6
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.4e-28 130.6 168 52.4
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 1.4e-28 130.6 144 62.5
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 1.9e-28 130.2 173 52.6
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 2.4e-28 129.8 146 59.6
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 5.4e-28 128.6 154 56.5
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 5.4e-28 128.6 144 61.8
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.2e-27 127.5 175 52.0
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 1.6e-27 127.1 158 53.2
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.6e-27 127.1 151 57.6
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 1.6e-27 127.1 150 61.3
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 6.0e-27 125.2 181 46.4
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 7.9e-27 124.8 145 58.6
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 1.8e-26 123.6 152 58.6
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 3.0e-26 122.9 152 56.6
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 8.7e-26 121.3 145 57.9
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 1.1e-25 120.9 143 58.7
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 1.1e-25 120.9 152 58.6
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 1.1e-25 120.9 175 47.4
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.1e-25 120.9 143 59.4
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 1.1e-25 120.9 173 50.9
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.5e-25 120.6 169 47.3
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 1.9e-25 120.2 144 61.8
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 2.5e-25 119.8 150 55.3
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 2.5e-25 119.8 173 50.9
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 2.5e-25 119.8 173 50.3
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 3.3e-25 119.4 152 55.9
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 3.3e-25 119.4 173 50.3
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 7.4e-25 118.2 131 57.3
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 9.6e-25 117.9 116 69.0
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 1.3e-24 117.5 147 59.2
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 1.3e-24 117.5 173 48.6
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.6e-24 117.1 150 54.7
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.6e-24 117.1 150 54.7
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 1.6e-24 117.1 150 54.7
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 2.1e-24 116.7 139 59.7
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 6.2e-24 115.2 129 60.5
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.4e-23 114.0 129 59.7
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.4e-23 113.2 155 45.8
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 3.1e-23 112.8 129 59.7
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 4.0e-23 112.5 150 54.0
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 5.3e-23 112.1 174 48.9
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.5e-22 110.5 150 54.0
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 4.9e-21 105.5 166 46.4
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 4.2e-20 102.4 164 46.3
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 7.1e-20 101.7 100 71.0
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 3.0e-18 96.3 118 62.7
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 3.9e-18 95.9 167 44.9
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 1.5e-17 94.0 87 77.0
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 3.3e-17 92.8 93 67.7
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 4.3e-17 92.4 85 74.1
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 4.8e-16 89.0 81 70.4
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 6.2e-16 88.6 120 45.8
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 4.0e-15 85.9 122 50.8
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 5.3e-15 85.5 129 48.1
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 1.9e-12 77.0 94 54.3
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.2e-11 74.3 127 46.5
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 2.1e-11 73.6 82 67.1
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 3.0e-10 69.7 82 62.2
CDE02G3979 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 8.2e-08 61.6 122 32.0


User provided reference genes

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