Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013367g0010 Nicotiana tabacum HOM05D009389 ORTHO05D004636 3.7e-60 234.6 111 100.0
Nitab4.5_0004274g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 2.1e-26 122.5 89 66.3
PGSC0003DMG400026063 Solanum tuberosum HOM05D009389 ORTHO05D004636 4.3e-16 88.2 89 46.1
Nitab4.5_0005955g0010 Nicotiana tabacum HOM05D009389 ORTHO05D004636 5.7e-16 87.8 107 43.9
Nitab4.5_0000780g0130 Nicotiana tabacum HOM05D012456 ORTHO05D000022 6.3e-15 84.3 107 38.3
Nitab4.5_0002972g0040 Nicotiana tabacum HOM05D012456 ORTHO05D004636 9.0e-14 80.5 107 37.4
PGSC0003DMG400014015 Solanum tuberosum HOM05D008381 ORTHO05D004636 9.0e-14 80.5 107 35.5
Nitab4.5_0002089g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.2e-13 80.1 78 50.0
Nitab4.5_0005472g0060 Nicotiana tabacum HOM05D004616 ORTHO05D005860 4.5e-13 78.2 103 38.8
Nitab4.5_0002346g0070 Nicotiana tabacum HOM05D011052 ORTHO05D004636 5.9e-13 77.8 109 39.4
Nitab4.5_0000593g0290 Nicotiana tabacum HOM05D009389 ORTHO05D004636 7.6e-13 77.4 100 39.0
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.0e-12 77.0 111 38.7
Nitab4.5_0001115g0120 Nicotiana tabacum HOM05D012456 ORTHO05D000022 1.0e-12 77.0 107 36.4
CAN.G681.24 Capsicum annuum HOM05D000016 ORTHO05D000109 2.2e-12 75.9 106 37.7
Nitab4.5_0010074g0040 Nicotiana tabacum HOM05D009389 ORTHO05D012243 6.5e-12 74.3 99 36.4
Nitab4.5_0002269g0040 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.9e-11 72.8 89 41.6
Nitab4.5_0001919g0190 Nicotiana tabacum HOM05D009389 ORTHO05D004636 3.2e-11 72.0 82 42.7
Nitab4.5_0002253g0030 Nicotiana tabacum HOM05D009389 ORTHO05D004636 3.2e-11 72.0 97 40.2
Nitab4.5_0002968g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 7.2e-11 70.9 105 37.1
Nitab4.5_0001319g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 9.4e-11 70.5 109 34.9
Nitab4.5_0000009g0190 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.6e-10 69.7 88 39.8
Nitab4.5_0000273g0050 Nicotiana tabacum HOM05D009389 ORTHO05D004636 2.1e-10 69.3 65 50.8
Nitab4.5_0005185g0060 Nicotiana tabacum HOM05D012456 ORTHO05D004636 2.1e-10 69.3 77 49.4
Peaxi162Scf00464g00024 Petunia axillaris HOM05D008381 ORTHO05D004636 3.6e-10 68.6 106 36.8
PGSC0003DMG400029619 Solanum tuberosum HOM05D008381 ORTHO05D004636 6.1e-10 67.8 89 38.2
Nitab4.5_0000163g0160 Nicotiana tabacum HOM05D008381 ORTHO05D004636 7.9e-10 67.4 109 36.7
Nitab4.5_0007618g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 7.9e-10 67.4 72 48.6
Nitab4.5_0002499g0140 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.0e-09 67.0 72 48.6
Nitab4.5_0004734g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.0e-09 67.0 110 34.5
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.4e-09 66.6 110 39.1
Nitab4.5_0000411g0070 Nicotiana tabacum HOM05D000003 ORTHO05D004636 1.4e-09 66.6 88 43.2
CAN.G108.54 Capsicum annuum HOM05D000003 ORTHO05D000006 2.3e-09 65.9 93 41.9
FvH4_3g23491 Fragaria vesca HOM05D000279 ORTHO05D000957 2.3e-09 65.9 115 34.8
arahy.Tifrunner.gnm1.ann1.XW6Y6R Arachis hypogaea HOM05D000003 ORTHO05D000022 3.0e-09 65.5 110 32.7
Nitab4.5_0010207g0010 Nicotiana tabacum HOM05D009389 ORTHO05D012243 3.0e-09 65.5 77 44.2
Sabra16G0000700 Salix brachista HOM05D060723 ORTHO05D000022 3.9e-09 65.1 112 37.5
Nitab4.5_0000629g0070 Nicotiana tabacum HOM05D009389 ORTHO05D012243 6.7e-09 64.3 82 41.5
Sabra07G0074300 Salix brachista HOM05D000609 ORTHO05D000462 6.7e-09 64.3 111 35.1
Peaxi162Scf00170g00710 Petunia axillaris HOM05D005774 ORTHO05D006516 1.5e-08 63.2 106 36.8
CAN.G1264.3 Capsicum annuum HOM05D002076 ORTHO05D002087 1.9e-08 62.8 108 31.5
Nitab4.5_0009177g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.9e-08 62.8 96 35.4
RcHm_v2.0_Chr5g0041481 Rosa chinensis HOM05D000279 ORTHO05D000498 1.9e-08 62.8 115 33.9
Nitab4.5_0002028g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.3e-08 62.0 99 37.4
Peaxi162Scf00049g00029 Petunia axillaris HOM05D005774 ORTHO05D006516 3.3e-08 62.0 80 38.8
Peaxi162Scf00130g00114 Petunia axillaris HOM05D013830 ORTHO05D004636 3.3e-08 62.0 105 34.3
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 4.3e-08 61.6 109 36.7
CAN.G1088.1 Capsicum annuum HOM05D000024 ORTHO05D000006 4.3e-08 61.6 93 37.6
Nitab4.5_0001519g0220 Nicotiana tabacum HOM05D009389 ORTHO05D004636 4.3e-08 61.6 70 45.7
Nitab4.5_0013383g0010 Nicotiana tabacum HOM05D012456 ORTHO05D004636 4.3e-08 61.6 77 40.3
Nitab4.5_0001032g0100 Nicotiana tabacum HOM05D008381 ORTHO05D004636 9.7e-08 60.5 60 53.3
Nitab4.5_0003210g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 9.7e-08 60.5 78 41.0
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 9.7e-08 60.5 110 30.9
Nitab4.5_0001175g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.3e-07 60.1 106 32.1
Nitab4.5_0011109g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.3e-07 60.1 82 39.0
Solyc12g040255.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 1.3e-07 60.1 74 41.9
PGSC0003DMG400019143 Solanum tuberosum HOM05D012456 ORTHO05D000022 1.3e-07 60.1 77 39.0
Nitab4.5_0009909g0030 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.7e-07 59.7 108 35.2
arahy.Tifrunner.gnm1.ann1.WYFF13 Arachis hypogaea HOM05D000155 ORTHO05D000022 2.2e-07 59.3 110 33.6
Nitab4.5_0001119g0130 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.2e-07 59.3 81 43.2
Peaxi162Scf00000g56011 Petunia axillaris HOM05D008306 ORTHO05D004636 2.2e-07 59.3 85 35.3
MBI15_g03060_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.8e-07 58.9 57 47.4
QL02p017925 Quercus lobata HOM05D000003 ORTHO05D000022 2.8e-07 58.9 73 41.1
QL07p034964 Quercus lobata HOM05D000053 ORTHO05D000448 2.8e-07 58.9 109 31.2
Atru.chr2.2394 Acer truncatum HOM05D000003 ORTHO05D000022 3.7e-07 58.5 97 35.1
Atru.chr5.1996 Acer truncatum HOM05D000003 ORTHO05D000022 3.7e-07 58.5 109 32.1
Nitab4.5_0000574g0180 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.7e-07 58.5 83 43.4
Actinidia31778 Actinidia chinensis HOM05D000155 ORTHO05D000022 4.8e-07 58.2 106 32.1
COL.COLO4_30280 Corchorus olitorius HOM05D000155 ORTHO05D000022 4.8e-07 58.2 111 33.3
Nitab4.5_0002091g0100 Nicotiana tabacum HOM05D009389 ORTHO05D012243 4.8e-07 58.2 79 40.5
Sabra09G0061300 Salix brachista HOM05D000003 ORTHO05D000022 4.8e-07 58.2 110 32.7
arahy.Tifrunner.gnm1.ann1.I6PHI5 Arachis hypogaea HOM05D000003 ORTHO05D000022 6.3e-07 57.8 111 31.5
EL10Ac2g03884 Beta vulgaris HOM05D016861 ORTHO05D018265 6.3e-07 57.8 107 31.8
Sabra01G0106600 Salix brachista HOM05D000003 ORTHO05D000022 8.2e-07 57.4 110 32.7
Nitab4.5_0004325g0080 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.1e-06 57.0 100 36.0
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-06 56.6 98 37.8
arahy.Tifrunner.gnm1.ann1.3ZGA1D Arachis hypogaea HOM05D000155 ORTHO05D000022 1.4e-06 56.6 110 33.6
Nitab4.5_0000685g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.4e-06 56.6 74 41.9
RcHm_v2.0_Chr2g0127141 Rosa chinensis HOM05D000003 ORTHO05D000022 1.4e-06 56.6 112 35.7
TPR.G1810 Trifolium pratense HOM05D000290 ORTHO05D007415 1.4e-06 56.6 104 28.8
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-06 56.2 109 32.1
Nitab4.5_0004988g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.8e-06 56.2 109 33.0
QL02p099447 Quercus lobata HOM05D000003 ORTHO05D000022 1.8e-06 56.2 78 43.6
Atru.chr3.1552 Acer truncatum HOM05D000003 ORTHO05D000022 2.4e-06 55.8 100 35.0
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-06 55.8 114 31.6
Nitab4.5_0001468g0150 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.4e-06 55.8 107 34.6
Nitab4.5_0016171g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.4e-06 55.8 98 35.7
QL02p025978 Quercus lobata HOM05D000003 ORTHO05D000022 2.4e-06 55.8 93 38.7
RcHm_v2.0_Chr2g0146161 Rosa chinensis HOM05D000003 ORTHO05D000022 2.4e-06 55.8 113 31.0
Atru.chr5.1534 Acer truncatum HOM05D000003 ORTHO05D000167 3.1e-06 55.5 109 31.2
CAN.G79.41 Capsicum annuum HOM05D001795 ORTHO05D001741 3.1e-06 55.5 61 42.6
Lj4g0002379 Lotus japonicus HOM05D000003 ORTHO05D000022 3.1e-06 55.5 108 31.5
Nitab4.5_0004123g0040 Nicotiana tabacum HOM05D008306 ORTHO05D004636 3.1e-06 55.5 104 29.8
Nitab4.5_0007897g0030 Nicotiana tabacum HOM05D008306 ORTHO05D004636 3.1e-06 55.5 95 34.7
Atru.chr13.1101 Acer truncatum HOM05D000003 ORTHO05D000022 4.1e-06 55.1 110 31.8
Atru.chr4.172 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-06 55.1 110 30.0
VMungo0647G2109 Vigna mungo HOM05D000155 ORTHO05D000022 4.1e-06 55.1 110 30.9
Atru.chr10.557 Acer truncatum HOM05D000003 ORTHO05D000022 5.3e-06 54.7 106 33.0
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-06 54.7 111 33.3
Atru.chr12.385 Acer truncatum HOM05D000003 ORTHO05D000022 5.3e-06 54.7 106 33.0
FvH4_5g34262 Fragaria vesca HOM05D000003 ORTHO05D000022 5.3e-06 54.7 112 31.2
QL10p004071 Quercus lobata HOM05D001287 ORTHO05D001226 5.3e-06 54.7 108 33.3
Atru.chr1.2471 Acer truncatum HOM05D000003 ORTHO05D000022 6.9e-06 54.3 94 30.9
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.9e-06 54.3 109 31.2
MD11G1210000 Malus domestica HOM05D000279 ORTHO05D000498 6.9e-06 54.3 114 31.6
Nitab4.5_0002177g0030 Nicotiana tabacum HOM05D008306 ORTHO05D004636 6.9e-06 54.3 83 37.3
Nitab4.5_0002946g0020 Nicotiana tabacum HOM05D011052 ORTHO05D004636 6.9e-06 54.3 66 43.9
QL04p002496 Quercus lobata HOM05D014996 ORTHO05D000022 6.9e-06 54.3 90 31.1
Nitab4.5_0000925g0050 Nicotiana tabacum HOM05D008381 ORTHO05D004636 9.1e-06 53.9 81 37.0
Peaxi162Scf00100g00073 Petunia axillaris HOM05D008381 ORTHO05D004636 9.1e-06 53.9 49 49.0
QL01p016224 Quercus lobata HOM05D000155 ORTHO05D000022 9.1e-06 53.9 97 34.0
RcHm_v2.0_Chr2g0152401 Rosa chinensis HOM05D000003 ORTHO05D000022 9.1e-06 53.9 113 30.1


User provided reference genes

Program Settings