Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.8e-66 255.8 125 100.0
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.4e-63 245.4 125 95.2
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-60 236.5 125 91.2
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.8e-56 221.1 124 87.9
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-54 216.5 125 87.2
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.9e-53 211.8 125 82.4
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.2e-52 208.0 125 81.6
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-51 206.5 115 86.1
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.2e-48 195.7 125 79.2
Nitab4.5_0004504g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-42 175.6 88 95.5
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.7e-40 169.5 95 85.3
Nitab4.5_0001907g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.8e-39 166.0 110 75.5
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.8e-31 139.4 125 58.4
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-30 136.7 122 59.8
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.5e-30 134.8 113 60.2
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 6.6e-29 131.0 125 54.4
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 2.8e-27 125.6 125 51.2
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 3.6e-27 125.2 123 50.4
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 6.1e-27 124.4 112 54.5
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 1.4e-26 123.2 123 49.6
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 1.4e-26 123.2 123 49.6
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 1.4e-26 123.2 123 49.6
Nitab4.5_0000831g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.4e-25 118.2 95 66.3
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 7.5e-25 117.5 131 45.8
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.7e-24 116.3 84 63.1
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.7e-24 116.3 110 57.3
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 6.4e-24 114.4 104 50.0
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.1e-23 113.6 131 44.3
Nitab4.5_0001107g0130 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.0e-23 110.9 95 63.2
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.0e-22 109.4 83 63.9
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.0e-22 109.4 131 43.5
Nitab4.5_0003194g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.8e-22 107.5 115 56.5
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 7.8e-22 107.5 134 41.0
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.9e-21 105.1 98 45.9
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 1.5e-20 103.2 112 47.3
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 3.3e-20 102.1 101 45.5
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 1.2e-19 100.1 112 46.4
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 1.6e-19 99.8 106 43.4
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 1.1e-18 97.1 106 44.3
CAN.G278.18 Capsicum annuum HOM05D004064 ORTHO05D009909 6.8e-18 94.4 102 46.1
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.8e-17 91.3 104 46.2
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.5e-17 90.9 103 45.6
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.9e-16 88.2 99 43.4
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 8.3e-16 87.4 90 46.7
Nitab4.5_0002649g0140 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.7e-14 82.4 86 52.3
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-14 82.4 106 40.6
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 2.7e-14 82.4 106 40.6
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 2.7e-14 82.4 104 43.3
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 2.7e-14 82.4 106 40.6
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-14 82.0 106 40.6
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 4.6e-14 81.6 106 40.6
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 4.6e-14 81.6 107 41.1
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-13 80.1 106 39.6
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.0e-13 79.0 112 47.3
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 3.9e-13 78.6 103 40.8
Nitab4.5_0000555g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.9e-12 76.3 95 48.4
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 1.9e-12 76.3 106 38.7
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 2.5e-12 75.9 80 46.2
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-10 70.5 86 40.7
PGSC0003DMG400007543 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.1e-10 70.5 124 37.9
Sopen03g016280 Solanum pennellii HOM05D004064 ORTHO05D009909 1.4e-10 70.1 104 39.4
Ah.10g025880 Amaranthus hybridus HOM05D009581 ORTHO05D004107 4.0e-10 68.6 122 32.8
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.8e-10 67.8 60 45.0
CAN.G1724.2 Capsicum annuum HOM05D002537 ORTHO05D002751 3.4e-09 65.5 86 43.0
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 4.4e-09 65.1 77 39.0
Sopen01g007650 Solanum pennellii HOM05D010431 ORTHO05D009909 5.8e-09 64.7 82 45.1
PGSC0003DMG400047205 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.7e-08 63.2 102 36.3
PGSC0003DMG400004105 Solanum tuberosum HOM05D000017 ORTHO05D009909 2.9e-08 62.4 79 43.0
Nitab4.5_0009324g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.3e-08 60.8 91 44.0
Sopen03g026910 Solanum pennellii HOM05D000004 ORTHO05D010855 8.3e-08 60.8 72 45.8
PGSC0003DMG400045567 Solanum tuberosum HOM05D004064 ORTHO05D037746 8.3e-08 60.8 107 38.3
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 1.1e-07 60.5 135 31.9
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 1.9e-07 59.7 132 31.8
CAN.G2504.1 Capsicum annuum HOM05D004064 ORTHO05D009909 2.4e-07 59.3 66 40.9
CAN.G946.2 Capsicum annuum HOM05D000017 ORTHO05D001349 4.1e-07 58.5 100 34.0
Dinv39745 Davidia involucrata HOM05D009581 ORTHO05D004107 4.1e-07 58.5 113 31.9
Peaxi162Scf00384g00027 Petunia axillaris HOM05D006921 ORTHO05D009185 4.1e-07 58.5 130 33.8
TWI09G1270 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.1e-07 58.5 103 35.0
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.4e-07 58.2 98 34.7
Nitab4.5_0009261g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.4e-07 58.2 97 34.0
Peaxi162Scf00062g00106 Petunia axillaris HOM05D006921 ORTHO05D009185 5.4e-07 58.2 132 32.6
PGSC0003DMG400039421 Solanum tuberosum HOM05D005093 ORTHO05D009561 5.4e-07 58.2 50 52.0
Dinv41030 Davidia involucrata HOM05D009581 ORTHO05D004107 9.2e-07 57.4 113 32.7
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.2e-07 57.4 119 31.1
SalBow3G3497 Salvia bowleyana HOM05D012005 ORTHO05D009454 9.2e-07 57.4 90 35.6
Dinv09483 Davidia involucrata HOM05D012890 ORTHO05D004107 1.2e-06 57.0 102 32.4
CAN.G423.33 Capsicum annuum HOM05D004064 ORTHO05D009909 1.6e-06 56.6 63 42.9
TWI53G1859 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.1e-06 56.2 103 34.0
Dinv14622 Davidia involucrata HOM05D015629 ORTHO05D004107 2.7e-06 55.8 96 32.3
Dinv05647 Davidia involucrata HOM05D009581 ORTHO05D004107 4.6e-06 55.1 113 31.9
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 4.6e-06 55.1 47 55.3
Hma1.2p1_0472F.1_g159930 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.0e-06 54.7 123 30.1
Nitab4.5_0005160g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.8e-06 54.3 98 34.7


User provided reference genes

Program Settings