Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0025922g0010 Nicotiana tabacum HOM05D000388 ORTHO05D009843 1.9e-53 212.2 107 100.0
Solyc00g500055.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 2.5e-45 185.3 95 98.9
Solyc00g500137.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 2.5e-45 185.3 95 98.9
Solyc00g500207.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 2.5e-45 185.3 95 98.9
Nitab4.5_0007186g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009843 9.5e-45 183.3 95 96.8
TAR629G1277 Trochodendron aralioides HOM05D000388 ORTHO05D009843 4.4e-42 174.5 95 92.6
CAN.G142.10 Capsicum annuum HOM05D000388 ORTHO05D009843 9.2e-40 166.8 86 97.7
CAN.G500.81 Capsicum annuum HOM05D000388 ORTHO05D009843 9.2e-40 166.8 86 97.7
CAN.G653.5 Capsicum annuum HOM05D000388 ORTHO05D009843 9.2e-40 166.8 86 97.7
Migut.D01348 Erythranthe guttata HOM05D000388 ORTHO05D009843 1.6e-39 166.0 86 96.5
Migut.J01359 Erythranthe guttata HOM05D000388 ORTHO05D009843 1.6e-39 166.0 86 96.5
Potri.013G142336 Populus trichocarpa HOM05D000388 ORTHO05D009843 1.0e-38 163.3 84 97.6
Sed0009296 Sechium edule HOM05D000388 ORTHO05D009843 1.7e-38 162.5 86 94.2
Sed0020360 Sechium edule HOM05D000388 ORTHO05D009843 1.7e-38 162.5 86 94.2
A06p23300 Brassica napus HOM05D000388 ORTHO05D000473 2.3e-38 162.2 95 84.2
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 2.3e-38 162.2 95 84.2
C09p40130 Brassica napus HOM05D000388 ORTHO05D009843 2.3e-38 162.2 95 84.2
BolC7t41727H Brassica oleracea HOM05D000388 ORTHO05D000473 2.3e-38 162.2 95 84.2
BolSC29t60455H Brassica oleracea HOM05D000388 ORTHO05D000473 2.3e-38 162.2 95 84.2
BolSC45t60943H Brassica oleracea HOM05D000388 ORTHO05D000473 2.3e-38 162.2 95 84.2
BolSC46t60990H Brassica oleracea HOM05D000388 ORTHO05D000473 2.3e-38 162.2 95 84.2
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 2.3e-38 162.2 95 84.2
BraSC179t45796Z Brassica rapa HOM05D000388 ORTHO05D000473 2.3e-38 162.2 95 84.2
RcHm_v2.0_CPg0502271 Rosa chinensis HOM05D000388 ORTHO05D009843 2.3e-38 162.2 86 94.2
HanXRQChr00c0272g0573001 Helianthus annuus HOM05D000388 ORTHO05D009843 5.1e-38 161.0 86 94.2
HanXRQChr00c0439g0574751 Helianthus annuus HOM05D000388 ORTHO05D009843 5.1e-38 161.0 86 94.2
HanXRQChr02g0041691 Helianthus annuus HOM05D000388 ORTHO05D009843 5.1e-38 161.0 86 94.2
HanXRQChr04g0099341 Helianthus annuus HOM05D000388 ORTHO05D009843 5.1e-38 161.0 86 94.2
HanXRQChr05g0151391 Helianthus annuus HOM05D000388 ORTHO05D009843 5.1e-38 161.0 86 94.2
HanXRQChr07g0201051 Helianthus annuus HOM05D000388 ORTHO05D009843 5.1e-38 161.0 86 94.2
HanXRQChr08g0210251 Helianthus annuus HOM05D000388 ORTHO05D009843 5.1e-38 161.0 86 94.2
HanXRQChr10g0282451 Helianthus annuus HOM05D000388 ORTHO05D009843 5.1e-38 161.0 86 94.2
HanXRQChr11g0326691 Helianthus annuus HOM05D000388 ORTHO05D009843 5.1e-38 161.0 86 94.2
HanXRQCPg0579911 Helianthus annuus HOM05D000388 ORTHO05D009843 5.1e-38 161.0 86 94.2
Hma1.2p1_0051F.1_g029490 Hydrangea macrophylla HOM05D000388 ORTHO05D009843 6.6e-38 160.6 86 94.2
RcHm_v2.0_Chr3g0491801 Rosa chinensis HOM05D000388 ORTHO05D009843 8.6e-38 160.2 86 91.9
Lalb_Chr23g0270511 Lupinus albus HOM05D000388 ORTHO05D009843 4.3e-37 157.9 86 93.0
Nn020s41509 Nelumbo nucifera HOM05D000388 ORTHO05D009843 4.3e-37 157.9 86 93.0
Nn055s41931 Nelumbo nucifera HOM05D000388 ORTHO05D009843 4.3e-37 157.9 86 93.0
Nn082s42681 Nelumbo nucifera HOM05D000388 ORTHO05D009843 4.3e-37 157.9 86 93.0
Nn287s46145 Nelumbo nucifera HOM05D000388 ORTHO05D009843 4.3e-37 157.9 86 93.0
AL2G20790 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 9.6e-37 156.8 86 89.5
ATCG00330 Arabidopsis thaliana HOM05D000388 ORTHO05D009843 9.6e-37 156.8 86 89.5
BcaC04g20699 Brassica carinata HOM05D000388 ORTHO05D009843 9.6e-37 156.8 86 89.5
arahy.Tifrunner.gnm1.ann1.6B1C4L Arachis hypogaea HOM05D000388 ORTHO05D009843 1.2e-36 156.4 90 87.8
Gohir.D08G129080 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.6e-36 156.0 86 90.7
DCAR_032482 Daucus carota HOM05D000388 ORTHO05D009843 2.1e-36 155.6 86 91.9
CARHR281990 Cardamine hirsuta HOM05D000388 ORTHO05D009843 2.8e-36 155.2 86 88.4
LjContig00318g0006350 Lotus japonicus HOM05D000388 ORTHO05D009843 2.8e-36 155.2 86 90.7
PSO548G0009 Papaver somniferum HOM05D000388 ORTHO05D009843 3.6e-36 154.8 86 90.7
BNapus_Darmor_BZH_scaffold_253p00110 Brassica napus HOM05D000388 ORTHO05D009843 4.7e-36 154.5 86 88.4
BraSC151t45706Z Brassica rapa HOM05D000388 ORTHO05D009843 4.7e-36 154.5 86 88.4
PGR111G0009 Punica granatum HOM05D000388 ORTHO05D009843 4.7e-36 154.5 86 90.7
BolC9t56909H Brassica oleracea HOM05D000388 ORTHO05D009843 8.1e-36 153.7 86 88.4
Peaxi162Scf00455g00046 Petunia axillaris HOM05D000388 ORTHO05D009843 1.1e-35 153.3 80 96.2
Gohir.A03G019500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 5.2e-35 151.0 86 89.5
Gohir.A05G086166 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.2e-34 149.8 86 88.4
AL2G21360 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 1.5e-34 149.4 86 86.0
Thhalv10011029m.g Eutrema salsugineum HOM05D000388 ORTHO05D009843 3.4e-34 148.3 86 87.2
TWI15G0535 Tripterygium wilfordii HOM05D000388 ORTHO05D009843 5.8e-34 147.5 86 86.0
CAN.G679.7 Capsicum annuum HOM05D000388 ORTHO05D009843 7.6e-34 147.1 86 88.4
Gohir.A01G140300 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.9e-32 142.5 86 82.6
Gohir.D09G055500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.9e-32 142.5 102 75.5
EL10Ac1g02280 Beta vulgaris HOM05D000388 ORTHO05D009843 2.4e-32 142.1 86 88.4
Sed0021792 Sechium edule HOM05D000388 ORTHO05D009843 4.2e-32 141.4 86 83.7
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 5.4e-32 141.0 79 91.1
Medtr3g035610 Medicago truncatula HOM05D000388 ORTHO05D009843 1.2e-31 139.8 86 83.7
Oeu062844.1 Olea europaea HOM05D000388 ORTHO05D009843 1.2e-31 139.8 86 82.6
CiPaw.10G111400 Carya illinoinensis HOM05D000388 ORTHO05D009843 6.0e-31 137.5 73 91.8
Gohir.A01G164720 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.0e-30 136.7 85 83.5
LjContig00489g0027265 Lotus japonicus HOM05D000388 ORTHO05D009843 1.7e-30 136.0 87 78.2
BolSC44t60854H Brassica oleracea HOM05D000388 ORTHO05D009843 1.9e-29 132.5 95 69.5
Nitab4.5_0002607g0050 Nicotiana tabacum HOM05D000388 ORTHO05D009843 2.5e-29 132.1 75 93.3
Oeu017222.1 Olea europaea HOM05D000388 ORTHO05D009843 3.3e-29 131.7 86 80.2
SEGI_01256 Sequoiadendron giganteum HOM05D000388 ORTHO05D009843 2.8e-28 128.6 86 76.7
Peaxi162Scf00575g00006 Petunia axillaris HOM05D000388 ORTHO05D009843 2.6e-26 122.1 57 98.2
Eucgr.C02020 Eucalyptus grandis HOM05D000388 ORTHO05D009843 3.4e-26 121.7 78 79.5
Gohir.A07G155821 Gossypium hirsutum HOM05D000388 ORTHO05D009843 7.6e-26 120.6 72 84.7
CAN.G386.18 Capsicum annuum HOM05D000388 ORTHO05D000473 2.9e-25 118.6 59 94.9
arahy.Tifrunner.gnm1.ann1.FC7Y3W Arachis hypogaea HOM05D000388 ORTHO05D009843 4.2e-24 114.8 63 87.3
HanXRQChr16g0506261 Helianthus annuus HOM05D000388 ORTHO05D009843 4.2e-24 114.8 66 90.9
EL10As15g24141 Beta vulgaris HOM05D000388 ORTHO05D009843 1.0e-22 110.2 65 89.2
Hund28396 Selenicereus undatus HOM05D000388 ORTHO05D009843 5.1e-22 107.8 59 89.8
SMO086G0040 Selaginella moellendorffii HOM05D000388 ORTHO05D009843 1.1e-21 106.7 90 60.0
HanXRQChr00c0345g0573851 Helianthus annuus HOM05D000388 ORTHO05D009843 4.2e-16 88.2 41 97.6
Hund29903 Selenicereus undatus HOM05D000388 ORTHO05D009843 1.9e-13 79.3 51 86.3
CsaV3_6G032160 Cucumis sativus L. HOM05D000388 ORTHO05D009843 5.6e-13 77.8 81 60.5
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 1.3e-12 76.6 41 87.8
Medtr8g079770 Medicago truncatula HOM05D000388 ORTHO05D009843 6.2e-12 74.3 51 78.4
Nitab4.5_0002446g0070 Nicotiana tabacum HOM05D000388 ORTHO05D009843 3.1e-11 72.0 42 95.2
Phvul.010G068900 Phaseolus vulgaris HOM05D000388 ORTHO05D009843 3.1e-11 72.0 35 91.4
Medtr5g063380 Medicago truncatula HOM05D000388 ORTHO05D009843 2.6e-10 68.9 35 88.6
arahy.Tifrunner.gnm1.ann1.EPB7VR Arachis hypogaea HOM05D000176 ORTHO05D000106 5.5e-08 61.2 27 96.3
arahy.Tifrunner.gnm1.ann1.90KAHV Arachis hypogaea HOM05D000388 ORTHO05D009843 7.1e-08 60.8 90 47.8
arahy.Tifrunner.gnm1.ann1.A3NG1I Arachis hypogaea HOM05D000388 ORTHO05D009843 7.1e-08 60.8 43 69.8
BolC9t56932H Brassica oleracea HOM05D000388 ORTHO05D009843 1.2e-07 60.1 27 96.3
HanXRQChr00c0586g0576301 Helianthus annuus HOM05D000388 ORTHO05D009843 1.0e-06 57.0 83 48.2


User provided reference genes

Program Settings