Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0018466g0010 Nicotiana tabacum HOM05D004490 ORTHO05D005353 9.7e-98 360.9 224 100.0
Nitab4.5_0002074g0010 Nicotiana tabacum HOM05D004490 ORTHO05D005353 3.6e-84 315.8 223 88.8
Solyc11g018670.3 Solanum lycopersicum HOM05D004490 ORTHO05D005353 2.4e-72 276.6 223 80.3
Sopen11g009650 Solanum pennellii HOM05D004490 ORTHO05D005353 9.8e-66 254.6 208 81.2
CAN.G905.35 Capsicum annuum HOM05D004490 ORTHO05D005353 9.2e-64 248.1 199 80.4
Peaxi162Scf00848g00115 Petunia axillaris HOM05D004490 ORTHO05D005353 8.1e-52 208.4 218 62.4
Dinv41710 Davidia involucrata HOM05D004490 ORTHO05D005353 2.6e-42 176.8 226 50.4
Hma1.2p1_0363F.1_g136650 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 2.6e-42 176.8 226 49.6
Hma1.2p1_0363F.1_g136660 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 2.6e-42 176.8 226 49.6
Migut.C01248 Erythranthe guttata HOM05D004490 ORTHO05D005353 2.1e-36 157.1 192 53.1
Potri.019G083700 Populus trichocarpa HOM05D004490 ORTHO05D005353 1.4e-35 154.5 199 48.2
Oeu021013.3 Olea europaea HOM05D004490 ORTHO05D005353 2.4e-35 153.7 234 47.4
CiPaw.16G061300 Carya illinoinensis HOM05D004490 ORTHO05D005353 9.0e-35 151.8 231 43.7
Manes.02G191800 Manihot esculenta HOM05D004490 ORTHO05D005353 1.2e-34 151.4 196 49.5
Glyma.10G216200 Glycine max HOM05D004490 ORTHO05D005353 1.5e-34 151.0 219 46.6
GSVIVG01034483001 Vitis vinifera HOM05D004490 ORTHO05D005353 2.6e-34 150.2 210 47.6
Sabra19G0095100 Salix brachista HOM05D004490 ORTHO05D005353 4.5e-34 149.4 215 47.4
MSTRG.1522 Avicennia marina HOM05D004490 ORTHO05D005353 7.6e-34 148.7 191 49.7
Lj5g0002115 Lotus japonicus HOM05D004490 ORTHO05D005353 1.7e-33 147.5 198 47.0
Cc10_g11460 Coffea canephora HOM05D004490 ORTHO05D005353 2.2e-33 147.1 214 47.2
SalBow4G3000 Salvia bowleyana HOM05D004490 ORTHO05D005353 8.4e-33 145.2 192 49.0
SalBow7G0993 Salvia bowleyana HOM05D004490 ORTHO05D005353 8.4e-33 145.2 192 49.0
vmacro11670 Vaccinium macrocarpon HOM05D004490 ORTHO05D005353 8.4e-33 145.2 227 44.9
Lj7A289G25 Lonicera japonica HOM05D004490 ORTHO05D005353 1.4e-32 144.4 233 46.4
Cfa018184 Carpinus fangiana HOM05D004490 ORTHO05D005353 2.4e-32 143.7 210 45.7
Prupe.8G058000 Prunus persica HOM05D004490 ORTHO05D005353 2.4e-32 143.7 211 45.5
SGA_v2.0_scaffold118G32473 Striga asiatica HOM05D004490 ORTHO05D005353 2.4e-32 143.7 184 49.5
Haze_17934 Corylus avellana HOM05D004490 ORTHO05D005353 5.4e-32 142.5 210 44.8
EL10Ac1g00080 Beta vulgaris HOM05D004490 ORTHO05D005353 9.3e-32 141.7 187 50.8
Thhalv10028527m.g Eutrema salsugineum HOM05D004490 ORTHO05D005353 1.2e-31 141.4 217 45.6
Atru.chr12.1269 Acer truncatum HOM05D004490 ORTHO05D005353 1.6e-31 141.0 194 48.5
arahy.Tifrunner.gnm1.ann1.2Y7GNB Arachis hypogaea HOM05D004490 ORTHO05D005353 1.6e-31 141.0 196 47.4
arahy.Tifrunner.gnm1.ann1.90XUFN Arachis hypogaea HOM05D004490 ORTHO05D005353 2.1e-31 140.6 196 47.4
HanXRQChr10g0290501 Helianthus annuus HOM05D004490 ORTHO05D005353 2.1e-31 140.6 189 51.9
Oeu039613.1 Olea europaea HOM05D004490 ORTHO05D005353 2.1e-31 140.6 213 46.0
CANSAT64G2929 Cannabis sativa HOM05D004490 ORTHO05D005353 3.5e-31 139.8 198 45.5
THA.LOC104816311 Tarenaya hassleriana HOM05D004490 ORTHO05D005353 3.5e-31 139.8 195 48.2
A09p29500 Brassica napus HOM05D004490 ORTHO05D005353 4.6e-31 139.4 196 48.0
Lalb_Chr21g0305821 Lupinus albus HOM05D004490 ORTHO05D005353 4.6e-31 139.4 202 46.5
AL2G20400 Arabidopsis lyrata HOM05D004490 ORTHO05D005353 7.9e-31 138.7 191 48.7
Glyma.20G175700 Glycine max HOM05D004490 ORTHO05D005353 1.3e-30 137.9 190 45.8
Sc23g0001210 Simmondsia chinensis HOM05D004490 ORTHO05D005353 2.3e-30 137.1 224 43.3
TPR.G8816 Trifolium pratense HOM05D004490 ORTHO05D005353 2.3e-30 137.1 219 51.1
TWI63G0531 Tripterygium wilfordii HOM05D004490 ORTHO05D005353 2.3e-30 137.1 196 45.4
VMungo0720G0360 Vigna mungo HOM05D004490 ORTHO05D005353 2.3e-30 137.1 200 44.5
Lsat_1_v5_gn_5_105541 Lactuca sativa HOM05D004490 ORTHO05D005353 3.0e-30 136.7 236 47.0
RcHm_v2.0_Chr4g0398261 Rosa chinensis HOM05D004490 ORTHO05D005353 3.0e-30 136.7 196 46.9
AT1G65280 Arabidopsis thaliana HOM05D004490 ORTHO05D005353 3.9e-30 136.3 210 45.7
Gorai.013G140400 Gossypium raimondii HOM05D004490 ORTHO05D005353 5.1e-30 136.0 195 47.7
CSS0029963 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 6.7e-30 135.6 203 46.3
MELO3C024104.2 Cucumis melo HOM05D004490 ORTHO05D005353 8.7e-30 135.2 221 43.4
Sp6g08010 Schrenkiella parvula HOM05D004490 ORTHO05D005353 8.7e-30 135.2 200 46.5
Hund27085 Selenicereus undatus HOM05D004490 ORTHO05D005353 8.7e-30 135.2 212 44.8
TAR208G0002 Trochodendron aralioides HOM05D004490 ORTHO05D005353 8.7e-30 135.2 220 44.1
BraA09t38516Z Brassica rapa HOM05D004490 ORTHO05D005353 1.1e-29 134.8 195 47.2
ClCG09G010540 Citrullus lanatus HOM05D004490 ORTHO05D005353 1.1e-29 134.8 224 41.5
Gohir.A13G121400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 1.1e-29 134.8 196 47.4
Phvul.007G089700 Phaseolus vulgaris HOM05D004490 ORTHO05D005353 1.5e-29 134.4 192 46.9
Ca_10614_v3 Cicer arietinum L. HOM05D004490 ORTHO05D005353 1.9e-29 134.0 217 42.9
Gohir.D13G125400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 1.9e-29 134.0 192 47.9
Aa31LG9G14890 Aethionema arabicum HOM05D004490 ORTHO05D005353 2.5e-29 133.7 192 49.0
Psat6g187400 Pisum sativum HOM05D004490 ORTHO05D005353 2.5e-29 133.7 209 44.0
CsaV3_7G024020 Cucumis sativus L. HOM05D004490 ORTHO05D005353 4.3e-29 132.9 197 44.7
Medtr1g096410 Medicago truncatula HOM05D004490 ORTHO05D005353 5.6e-29 132.5 200 44.5
Carub.0002s1095 Capsella rubella HOM05D004490 ORTHO05D005353 9.6e-29 131.7 203 46.8
CARHR056930 Cardamine hirsuta HOM05D004490 ORTHO05D005353 9.6e-29 131.7 213 44.6
PSO063G0599 Papaver somniferum HOM05D004490 ORTHO05D005353 1.3e-28 131.3 191 45.0
FvH4_4g06470 Fragaria vesca HOM05D004490 ORTHO05D005353 2.1e-28 130.6 199 44.7
FAN12G1529 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.1e-28 130.6 199 44.7
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 2.8e-28 130.2 189 46.6
Sed0010515 Sechium edule HOM05D004490 ORTHO05D005353 2.8e-28 130.2 215 42.3
Thecc.08G183200 Theobroma cacao HOM05D004490 ORTHO05D005353 2.8e-28 130.2 195 44.6
Aqoxy2G03181 Aquilegia oxysepala HOM05D004490 ORTHO05D005353 4.8e-28 129.4 213 43.2
BcaC04g20957 Brassica carinata HOM05D004490 ORTHO05D005353 4.8e-28 129.4 195 46.7
BolC9t56586H Brassica oleracea HOM05D004490 ORTHO05D005353 4.8e-28 129.4 195 46.7
Ciclev10000724m.g Citrus clementina HOM05D004490 ORTHO05D005353 4.8e-28 129.4 220 43.2
PSO017G7136 Papaver somniferum HOM05D004490 ORTHO05D005353 1.1e-27 128.3 191 44.0
DCAR_014360 Daucus carota HOM05D004490 ORTHO05D005353 2.4e-27 127.1 188 45.7
PGR102G0893 Punica granatum HOM05D004490 ORTHO05D005353 4.0e-27 126.3 211 44.1
Duzib177G0006 Durio zibethinus HOM05D004490 ORTHO05D005353 5.3e-27 125.9 196 45.4
ECA234G1973 Erigeron canadensis HOM05D004490 ORTHO05D005353 5.3e-27 125.9 193 46.6
Eucgr.F04124 Eucalyptus grandis HOM05D004490 ORTHO05D005353 6.9e-27 125.6 195 44.1
BcaB01g01408 Brassica carinata HOM05D004490 ORTHO05D005353 2.0e-26 124.0 186 46.8
FAN07G2233 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.0e-26 124.0 217 43.3
FAN17G1649 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.0e-26 124.0 199 44.2
MD04G1003500 Malus domestica HOM05D004490 ORTHO05D005353 4.5e-26 122.9 217 41.5
CiPaw.15G081800 Carya illinoinensis HOM05D004490 ORTHO05D005353 3.8e-25 119.8 142 47.9
Nn5g27710 Nelumbo nucifera HOM05D004490 ORTHO05D005353 3.8e-25 119.8 197 44.7
AUR62022689 Chenopodium quinoa HOM05D004490 ORTHO05D005353 6.4e-25 119.0 157 49.7
Rhsim11G0059700 Rhododendron simsii HOM05D004490 ORTHO05D005353 1.1e-24 118.2 270 36.7
AUR62004649 Chenopodium quinoa HOM05D004490 ORTHO05D005353 3.2e-24 116.7 157 49.0
Cc00_g05790 Coffea canephora HOM05D004490 ORTHO05D005353 4.2e-24 116.3 157 47.8
SEGI_26294 Sequoiadendron giganteum HOM05D004490 ORTHO05D005353 4.6e-23 112.8 235 36.6
Ah.05g178090 Amaranthus hybridus HOM05D004490 ORTHO05D005353 6.0e-23 112.5 215 40.5
QL02p033840 Quercus lobata HOM05D004490 ORTHO05D005353 1.0e-22 111.7 249 37.3
Cpa.g.sc66.45 Carica papaya HOM05D004490 ORTHO05D005353 5.1e-22 109.4 141 46.8
Zm00001eb427930 Zea mays HOM05D004490 ORTHO05D005353 6.7e-22 109.0 187 39.0
Os01g0521500 Oryza sativa ssp. japonica HOM05D004490 ORTHO05D005353 8.7e-22 108.6 192 41.7
CDE08G1471 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 1.8e-19 100.9 194 40.7
ATR1098G081 Amborella trichopoda HOM05D004490 ORTHO05D008312 2.4e-19 100.5 190 40.0
BNapus_Darmor_BZH_scaffold_278p00030 Brassica napus HOM05D004490 ORTHO05D005353 3.4e-18 96.7 96 57.3
FvH4_3g44966 Fragaria vesca HOM05D004490 ORTHO05D005353 4.9e-17 92.8 222 33.3
SHI09001 Sapria himalayana HOM05D004490 ORTHO05D005353 8.4e-17 92.0 73 64.4
HPP92_020178 Vanilla planifolia HOM05D004490 ORTHO05D005353 1.4e-16 91.3 201 35.8
FAN11G3432 Fragaria x ananassa HOM05D004490 ORTHO05D005353 4.2e-16 89.7 189 34.9
Mapoly0003s0077 Marchantia polymorpha HOM05D004490 ORTHO05D005353 3.5e-15 86.7 191 37.7
HPP92_020159 Vanilla planifolia HOM05D004490 ORTHO05D005353 3.5e-15 86.7 212 33.0
FAN25G1655 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.0e-14 85.1 185 36.2
Pp3c14_7350 Physcomitrium patens HOM05D004490 ORTHO05D005353 5.1e-14 82.8 190 35.8
FAN11G3016 Fragaria x ananassa HOM05D004490 ORTHO05D005353 6.7e-14 82.4 196 35.2
CDE02G2953 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 3.3e-13 80.1 92 47.8
FvH4_3g44892 Fragaria vesca HOM05D004490 ORTHO05D005353 2.8e-12 77.0 186 33.9
RcHm_v2.0_Chr5g0081671 Rosa chinensis HOM05D004490 ORTHO05D005353 1.1e-11 75.1 89 50.6
FAN21G1156 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.8e-11 74.3 217 33.6
Sabra13G0096100 Salix brachista HOM05D004490 ORTHO05D005353 1.9e-08 64.3 129 35.7
RcHm_v2.0_Chr5g0082701 Rosa chinensis HOM05D004490 ORTHO05D005353 4.2e-08 63.2 69 49.3
RcHm_v2.0_Chr5g0082081 Rosa chinensis HOM05D004490 ORTHO05D005353 5.5e-08 62.8 59 55.9
FvH4_3g44931 Fragaria vesca HOM05D004490 ORTHO05D005353 1.3e-06 58.2 76 47.4


User provided reference genes

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