Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 5.2e-198 694.1 333 100.0
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 6.6e-193 677.2 333 97.0
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.5e-192 676.0 333 98.5
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 1.5e-192 676.0 333 97.0
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 7.2e-192 673.7 333 96.1
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.9e-188 661.0 330 95.2
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.8e-187 659.1 330 95.5
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.2e-186 656.4 336 94.3
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 1.0e-185 653.3 330 94.2
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 6.8e-174 614.0 335 87.2
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 2.6e-173 612.1 334 86.2
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 3.4e-173 611.7 322 89.4
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 5.8e-173 610.9 320 90.3
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 5.8e-173 610.9 334 85.6
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 7.5e-173 610.5 324 86.4
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 9.8e-173 610.1 320 89.1
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 3.7e-172 608.2 334 86.8
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 1.9e-171 605.9 326 87.1
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 2.4e-171 605.5 321 89.4
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.1e-171 604.7 330 85.5
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 5.4e-171 604.4 328 85.4
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 7.0e-171 604.0 319 87.5
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 9.2e-171 603.6 327 86.9
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.2e-170 603.2 330 85.8
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.2e-170 603.2 325 86.8
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 3.5e-170 601.7 337 84.9
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 6.0e-170 600.9 329 85.7
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.0e-169 600.1 325 86.2
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 1.0e-169 600.1 322 87.9
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.3e-169 599.7 320 86.9
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 3.0e-169 598.6 318 87.4
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 6.6e-169 597.4 333 85.3
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 6.6e-169 597.4 322 85.7
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 6.6e-169 597.4 315 89.2
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 8.6e-169 597.0 339 84.1
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.1e-168 596.7 315 87.3
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.1e-168 596.7 325 85.8
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.1e-168 596.7 325 85.8
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 1.1e-168 596.7 333 84.7
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.1e-168 596.7 324 86.7
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 2.5e-168 595.5 333 84.7
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 3.3e-168 595.1 329 85.7
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 5.6e-168 594.3 325 86.5
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 9.5e-168 593.6 329 86.3
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 9.5e-168 593.6 333 84.4
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 1.6e-167 592.8 325 86.2
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.6e-167 592.8 325 86.2
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 4.7e-167 591.3 324 86.4
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 6.2e-167 590.9 319 86.2
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 6.2e-167 590.9 319 86.2
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 1.1e-166 590.1 333 85.0
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.4e-166 589.7 329 85.4
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 3.1e-166 588.6 323 86.7
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 3.1e-166 588.6 325 85.5
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 5.2e-166 587.8 318 86.2
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 5.2e-166 587.8 314 86.6
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 5.2e-166 587.8 327 83.8
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 6.8e-166 587.4 335 83.6
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 8.9e-166 587.0 317 85.8
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 1.2e-165 586.6 320 84.4
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.6e-165 585.5 323 86.4
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 4.4e-165 584.7 313 86.3
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 7.5e-165 583.9 312 86.9
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 1.7e-164 582.8 320 85.9
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 8.3e-164 580.5 323 85.8
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 1.4e-163 579.7 310 87.4
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 1.9e-163 579.3 326 83.4
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 2.4e-163 578.9 317 84.2
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 3.2e-163 578.6 329 82.7
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 3.2e-163 578.6 324 84.3
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 3.2e-163 578.6 335 82.4
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 1.6e-162 576.2 325 83.1
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 2.7e-162 575.5 329 83.6
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 2.7e-162 575.5 322 83.2
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 3.5e-162 575.1 330 82.4
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 7.8e-162 573.9 313 86.6
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 1.0e-161 573.5 325 82.2
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 3.9e-161 571.6 330 81.8
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 3.9e-161 571.6 330 81.8
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 6.6e-161 570.9 327 81.7
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 8.6e-161 570.5 315 84.4
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 8.6e-161 570.5 319 83.1
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 1.1e-160 570.1 327 82.3
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 1.1e-160 570.1 321 85.4
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 1.9e-160 569.3 320 82.8
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 2.5e-160 568.9 320 82.2
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 3.3e-160 568.5 325 82.5
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 4.3e-160 568.2 319 82.8
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 4.3e-160 568.2 327 82.0
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 4.3e-160 568.2 327 82.0
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 7.3e-160 567.4 317 83.0
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 1.2e-159 566.6 387 73.4
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 4.7e-159 564.7 329 81.2
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 3.1e-158 562.0 327 81.0
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 3.1e-158 562.0 327 81.0
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 4.0e-158 561.6 277 96.0
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 4.0e-158 561.6 319 82.4
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 6.8e-158 560.8 319 81.8
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 8.9e-158 560.5 317 82.6
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 3.4e-157 558.5 332 79.8
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 9.9e-157 557.0 332 79.5
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 9.9e-157 557.0 319 80.6
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 8.4e-156 553.9 319 81.8
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.2e-155 551.6 312 84.3
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 4.3e-152 541.6 321 79.1
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 1.2e-151 540.0 352 74.7
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 1.7e-148 529.6 329 74.8
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 6.4e-148 527.7 317 76.7
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 2.1e-146 522.7 299 80.9
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 1.3e-145 520.0 313 76.0
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 5.1e-145 518.1 279 85.7
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 1.8e-142 509.6 298 77.5
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 2.4e-142 509.2 279 86.0
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 1.1e-136 490.3 319 71.5
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 2.5e-131 472.6 308 68.8
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.3e-129 466.8 342 63.5
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.3e-129 466.8 342 63.5
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 3.0e-129 465.7 333 69.4
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 2.5e-128 462.6 251 84.1
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 6.9e-126 454.5 306 67.6
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 6.9e-118 427.9 307 62.9
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 2.6e-117 426.0 229 87.8
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 8.8e-105 384.4 316 57.9
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 5.0e-100 368.6 242 71.5
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 1.6e-98 363.6 215 78.6
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 9.4e-91 337.8 324 50.3
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 4.2e-83 312.4 351 44.2
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 2.8e-71 273.1 364 40.4
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 3.5e-53 213.0 123 75.6
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 2.4e-33 147.1 82 86.6
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 2.4e-30 137.1 89 76.4
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.2e-22 109.8 84 67.9
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 8.7e-20 102.1 68 70.6
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 4.9e-15 86.3 52 78.8
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 7.1e-14 82.4 56 67.9
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 5.1e-12 76.3 48 75.0
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 5.1e-12 76.3 41 80.5
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 2.2e-07 60.8 42 59.5


User provided reference genes

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